RNA–Protein interactions for RNA: ENST00000514231.1

PDE4D-221, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-221ENST00000514231 PAK2Q13177 524 aa8.8□□□□□ -1
PDE4D-221ENST00000514231 RNF111Q6ZNA4 994 aa8.8□□□□□ -1
PDE4D-221ENST00000514231 OXR1Q8N573 874 aa8.8□□□□□ -1
PDE4D-221ENST00000514231 ACRP10323 421 aa8.79□□□□□ -1
PDE4D-221ENST00000514231 TMC3Q7Z5M5 1100 aa8.79□□□□□ -1
PDE4D-221ENST00000514231 NT5DC4Q86YG4 428 aa8.79□□□□□ -1
PDE4D-221ENST00000514231 SPPL2CQ8IUH8 684 aa8.79□□□□□ -1
PDE4D-221ENST00000514231 TCTN2Q96GX1 697 aa8.79□□□□□ -1
PDE4D-221ENST00000514231 LIN37Q96GY3 246 aaPredicted RBP8.79□□□□□ -1
PDE4D-221ENST00000514231 PRDM14Q9GZV8 571 aa8.79□□□□□ -1
PDE4D-221ENST00000514231 SP110Q9HB58 689 aa8.79□□□□□ -1
PDE4D-221ENST00000514231 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.79□□□□□ -1
PDE4D-221ENST00000514231 SIGLEC6O43699 453 aa8.78□□□□□ -1
PDE4D-221ENST00000514231 C8AP07357 584 aa8.78□□□□□ -1
PDE4D-221ENST00000514231 DUSP4Q13115 394 aa8.78□□□□□ -1
PDE4D-221ENST00000514231 SNW1Q13573 536 aaKnown RBP8.78□□□□□ -1
PDE4D-221ENST00000514231 NR0B2Q15466 257 aa8.78□□□□□ -1
PDE4D-221ENST00000514231 MLANAQ16655 118 aa8.78□□□□□ -1
PDE4D-221ENST00000514231 LILRA2Q8N149 483 aa8.78□□□□□ -1
PDE4D-221ENST00000514231 LINC00116Q8NCU8 138 aa8.78□□□□□ -1
PDE4D-221ENST00000514231 RASGRP4Q8TDF6 673 aa8.78□□□□□ -1
PDE4D-221ENST00000514231 ZNF512BQ96KM6 892 aaPredicted RBP8.78□□□□□ -1
PDE4D-221ENST00000514231 SUCOQ9UBS9 1254 aaKnown RBP8.78□□□□□ -1
PDE4D-221ENST00000514231 PPT2Q9UMR5 302 aa8.78□□□□□ -1
PDE4D-221ENST00000514231 FITM1A5D6W6 292 aa8.77□□□□□ -1.01
PDE4D-221ENST00000514231 PCBP3P57721 371 aaKnown RBP8.77□□□□□ -1.01
PDE4D-221ENST00000514231 MESP2Q0VG99 397 aa8.77□□□□□ -1.01
PDE4D-221ENST00000514231 AUHQ13825 339 aaKnown RBP8.77□□□□□ -1.01
PDE4D-221ENST00000514231 FBXW10Q5XX13 1052 aa8.77□□□□□ -1.01
PDE4D-221ENST00000514231 MPZL3Q6UWV2 235 aa8.77□□□□□ -1.01
PDE4D-221ENST00000514231 LINC01599Q8WXQ3 324 aa8.77□□□□□ -1.01
PDE4D-221ENST00000514231 FAM84AQ96KN4 292 aa8.77□□□□□ -1.01
PDE4D-221ENST00000514231 KRTAP9-9Q9BYP9 154 aa8.77□□□□□ -1.01
PDE4D-221ENST00000514231 KRTAP9-4Q9BYQ2 154 aa8.77□□□□□ -1.01
PDE4D-221ENST00000514231 MKRN2Q9H000 416 aaKnown RBP8.77□□□□□ -1.01
PDE4D-221ENST00000514231 GINM1Q9NU53 330 aa8.77□□□□□ -1.01
PDE4D-221ENST00000514231 PRR13Q9NZ81 148 aa8.77□□□□□ -1.01
PDE4D-221ENST00000514231 PRAMEF1O95521 474 aa8.76□□□□□ -1.01
PDE4D-221ENST00000514231 SOX9P48436 509 aa8.76□□□□□ -1.01
PDE4D-221ENST00000514231 CHRNEQ04844 493 aa8.76□□□□□ -1.01
PDE4D-221ENST00000514231 ZNF648Q5T619 568 aaPredicted RBP8.76□□□□□ -1.01
PDE4D-221ENST00000514231 C9orf131Q5VYM1 1079 aa8.76□□□□□ -1.01
PDE4D-221ENST00000514231 TCFL5Q9UL49 500 aa8.76□□□□□ -1.01
PDE4D-221ENST00000514231 CCDC9Q9Y3X0 531 aaKnown RBP8.76□□□□□ -1.01
PDE4D-221ENST00000514231 PCDHB12Q9Y5F1 795 aa8.76□□□□□ -1.01
PDE4D-221ENST00000514231 SSU72P8A0A1W2PR75 194 aa8.75□□□□□ -1.01
PDE4D-221ENST00000514231 GUCY2CP25092 1073 aa8.75□□□□□ -1.01
PDE4D-221ENST00000514231 PMS1P54277 932 aaKnown RBP8.75□□□□□ -1.01
PDE4D-221ENST00000514231 ANKRD39Q53RE8 183 aa8.75□□□□□ -1.01
PDE4D-221ENST00000514231 ANKS4BQ8N8V4 417 aa8.75□□□□□ -1.01
PDE4D-221ENST00000514231 GPRASP2Q96D09 838 aa8.75□□□□□ -1.01
PDE4D-221ENST00000514231 CRBNQ96SW2 442 aa8.75□□□□□ -1.01
PDE4D-221ENST00000514231 CHST7Q9NS84 486 aa8.75□□□□□ -1.01
PDE4D-221ENST00000514231 EBF1Q9UH73 591 aa8.75□□□□□ -1.01
PDE4D-221ENST00000514231 FBXL21Q9UKT6 434 aa8.75□□□□□ -1.01
PDE4D-221ENST00000514231 EFR3BQ9Y2G0 817 aa8.75□□□□□ -1.01
PDE4D-221ENST00000514231 RPL10P27635 214 aaKnown RBP8.74□□□□□ -1.01
PDE4D-221ENST00000514231 GJA8P48165 433 aa8.74□□□□□ -1.01
PDE4D-221ENST00000514231 SNX17Q15036 470 aa8.74□□□□□ -1.01
PDE4D-221ENST00000514231 UNC5AQ6ZN44 842 aa8.74□□□□□ -1.01
PDE4D-221ENST00000514231 PRR23BQ6ZRT6 265 aa8.74□□□□□ -1.01
PDE4D-221ENST00000514231 KSR1Q8IVT5 923 aa8.74□□□□□ -1.01
PDE4D-221ENST00000514231 C7orf61Q8IZ16 206 aa8.74□□□□□ -1.01
PDE4D-221ENST00000514231 BHLHE22Q8NFJ8 381 aaPredicted RBP8.74□□□□□ -1.01
PDE4D-221ENST00000514231 SMARCC1Q92922 1105 aaPredicted RBP8.74□□□□□ -1.01
PDE4D-221ENST00000514231 SLC38A3Q99624 504 aa8.74□□□□□ -1.01
PDE4D-221ENST00000514231 G6PC3Q9BUM1 346 aa8.74□□□□□ -1.01
PDE4D-221ENST00000514231 FOXP3Q9BZS1 431 aa8.74□□□□□ -1.01
PDE4D-221ENST00000514231 TGIF2Q9GZN2 237 aa8.74□□□□□ -1.01
PDE4D-221ENST00000514231 C19orf44Q9H6X5 657 aa8.74□□□□□ -1.01
PDE4D-221ENST00000514231 C9IYK1 514 aa8.73□□□□□ -1.01
PDE4D-221ENST00000514231 TRHRP34981 398 aaPredicted RBP8.73□□□□□ -1.01
PDE4D-221ENST00000514231 RUFY4Q6ZNE9 571 aa8.73□□□□□ -1.01
PDE4D-221ENST00000514231 LSRQ86X29 649 aaPredicted RBP8.73□□□□□ -1.01
PDE4D-221ENST00000514231 FAM86C2PA6NEL3 165 aa8.72□□□□□ -1.01
PDE4D-221ENST00000514231 SYPP08247 313 aa8.72□□□□□ -1.01
PDE4D-221ENST00000514231 EIF6P56537 245 aaKnown RBP8.72□□□□□ -1.01
PDE4D-221ENST00000514231 WAPLQ7Z5K2 1190 aa8.72□□□□□ -1.01
PDE4D-221ENST00000514231 CCDC144CPQ8IYA2 1237 aa8.72□□□□□ -1.01
PDE4D-221ENST00000514231 CWC22Q9HCG8 908 aaKnown RBP8.72□□□□□ -1.01
PDE4D-221ENST00000514231 GFOD1Q9NXC2 390 aa8.72□□□□□ -1.01
PDE4D-221ENST00000514231 ZMYM5Q9UJ78 669 aa8.72□□□□□ -1.01
PDE4D-221ENST00000514231 MINPP1Q9UNW1 487 aa8.72□□□□□ -1.01
PDE4D-221ENST00000514231 TMEM82A0PJX8 343 aa8.71□□□□□ -1.02
PDE4D-221ENST00000514231 KIR2DL1P43626 348 aaPredicted RBP8.71□□□□□ -1.02
PDE4D-221ENST00000514231 KIR2DL2P43627 348 aaPredicted RBP8.71□□□□□ -1.02
PDE4D-221ENST00000514231 GIPRP48546 466 aa8.71□□□□□ -1.02
PDE4D-221ENST00000514231 ZYXQ15942 572 aaKnown RBP8.71□□□□□ -1.02
PDE4D-221ENST00000514231 BBS9Q3SYG4 887 aa8.71□□□□□ -1.02
PDE4D-221ENST00000514231 OR6P1Q8NGX9 317 aa8.71□□□□□ -1.02
PDE4D-221ENST00000514231 RNF32Q9H0A6 362 aa8.71□□□□□ -1.02
PDE4D-221ENST00000514231 ZNF214Q9UL59 606 aaPredicted RBP8.71□□□□□ -1.02
PDE4D-221ENST00000514231 KRTAP4-8A0A0G2JLE6 195 aa8.7□□□□□ -1.02
PDE4D-221ENST00000514231 SHOXO15266 292 aa8.7□□□□□ -1.02
PDE4D-221ENST00000514231 ENDOUP21128 410 aaKnown RBP8.7□□□□□ -1.02
PDE4D-221ENST00000514231 BMP8BP34820 402 aa8.7□□□□□ -1.02
PDE4D-221ENST00000514231 PKN1Q16512 942 aa8.7□□□□□ -1.02
PDE4D-221ENST00000514231 TIGD5Q53EQ6 642 aa8.7□□□□□ -1.02
PDE4D-221ENST00000514231 CCDC81Q6ZN84 652 aa8.7□□□□□ -1.02
PDE4D-221ENST00000514231 SEC16BQ96JE7 1060 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms