RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 TM6SF1Q9BZW5 370 aa13.28□□□□□ -0.28
HTT-213ENST00000513806 SH2D4AQ9H788 454 aa13.28□□□□□ -0.28
HTT-213ENST00000513806 UPF2Q9HAU5 1272 aaKnown RBP13.28□□□□□ -0.28
HTT-213ENST00000513806 PDRG1Q9NUG6 133 aa13.28□□□□□ -0.28
HTT-213ENST00000513806 A0A0G2JMZ2 1700 aa13.27□□□□□ -0.28
HTT-213ENST00000513806 KLF18A0A0U1RQI7 1052 aa13.27□□□□□ -0.29
HTT-213ENST00000513806 EIF5BO60841 1220 aaKnown RBP13.27□□□□□ -0.29
HTT-213ENST00000513806 TRPA1O75762 1119 aa13.27□□□□□ -0.29
HTT-213ENST00000513806 PDHBP11177 359 aa13.27□□□□□ -0.29
HTT-213ENST00000513806 TAL1P17542 331 aaPredicted RBP13.27□□□□□ -0.29
HTT-213ENST00000513806 SLC16A2P36021 539 aa13.27□□□□□ -0.29
HTT-213ENST00000513806 NEK4P51957 841 aa13.27□□□□□ -0.29
HTT-213ENST00000513806 SART3Q15020 963 aaKnown RBP13.27□□□□□ -0.29
HTT-213ENST00000513806 ANKRD23Q86SG2 305 aa13.27□□□□□ -0.29
HTT-213ENST00000513806 ZNF654Q8IZM8 581 aa13.27□□□□□ -0.29
HTT-213ENST00000513806 GMCL1P1Q8NEA9 526 aa13.27□□□□□ -0.29
HTT-213ENST00000513806 P2RX7Q99572 595 aaKnown RBP13.27□□□□□ -0.29
HTT-213ENST00000513806 ASCC2Q9H1I8 757 aaPredicted RBP13.27□□□□□ -0.29
HTT-213ENST00000513806 RNF186Q9NXI6 227 aa13.27□□□□□ -0.29
HTT-213ENST00000513806 MGAMO43451 1857 aa13.27□□□□□ -0.29
HTT-213ENST00000513806 CASP8AP2Q9UKL3 1982 aa13.27□□□□□ -0.29
HTT-213ENST00000513806 DOCK3Q8IZD9 2030 aa13.27□□□□□ -0.29
HTT-213ENST00000513806 CCDC69A6NI79 296 aa13.26□□□□□ -0.29
HTT-213ENST00000513806 USP17L15C9J2P7 530 aa13.26□□□□□ -0.29
HTT-213ENST00000513806 USP17L13C9JLJ4 530 aa13.26□□□□□ -0.29
HTT-213ENST00000513806 TMEM232C9JQI7 657 aa13.26□□□□□ -0.29
HTT-213ENST00000513806 USP17L11C9JVI0 530 aa13.26□□□□□ -0.29
HTT-213ENST00000513806 USP17L18D6R9N7 530 aa13.26□□□□□ -0.29
HTT-213ENST00000513806 USP17L22D6RA61 530 aa13.26□□□□□ -0.29
HTT-213ENST00000513806 USP17L17D6RBQ6 530 aa13.26□□□□□ -0.29
HTT-213ENST00000513806 USP17L19D6RCP7 530 aa13.26□□□□□ -0.29
HTT-213ENST00000513806 USP17L20D6RJB6 530 aa13.26□□□□□ -0.29
HTT-213ENST00000513806 WDR46O15213 610 aaKnown RBP13.26□□□□□ -0.29
HTT-213ENST00000513806 HMGB1P09429 215 aaKnown RBP13.26□□□□□ -0.29
HTT-213ENST00000513806 BMP3P12645 472 aa13.26□□□□□ -0.29
HTT-213ENST00000513806 SLC1A4P43007 532 aa13.26□□□□□ -0.29
HTT-213ENST00000513806 AK2P54819 239 aa13.26□□□□□ -0.29
HTT-213ENST00000513806 USP17L24Q0WX57 530 aa13.26□□□□□ -0.29
HTT-213ENST00000513806 CRHR2Q13324 411 aa13.26□□□□□ -0.29
HTT-213ENST00000513806 TAF1CQ15572 869 aaPredicted RBP13.26□□□□□ -0.29
HTT-213ENST00000513806 CCDC178Q5BJE1 867 aa13.26□□□□□ -0.29
HTT-213ENST00000513806 CATSPERGQ6ZRH7 1159 aa13.26□□□□□ -0.29
HTT-213ENST00000513806 MICU3Q86XE3 530 aa13.26□□□□□ -0.29
HTT-213ENST00000513806 CMTR1Q8N1G2 835 aaKnown RBP13.26□□□□□ -0.29
HTT-213ENST00000513806 WDR19Q8NEZ3 1342 aa13.26□□□□□ -0.29
HTT-213ENST00000513806 IL17RAQ96F46 866 aa13.26□□□□□ -0.29
HTT-213ENST00000513806 UBA5Q9GZZ9 404 aa13.26□□□□□ -0.29
HTT-213ENST00000513806 CPA4Q9UI42 421 aa13.26□□□□□ -0.29
HTT-213ENST00000513806 PPFIA3O75145 1194 aa13.25□□□□□ -0.29
HTT-213ENST00000513806 FLOT1O75955 427 aa13.25□□□□□ -0.29
HTT-213ENST00000513806 CD2BP2O95400 341 aaKnown RBP13.25□□□□□ -0.29
HTT-213ENST00000513806 LARGE1O95461 756 aa13.25□□□□□ -0.29
HTT-213ENST00000513806 LIFRP42702 1097 aa13.25□□□□□ -0.29
HTT-213ENST00000513806 IRX3P78415 501 aaPredicted RBP13.25□□□□□ -0.29
HTT-213ENST00000513806 ZNF543Q08ER8 600 aa13.25□□□□□ -0.29
HTT-213ENST00000513806 IKQ13123 557 aaPredicted RBP13.25□□□□□ -0.29
HTT-213ENST00000513806 STK3Q13188 491 aa13.25□□□□□ -0.29
HTT-213ENST00000513806 SLC35G1Q2M3R5 365 aa13.25□□□□□ -0.29
HTT-213ENST00000513806 PPP4R3BQ5MIZ7 849 aa13.25□□□□□ -0.29
HTT-213ENST00000513806 CATIPQ7Z7H3 387 aa13.25□□□□□ -0.29
HTT-213ENST00000513806 DCAF4Q8WV16 495 aa13.25□□□□□ -0.29
HTT-213ENST00000513806 LPAR1Q92633 364 aa13.25□□□□□ -0.29
HTT-213ENST00000513806 KIFC2Q96AC6 838 aa13.25□□□□□ -0.29
HTT-213ENST00000513806 ATG4CQ96DT6 458 aa13.25□□□□□ -0.29
HTT-213ENST00000513806 GMCL1Q96IK5 515 aa13.25□□□□□ -0.29
HTT-213ENST00000513806 MAD2L2Q9UI95 211 aa13.25□□□□□ -0.29
HTT-213ENST00000513806 ZNFX1Q9P2E3 1918 aaKnown RBP13.24□□□□□ -0.29
HTT-213ENST00000513806 SPDYE16A6NNV3 312 aaPredicted RBP13.24□□□□□ -0.29
HTT-213ENST00000513806 PLEKHA8P1O95397 391 aa13.24□□□□□ -0.29
HTT-213ENST00000513806 SNHG28P0DPA3 235 aa13.24□□□□□ -0.29
HTT-213ENST00000513806 OSBPP22059 807 aa13.24□□□□□ -0.29
HTT-213ENST00000513806 HOXA7P31268 230 aaPredicted RBP13.24□□□□□ -0.29
HTT-213ENST00000513806 NT5C2P49902 561 aa13.24□□□□□ -0.29
HTT-213ENST00000513806 INHBEP58166 350 aa13.24□□□□□ -0.29
HTT-213ENST00000513806 CCT2P78371 535 aaKnown RBP13.24□□□□□ -0.29
HTT-213ENST00000513806 TROAPQ12815 778 aa13.24□□□□□ -0.29
HTT-213ENST00000513806 GRM4Q14833 912 aa13.24□□□□□ -0.29
HTT-213ENST00000513806 APOA5Q6Q788 366 aa13.24□□□□□ -0.29
HTT-213ENST00000513806 NBPF11Q86T75 865 aa13.24□□□□□ -0.29
HTT-213ENST00000513806 SGMS1Q86VZ5 419 aa13.24□□□□□ -0.29
HTT-213ENST00000513806 PIBF1Q8WXW3 757 aa13.24□□□□□ -0.29
HTT-213ENST00000513806 PAGR1Q9BTK6 254 aa13.24□□□□□ -0.29
HTT-213ENST00000513806 AGXT2Q9BYV1 514 aa13.24□□□□□ -0.29
HTT-213ENST00000513806 TXNRD2Q9NNW7 524 aa13.24□□□□□ -0.29
HTT-213ENST00000513806 SLC12A7Q9Y666 1083 aa13.24□□□□□ -0.29
HTT-213ENST00000513806 ADGRA2Q96PE1 1338 aa13.23□□□□□ -0.29
HTT-213ENST00000513806 GOLGA8BA8MQT2 603 aa13.23□□□□□ -0.29
HTT-213ENST00000513806 CNMDO75829 334 aa13.23□□□□□ -0.29
HTT-213ENST00000513806 PARP1P09874 1014 aaKnown RBP13.23□□□□□ -0.29
HTT-213ENST00000513806 CDC27P30260 824 aa13.23□□□□□ -0.29
HTT-213ENST00000513806 HERVK_113P62684 666 aa13.23□□□□□ -0.29
HTT-213ENST00000513806 CCDC82Q8N4S0 544 aa13.23□□□□□ -0.29
HTT-213ENST00000513806 ANKRD13CQ8N6S4 541 aa13.23□□□□□ -0.29
HTT-213ENST00000513806 SLF1Q9BQI6 1058 aa13.23□□□□□ -0.29
HTT-213ENST00000513806 NCOA5Q9HCD5 579 aaKnown RBP13.23□□□□□ -0.29
HTT-213ENST00000513806 VAT1LQ9HCJ6 419 aa13.23□□□□□ -0.29
HTT-213ENST00000513806 WBP1LQ9NX94 342 aa13.23□□□□□ -0.29
HTT-213ENST00000513806 BTBD7Q9P203 1132 aa13.23□□□□□ -0.29
HTT-213ENST00000513806 TPCN1Q9ULQ1 816 aa13.23□□□□□ -0.29
HTT-213ENST00000513806 HPS5Q9UPZ3 1129 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms