RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 SIGLEC6O43699 453 aa9.71□□□□□ -0.86
TRAPPC11-210ENST00000513600 AUHQ13825 339 aaKnown RBP9.71□□□□□ -0.86
TRAPPC11-210ENST00000513600 TTC6Q86TZ1 520 aa9.71□□□□□ -0.86
TRAPPC11-210ENST00000513600 VPS37DQ86XT2 251 aa9.71□□□□□ -0.86
TRAPPC11-210ENST00000513600 C19orf73Q9NVV2 129 aa9.71□□□□□ -0.86
TRAPPC11-210ENST00000513600 RNF114Q9Y508 228 aa9.71□□□□□ -0.86
TRAPPC11-210ENST00000513600 SLC12A7Q9Y666 1083 aa9.71□□□□□ -0.86
TRAPPC11-210ENST00000513600 SNW1Q13573 536 aaKnown RBP9.7□□□□□ -0.86
TRAPPC11-210ENST00000513600 GNL2Q13823 731 aaKnown RBP9.7□□□□□ -0.86
TRAPPC11-210ENST00000513600 BBS9Q3SYG4 887 aa9.7□□□□□ -0.86
TRAPPC11-210ENST00000513600 RALGPS1Q5JS13 557 aa9.7□□□□□ -0.86
TRAPPC11-210ENST00000513600 RNF111Q6ZNA4 994 aa9.7□□□□□ -0.86
TRAPPC11-210ENST00000513600 CCDC144CPQ8IYA2 1237 aa9.7□□□□□ -0.86
TRAPPC11-210ENST00000513600 C19orf47Q8N9M1 422 aaKnown RBP9.7□□□□□ -0.86
TRAPPC11-210ENST00000513600 FMNL2Q96PY5 1086 aa9.7□□□□□ -0.86
TRAPPC11-210ENST00000513600 CAPN10Q9HC96 672 aa9.7□□□□□ -0.86
TRAPPC11-210ENST00000513600 PRR13Q9NZ81 148 aa9.7□□□□□ -0.86
TRAPPC11-210ENST00000513600 FBXL21Q9UKT6 434 aa9.7□□□□□ -0.86
TRAPPC11-210ENST00000513600 PRAMEF1O95521 474 aa9.69□□□□□ -0.86
TRAPPC11-210ENST00000513600 ZYXQ15942 572 aaKnown RBP9.69□□□□□ -0.86
TRAPPC11-210ENST00000513600 FAM168AQ92567 244 aa9.69□□□□□ -0.86
TRAPPC11-210ENST00000513600 DHX38Q92620 1227 aaKnown RBP9.69□□□□□ -0.86
TRAPPC11-210ENST00000513600 TCTN2Q96GX1 697 aa9.69□□□□□ -0.86
TRAPPC11-210ENST00000513600 SHDQ96IW2 340 aa9.69□□□□□ -0.86
TRAPPC11-210ENST00000513600 ADAMTS10Q9H324 1103 aa9.69□□□□□ -0.86
TRAPPC11-210ENST00000513600 CHST7Q9NS84 486 aa9.69□□□□□ -0.86
TRAPPC11-210ENST00000513600 RAC2P15153 192 aa9.68□□□□□ -0.86
TRAPPC11-210ENST00000513600 ATF4P18848 351 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC11-210ENST00000513600 PCBP3P57721 371 aaKnown RBP9.68□□□□□ -0.86
TRAPPC11-210ENST00000513600 TEKQ02763 1124 aa9.68□□□□□ -0.86
TRAPPC11-210ENST00000513600 ZSWIM9Q86XI8 627 aa9.68□□□□□ -0.86
TRAPPC11-210ENST00000513600 C7orf61Q8IZ16 206 aa9.68□□□□□ -0.86
TRAPPC11-210ENST00000513600 USHBP1Q8N6Y0 703 aa9.68□□□□□ -0.86
TRAPPC11-210ENST00000513600 ZNF214Q9UL59 606 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC11-210ENST00000513600 CARMIL2Q6F5E8 1435 aa9.67□□□□□ -0.86
TRAPPC11-210ENST00000513600 SSU72P8A0A1W2PR75 194 aa9.67□□□□□ -0.86
TRAPPC11-210ENST00000513600 C9IYK1 514 aa9.67□□□□□ -0.86
TRAPPC11-210ENST00000513600 HK2P52789 917 aa9.67□□□□□ -0.86
TRAPPC11-210ENST00000513600 KCNMB1Q16558 191 aa9.67□□□□□ -0.86
TRAPPC11-210ENST00000513600 ANKRD39Q53RE8 183 aa9.67□□□□□ -0.86
TRAPPC11-210ENST00000513600 LINC00116Q8NCU8 138 aa9.67□□□□□ -0.86
TRAPPC11-210ENST00000513600 KIRREL1Q96J84 757 aa9.67□□□□□ -0.86
TRAPPC11-210ENST00000513600 ZGLP1P0C6A0 271 aa9.66□□□□□ -0.86
TRAPPC11-210ENST00000513600 TXKP42681 527 aa9.66□□□□□ -0.86
TRAPPC11-210ENST00000513600 TDRD10Q5VZ19 366 aaKnown RBP9.66□□□□□ -0.86
TRAPPC11-210ENST00000513600 PPFIBP1Q86W92 1011 aa9.66□□□□□ -0.86
TRAPPC11-210ENST00000513600 PHAXQ9H814 394 aaKnown RBP9.66□□□□□ -0.86
TRAPPC11-210ENST00000513600 GFOD1Q9NXC2 390 aa9.66□□□□□ -0.86
TRAPPC11-210ENST00000513600 LTBP3Q9NS15 1303 aa9.65□□□□□ -0.86
TRAPPC11-210ENST00000513600 A0A1W2PQH9 124 aa9.65□□□□□ -0.86
TRAPPC11-210ENST00000513600 HPXP02790 462 aa9.65□□□□□ -0.86
TRAPPC11-210ENST00000513600 DUSP4Q13115 394 aa9.65□□□□□ -0.86
TRAPPC11-210ENST00000513600 PDZD8Q8NEN9 1154 aa9.65□□□□□ -0.86
TRAPPC11-210ENST00000513600 KRTAP4-8Q9BYQ9 185 aa9.65□□□□□ -0.86
TRAPPC11-210ENST00000513600 FOXP3Q9BZS1 431 aa9.65□□□□□ -0.86
TRAPPC11-210ENST00000513600 TCFL5Q9UL49 500 aa9.65□□□□□ -0.86
TRAPPC11-210ENST00000513600 ZNF281Q9Y2X9 895 aa9.65□□□□□ -0.86
TRAPPC11-210ENST00000513600 SHOXO15266 292 aa9.64□□□□□ -0.87
TRAPPC11-210ENST00000513600 CASP7P55210 303 aa9.64□□□□□ -0.87
TRAPPC11-210ENST00000513600 TMEM67Q5HYA8 995 aa9.64□□□□□ -0.87
TRAPPC11-210ENST00000513600 AXDND1Q5T1B0 1012 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC11-210ENST00000513600 FYB2Q5VWT5 728 aa9.64□□□□□ -0.87
TRAPPC11-210ENST00000513600 OXR1Q8N573 874 aa9.64□□□□□ -0.87
TRAPPC11-210ENST00000513600 IGSF5Q9NSI5 407 aa9.64□□□□□ -0.87
TRAPPC11-210ENST00000513600 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC11-210ENST00000513600 TP53P04637 393 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC11-210ENST00000513600 SYPP08247 313 aa9.63□□□□□ -0.87
TRAPPC11-210ENST00000513600 PPP2R5EQ16537 467 aa9.63□□□□□ -0.87
TRAPPC11-210ENST00000513600 SPPL2CQ8IUH8 684 aa9.63□□□□□ -0.87
TRAPPC11-210ENST00000513600 ABHD4Q8TB40 342 aa9.63□□□□□ -0.87
TRAPPC11-210ENST00000513600 MYLIPQ8WY64 445 aa9.63□□□□□ -0.87
TRAPPC11-210ENST00000513600 DSCC1Q9BVC3 393 aa9.63□□□□□ -0.87
TRAPPC11-210ENST00000513600 FITM1A5D6W6 292 aa9.62□□□□□ -0.87
TRAPPC11-210ENST00000513600 GLI1P08151 1106 aa9.62□□□□□ -0.87
TRAPPC11-210ENST00000513600 ENDOUP21128 410 aaKnown RBP9.62□□□□□ -0.87
TRAPPC11-210ENST00000513600 RPL10P27635 214 aaKnown RBP9.62□□□□□ -0.87
TRAPPC11-210ENST00000513600 CHRNEQ04844 493 aa9.62□□□□□ -0.87
TRAPPC11-210ENST00000513600 GNPTABQ3T906 1256 aa9.62□□□□□ -0.87
TRAPPC11-210ENST00000513600 NOL9Q5SY16 702 aaKnown RBP9.62□□□□□ -0.87
TRAPPC11-210ENST00000513600 DCAF15Q66K64 600 aa9.62□□□□□ -0.87
TRAPPC11-210ENST00000513600 ANAPC16Q96DE5 110 aa9.62□□□□□ -0.87
TRAPPC11-210ENST00000513600 GP6Q9HCN6 339 aa9.62□□□□□ -0.87
TRAPPC11-210ENST00000513600 FAM53CQ9NYF3 392 aa9.62□□□□□ -0.87
TRAPPC11-210ENST00000513600 MINPP1Q9UNW1 487 aa9.62□□□□□ -0.87
TRAPPC11-210ENST00000513600 MEIS1O00470 390 aa9.61□□□□□ -0.87
TRAPPC11-210ENST00000513600 SSBP05455 408 aaKnown RBP eCLIP9.61□□□□□ -0.87
TRAPPC11-210ENST00000513600 GSNP06396 782 aa9.61□□□□□ -0.87
TRAPPC11-210ENST00000513600 CD247P20963 164 aa9.61□□□□□ -0.87
TRAPPC11-210ENST00000513600 BMP8BP34820 402 aa9.61□□□□□ -0.87
TRAPPC11-210ENST00000513600 ERVFC1P60507 584 aa9.61□□□□□ -0.87
TRAPPC11-210ENST00000513600 SLC7A5Q01650 507 aa9.61□□□□□ -0.87
TRAPPC11-210ENST00000513600 TCEAL1Q15170 157 aa9.61□□□□□ -0.87
TRAPPC11-210ENST00000513600 NR0B2Q15466 257 aa9.61□□□□□ -0.87
TRAPPC11-210ENST00000513600 WAPLQ7Z5K2 1190 aa9.61□□□□□ -0.87
TRAPPC11-210ENST00000513600 LILRA2Q8N149 483 aa9.61□□□□□ -0.87
TRAPPC11-210ENST00000513600 ANKS4BQ8N8V4 417 aa9.61□□□□□ -0.87
TRAPPC11-210ENST00000513600 LINC01599Q8WXQ3 324 aa9.61□□□□□ -0.87
TRAPPC11-210ENST00000513600 TINF2Q9BSI4 451 aa9.61□□□□□ -0.87
TRAPPC11-210ENST00000513600 ZMYM5Q9UJ78 669 aa9.61□□□□□ -0.87
TRAPPC11-210ENST00000513600 CTSKP43235 329 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms