RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 KRT37O76014 449 aa11.9□□□□□ -0.5
PTPN20-228ENST00000513266 CD4P01730 458 aa11.9□□□□□ -0.5
PTPN20-228ENST00000513266 ZNF865P0CJ78 1059 aaPredicted RBP11.9□□□□□ -0.5
PTPN20-228ENST00000513266 VCAM1P19320 739 aa11.9□□□□□ -0.5
PTPN20-228ENST00000513266 ERCC3P19447 782 aa11.9□□□□□ -0.5
PTPN20-228ENST00000513266 PTPN5P54829 565 aa11.9□□□□□ -0.5
PTPN20-228ENST00000513266 IRX5P78411 483 aaPredicted RBP11.9□□□□□ -0.5
PTPN20-228ENST00000513266 MECOMQ03112 1051 aa11.9□□□□□ -0.5
PTPN20-228ENST00000513266 TAP1Q03518 808 aa11.9□□□□□ -0.5
PTPN20-228ENST00000513266 ERMP1Q7Z2K6 904 aa11.9□□□□□ -0.5
PTPN20-228ENST00000513266 SPRED2Q7Z698 418 aa11.9□□□□□ -0.5
PTPN20-228ENST00000513266 MFSD14AQ96MC6 490 aa11.9□□□□□ -0.5
PTPN20-228ENST00000513266 GINM1Q9NU53 330 aa11.9□□□□□ -0.5
PTPN20-228ENST00000513266 SLC5A4Q9NY91 659 aa11.9□□□□□ -0.5
PTPN20-228ENST00000513266 ABCF2Q9UG63 623 aa11.9□□□□□ -0.5
PTPN20-228ENST00000513266 TET1Q8NFU7 2136 aa11.89□□□□□ -0.51
PTPN20-228ENST00000513266 TPRP12270 2363 aaKnown RBP11.89□□□□□ -0.51
PTPN20-228ENST00000513266 SIP14410 1827 aa11.89□□□□□ -0.51
PTPN20-228ENST00000513266 ARVCFO00192 962 aa11.89□□□□□ -0.51
PTPN20-228ENST00000513266 AKR1A1P14550 325 aa11.89□□□□□ -0.51
PTPN20-228ENST00000513266 TCF15Q12870 199 aa11.89□□□□□ -0.51
PTPN20-228ENST00000513266 METTL16Q86W50 562 aaKnown RBP11.89□□□□□ -0.51
PTPN20-228ENST00000513266 SHCBP1Q8NEM2 672 aa11.89□□□□□ -0.51
PTPN20-228ENST00000513266 GLT1D1Q96MS3 346 aa11.89□□□□□ -0.51
PTPN20-228ENST00000513266 SPATC1LQ9H0A9 340 aa11.89□□□□□ -0.51
PTPN20-228ENST00000513266 GRXCR2A6NFK2 248 aa11.88□□□□□ -0.51
PTPN20-228ENST00000513266 ZBBXA8MT70 800 aa11.88□□□□□ -0.51
PTPN20-228ENST00000513266 EYA2O00167 538 aa11.88□□□□□ -0.51
PTPN20-228ENST00000513266 ZBTB22O15209 634 aa11.88□□□□□ -0.51
PTPN20-228ENST00000513266 MAP4K4O95819 1239 aaPredicted RBP11.88□□□□□ -0.51
PTPN20-228ENST00000513266 KCNA5P22460 613 aa11.88□□□□□ -0.51
PTPN20-228ENST00000513266 RASGRF1Q13972 1273 aa11.88□□□□□ -0.51
PTPN20-228ENST00000513266 PTCRAQ6ISU1 281 aaPredicted RBP11.88□□□□□ -0.51
PTPN20-228ENST00000513266 ATG9AQ7Z3C6 839 aa11.88□□□□□ -0.51
PTPN20-228ENST00000513266 ABRAQ8N0Z2 381 aa11.88□□□□□ -0.51
PTPN20-228ENST00000513266 FEZ1Q99689 392 aa11.88□□□□□ -0.51
PTPN20-228ENST00000513266 WNT8AQ9H1J5 351 aa11.88□□□□□ -0.51
PTPN20-228ENST00000513266 HIPK3Q9H422 1215 aa11.88□□□□□ -0.51
PTPN20-228ENST00000513266 FAM86C1Q9NVL1 165 aa11.88□□□□□ -0.51
PTPN20-228ENST00000513266 MYO5AQ9Y4I1 1855 aaKnown RBP11.87□□□□□ -0.51
PTPN20-228ENST00000513266 MYO15AQ9UKN7 3530 aa11.87□□□□□ -0.51
PTPN20-228ENST00000513266 A0A0U1RQG5 324 aaPredicted RBP11.87□□□□□ -0.51
PTPN20-228ENST00000513266 TLR3O15455 904 aaKnown RBP11.87□□□□□ -0.51
PTPN20-228ENST00000513266 GH2P01242 217 aa11.87□□□□□ -0.51
PTPN20-228ENST00000513266 CCL23P55773 120 aa11.87□□□□□ -0.51
PTPN20-228ENST00000513266 TTLL4Q14679 1199 aa11.87□□□□□ -0.51
PTPN20-228ENST00000513266 ATP2B3Q16720 1220 aa11.87□□□□□ -0.51
PTPN20-228ENST00000513266 SPTY2D1Q68D10 685 aaPredicted RBP11.87□□□□□ -0.51
PTPN20-228ENST00000513266 CDCA7LQ96GN5 454 aa11.87□□□□□ -0.51
PTPN20-228ENST00000513266 TINF2Q9BSI4 451 aa11.87□□□□□ -0.51
PTPN20-228ENST00000513266 SRCIN1Q9C0H9 1055 aa11.87□□□□□ -0.51
PTPN20-228ENST00000513266 KIAA1683Q9H0B3 1180 aa11.87□□□□□ -0.51
PTPN20-228ENST00000513266 DHX36Q9H2U1 1008 aaKnown RBP11.87□□□□□ -0.51
PTPN20-228ENST00000513266 RPAP3Q9H6T3 665 aaPredicted RBP11.87□□□□□ -0.51
PTPN20-228ENST00000513266 PDS5AQ29RF7 1337 aaKnown RBP11.86□□□□□ -0.51
PTPN20-228ENST00000513266 ASGR1P07306 291 aa11.86□□□□□ -0.51
PTPN20-228ENST00000513266 CST5P28325 142 aaPredicted RBP11.86□□□□□ -0.51
PTPN20-228ENST00000513266 ADORA1P30542 326 aa11.86□□□□□ -0.51
PTPN20-228ENST00000513266 RFX5P48382 616 aaPredicted RBP11.86□□□□□ -0.51
PTPN20-228ENST00000513266 RALBP1Q15311 655 aa11.86□□□□□ -0.51
PTPN20-228ENST00000513266 CCDC102BQ68D86 513 aa11.86□□□□□ -0.51
PTPN20-228ENST00000513266 FOXP4Q8IVH2 680 aaPredicted RBP11.86□□□□□ -0.51
PTPN20-228ENST00000513266 TEX11Q8IYF3 940 aa11.86□□□□□ -0.51
PTPN20-228ENST00000513266 ACER1Q8TDN7 264 aa11.86□□□□□ -0.51
PTPN20-228ENST00000513266 SH3RF3Q8TEJ3 882 aaPredicted RBP11.86□□□□□ -0.51
PTPN20-228ENST00000513266 VTI1AQ96AJ9 217 aa11.86□□□□□ -0.51
PTPN20-228ENST00000513266 NOC4LQ9BVI4 516 aaKnown RBP11.86□□□□□ -0.51
PTPN20-228ENST00000513266 MROH8Q9H579 483 aa11.86□□□□□ -0.51
PTPN20-228ENST00000513266 ALG13Q9NP73 1137 aaKnown RBP11.86□□□□□ -0.51
PTPN20-228ENST00000513266 GVINP1Q7Z2Y8 2422 aa11.86□□□□□ -0.51
PTPN20-228ENST00000513266 ZNF536O15090 1300 aa11.86□□□□□ -0.51
PTPN20-228ENST00000513266 PGK2P07205 417 aa11.85□□□□□ -0.51
PTPN20-228ENST00000513266 USP14P54578 494 aa11.85□□□□□ -0.51
PTPN20-228ENST00000513266 ZP2Q05996 745 aa11.85□□□□□ -0.51
PTPN20-228ENST00000513266 SLC4A10Q6U841 1118 aa11.85□□□□□ -0.51
PTPN20-228ENST00000513266 ERICH6Q7L0X2 663 aa11.85□□□□□ -0.51
PTPN20-228ENST00000513266 NCAPG2Q86XI2 1143 aa11.85□□□□□ -0.51
PTPN20-228ENST00000513266 CRACR2BQ8N4Y2 399 aaPredicted RBP11.85□□□□□ -0.51
PTPN20-228ENST00000513266 GDPD5Q8WTR4 605 aa11.85□□□□□ -0.51
PTPN20-228ENST00000513266 LMCD1Q9NZU5 365 aa11.85□□□□□ -0.51
PTPN20-228ENST00000513266 COL4A6Q14031 1691 aa11.84□□□□□ -0.51
PTPN20-228ENST00000513266 C19orf67A6NJJ6 358 aa11.84□□□□□ -0.51
PTPN20-228ENST00000513266 ADCY6O43306 1168 aa11.84□□□□□ -0.51
PTPN20-228ENST00000513266 VAMP4O75379 141 aa11.84□□□□□ -0.51
PTPN20-228ENST00000513266 FCER1AP12319 257 aa11.84□□□□□ -0.51
PTPN20-228ENST00000513266 COG2Q14746 738 aa11.84□□□□□ -0.51
PTPN20-228ENST00000513266 ZNF792Q3KQV3 632 aa11.84□□□□□ -0.51
PTPN20-228ENST00000513266 RPUSD2Q8IZ73 545 aaKnown RBP11.84□□□□□ -0.51
PTPN20-228ENST00000513266 NSUN4Q96CB9 384 aaKnown RBP11.84□□□□□ -0.51
PTPN20-228ENST00000513266 SCLYQ96I15 445 aa11.84□□□□□ -0.51
PTPN20-228ENST00000513266 RNF216Q9NWF9 866 aaPredicted RBP11.84□□□□□ -0.51
PTPN20-228ENST00000513266 PALD1Q9ULE6 856 aa11.84□□□□□ -0.51
PTPN20-228ENST00000513266 MYO7AQ13402 2215 aa11.84□□□□□ -0.51
PTPN20-228ENST00000513266 TANC1Q9C0D5 1861 aa11.84□□□□□ -0.51
PTPN20-228ENST00000513266 VPS13AQ96RL7 3174 aa11.83□□□□□ -0.52
PTPN20-228ENST00000513266 DUSP11O75319 330 aaKnown RBP11.83□□□□□ -0.52
PTPN20-228ENST00000513266 LDHCP07864 332 aa11.83□□□□□ -0.52
PTPN20-228ENST00000513266 C6orf222P0C671 652 aaPredicted RBP11.83□□□□□ -0.52
PTPN20-228ENST00000513266 PLS1Q14651 629 aa11.83□□□□□ -0.52
PTPN20-228ENST00000513266 SLC43A3Q8NBI5 491 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms