RNA–Protein interactions for RNA: ENST00000513009.5

SDHC-208, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-208ENST00000513009 TEX11Q8IYF3 940 aa10.09□□□□□ -0.79
SDHC-208ENST00000513009 SSH3Q8TE77 659 aa10.09□□□□□ -0.79
SDHC-208ENST00000513009 APBA2Q99767 749 aa10.09□□□□□ -0.79
SDHC-208ENST00000513009 NOL10Q9BSC4 688 aaKnown RBP10.09□□□□□ -0.79
SDHC-208ENST00000513009 C1orf115Q9H7X2 142 aa10.09□□□□□ -0.79
SDHC-208ENST00000513009 RBPJLQ9UBG7 517 aa10.09□□□□□ -0.79
SDHC-208ENST00000513009 LTBP2Q14767 1821 aa10.09□□□□□ -0.79
SDHC-208ENST00000513009 PNMA6EA0A0J9YXQ4 647 aa10.08□□□□□ -0.8
SDHC-208ENST00000513009 USP17L10C9JJH3 530 aa10.08□□□□□ -0.8
SDHC-208ENST00000513009 RLBP1P12271 317 aa10.08□□□□□ -0.8
SDHC-208ENST00000513009 CCND3P30281 292 aaPredicted RBP10.08□□□□□ -0.8
SDHC-208ENST00000513009 ERVK-9P63128 1117 aa10.08□□□□□ -0.8
SDHC-208ENST00000513009 ERVK-24P63145 666 aa10.08□□□□□ -0.8
SDHC-208ENST00000513009 Q3C1V9 767 aa10.08□□□□□ -0.8
SDHC-208ENST00000513009 PI16Q6UXB8 463 aa10.08□□□□□ -0.8
SDHC-208ENST00000513009 TBC1D9Q6ZT07 1266 aa10.08□□□□□ -0.8
SDHC-208ENST00000513009 GPR142Q7Z601 462 aa10.08□□□□□ -0.8
SDHC-208ENST00000513009 FOXP4Q8IVH2 680 aaPredicted RBP10.08□□□□□ -0.8
SDHC-208ENST00000513009 PORCNQ9H237 461 aa10.08□□□□□ -0.8
SDHC-208ENST00000513009 DNAJC18Q9H819 358 aa10.08□□□□□ -0.8
SDHC-208ENST00000513009 GPR108Q9NPR9 543 aa10.08□□□□□ -0.8
SDHC-208ENST00000513009 RAI14Q9P0K7 980 aa10.08□□□□□ -0.8
SDHC-208ENST00000513009 PEX10O60683 326 aa10.07□□□□□ -0.8
SDHC-208ENST00000513009 IGSF3O75054 1194 aa10.07□□□□□ -0.8
SDHC-208ENST00000513009 RAB11FIP3O75154 756 aa10.07□□□□□ -0.8
SDHC-208ENST00000513009 BAG3O95817 575 aa10.07□□□□□ -0.8
SDHC-208ENST00000513009 JAG1P78504 1218 aa10.07□□□□□ -0.8
SDHC-208ENST00000513009 MDM2Q00987 491 aaPredicted RBP10.07□□□□□ -0.8
SDHC-208ENST00000513009 CCL14Q16627 93 aa10.07□□□□□ -0.8
SDHC-208ENST00000513009 PLEKHH3Q7Z736 793 aa10.07□□□□□ -0.8
SDHC-208ENST00000513009 CCAR1Q8IX12 1150 aaKnown RBP10.07□□□□□ -0.8
SDHC-208ENST00000513009 SCUBE3Q8IX30 993 aa10.07□□□□□ -0.8
SDHC-208ENST00000513009 CLASRPQ8N2M8 674 aaKnown RBP10.07□□□□□ -0.8
SDHC-208ENST00000513009 SH3RF3Q8TEJ3 882 aaPredicted RBP10.07□□□□□ -0.8
SDHC-208ENST00000513009 GUCD1Q96NT3 240 aa10.07□□□□□ -0.8
SDHC-208ENST00000513009 TMUB1Q9BVT8 246 aa10.07□□□□□ -0.8
SDHC-208ENST00000513009 ZBTB21Q9ULJ3 1066 aa10.07□□□□□ -0.8
SDHC-208ENST00000513009 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.07□□□□□ -0.8
SDHC-208ENST00000513009 MYO5AQ9Y4I1 1855 aaKnown RBP10.06□□□□□ -0.8
SDHC-208ENST00000513009 RLFQ13129 1914 aa10.06□□□□□ -0.8
SDHC-208ENST00000513009 DDX11L8A8MPP1 907 aa10.06□□□□□ -0.8
SDHC-208ENST00000513009 TLL1O43897 1013 aa10.06□□□□□ -0.8
SDHC-208ENST00000513009 MSCO60682 206 aa10.06□□□□□ -0.8
SDHC-208ENST00000513009 IFIT2P09913 472 aaKnown RBP10.06□□□□□ -0.8
SDHC-208ENST00000513009 MCAMP43121 646 aa10.06□□□□□ -0.8
SDHC-208ENST00000513009 CEP85Q6P2H3 762 aa10.06□□□□□ -0.8
SDHC-208ENST00000513009 C12orf42Q96LP6 360 aa10.06□□□□□ -0.8
SDHC-208ENST00000513009 LBHD1Q9BQE6 289 aaPredicted RBP10.06□□□□□ -0.8
SDHC-208ENST00000513009 PRKD2Q9BZL6 878 aa10.06□□□□□ -0.8
SDHC-208ENST00000513009 BCL11AQ9H165 835 aa10.06□□□□□ -0.8
SDHC-208ENST00000513009 LRP2BPQ9P2M1 347 aa10.06□□□□□ -0.8
SDHC-208ENST00000513009 RABGAP1Q9Y3P9 1069 aa10.06□□□□□ -0.8
SDHC-208ENST00000513009 FLT1P17948 1338 aa10.06□□□□□ -0.8
SDHC-208ENST00000513009 MYH1P12882 1939 aa10.05□□□□□ -0.8
SDHC-208ENST00000513009 SLC15A5A6NIM6 579 aa10.05□□□□□ -0.8
SDHC-208ENST00000513009 GLRX3O76003 335 aaKnown RBP10.05□□□□□ -0.8
SDHC-208ENST00000513009 HOXC6P09630 235 aa10.05□□□□□ -0.8
SDHC-208ENST00000513009 GCGRP47871 477 aa10.05□□□□□ -0.8
SDHC-208ENST00000513009 CCNA1P78396 465 aa10.05□□□□□ -0.8
SDHC-208ENST00000513009 PUS10Q3MIT2 529 aaKnown RBP10.05□□□□□ -0.8
SDHC-208ENST00000513009 TNNI3KQ59H18 835 aa10.05□□□□□ -0.8
SDHC-208ENST00000513009 MFSD14CQ5VZR4 134 aa10.05□□□□□ -0.8
SDHC-208ENST00000513009 NAA16Q6N069 864 aaPredicted RBP10.05□□□□□ -0.8
SDHC-208ENST00000513009 USP17L2Q6R6M4 530 aa10.05□□□□□ -0.8
SDHC-208ENST00000513009 CRACR2BQ8N4Y2 399 aaPredicted RBP10.05□□□□□ -0.8
SDHC-208ENST00000513009 LPAR1Q92633 364 aa10.05□□□□□ -0.8
SDHC-208ENST00000513009 KIF1BPQ96EK5 621 aa10.05□□□□□ -0.8
SDHC-208ENST00000513009 EDC3Q96F86 508 aaKnown RBP10.05□□□□□ -0.8
SDHC-208ENST00000513009 PAGR1Q9BTK6 254 aa10.05□□□□□ -0.8
SDHC-208ENST00000513009 TRIM34Q9BYJ4 488 aa10.05□□□□□ -0.8
SDHC-208ENST00000513009 ZBTB40Q9NUA8 1239 aa10.05□□□□□ -0.8
SDHC-208ENST00000513009 AATFQ9NY61 560 aaKnown RBP eCLIP10.05□□□□□ -0.8
SDHC-208ENST00000513009 NOP58Q9Y2X3 529 aaKnown RBP10.05□□□□□ -0.8
SDHC-208ENST00000513009 FPGT-TNNI3KV9GXZ4 949 aa10.05□□□□□ -0.8
SDHC-208ENST00000513009 ZNF236Q9UL36 1845 aa10.05□□□□□ -0.8
SDHC-208ENST00000513009 APBB1O00213 710 aa10.04□□□□□ -0.8
SDHC-208ENST00000513009 DNM1LO00429 736 aa10.04□□□□□ -0.8
SDHC-208ENST00000513009 CNMDO75829 334 aa10.04□□□□□ -0.8
SDHC-208ENST00000513009 GDF11O95390 407 aa10.04□□□□□ -0.8
SDHC-208ENST00000513009 IGHA2P01877 340 aa10.04□□□□□ -0.8
SDHC-208ENST00000513009 AAMPQ13685 434 aa10.04□□□□□ -0.8
SDHC-208ENST00000513009 SHROOM1Q2M3G4 852 aaPredicted RBP10.04□□□□□ -0.8
SDHC-208ENST00000513009 ZNF697Q5TEC3 545 aa10.04□□□□□ -0.8
SDHC-208ENST00000513009 LBX2Q6XYB7 198 aa10.04□□□□□ -0.8
SDHC-208ENST00000513009 MAPKAPK5Q8IW41 473 aa10.04□□□□□ -0.8
SDHC-208ENST00000513009 RDH13Q8NBN7 331 aa10.04□□□□□ -0.8
SDHC-208ENST00000513009 TGFBRAP1Q8WUH2 860 aa10.04□□□□□ -0.8
SDHC-208ENST00000513009 SENP6Q9GZR1 1112 aaPredicted RBP10.04□□□□□ -0.8
SDHC-208ENST00000513009 FLRT1Q9NZU1 646 aa10.04□□□□□ -0.8
SDHC-208ENST00000513009 DDX20Q9UHI6 824 aaKnown RBP10.04□□□□□ -0.8
SDHC-208ENST00000513009 PALD1Q9ULE6 856 aa10.04□□□□□ -0.8
SDHC-208ENST00000513009 USP17L15C9J2P7 530 aa10.03□□□□□ -0.8
SDHC-208ENST00000513009 USP17L13C9JLJ4 530 aa10.03□□□□□ -0.8
SDHC-208ENST00000513009 USP17L11C9JVI0 530 aa10.03□□□□□ -0.8
SDHC-208ENST00000513009 USP17L18D6R9N7 530 aa10.03□□□□□ -0.8
SDHC-208ENST00000513009 USP17L22D6RA61 530 aa10.03□□□□□ -0.8
SDHC-208ENST00000513009 USP17L17D6RBQ6 530 aa10.03□□□□□ -0.8
SDHC-208ENST00000513009 USP17L19D6RCP7 530 aa10.03□□□□□ -0.8
SDHC-208ENST00000513009 USP17L20D6RJB6 530 aa10.03□□□□□ -0.8
SDHC-208ENST00000513009 RNF223E7ERA6 249 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms