RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 DUSP15Q9H1R2 295 aaPredicted RBP8.43□□□□□ -1.06
CHD1-209ENST00000512844 CARS2Q9HA77 564 aaKnown RBP8.43□□□□□ -1.06
CHD1-209ENST00000512844 PRKAG3Q9UGI9 489 aa8.43□□□□□ -1.06
CHD1-209ENST00000512844 ZNF214Q9UL59 606 aaPredicted RBP8.43□□□□□ -1.06
CHD1-209ENST00000512844 NAT2P11245 290 aa8.42□□□□□ -1.06
CHD1-209ENST00000512844 FUT4P22083 530 aa8.42□□□□□ -1.06
CHD1-209ENST00000512844 SF3A1Q15459 793 aaKnown RBP8.42□□□□□ -1.06
CHD1-209ENST00000512844 LARP1BQ659C4 914 aaKnown RBP8.42□□□□□ -1.06
CHD1-209ENST00000512844 C7orf61Q8IZ16 206 aa8.42□□□□□ -1.06
CHD1-209ENST00000512844 GBP3Q9H0R5 595 aa8.42□□□□□ -1.06
CHD1-209ENST00000512844 COL17A1Q9UMD9 1497 aaPredicted RBP8.41□□□□□ -1.06
CHD1-209ENST00000512844 ADAMTS4O75173 837 aa8.41□□□□□ -1.06
CHD1-209ENST00000512844 HEATR6Q6AI08 1181 aaKnown RBP8.41□□□□□ -1.06
CHD1-209ENST00000512844 SLC23A3Q6PIS1 610 aa8.41□□□□□ -1.06
CHD1-209ENST00000512844 VHLLQ6RSH7 139 aa8.41□□□□□ -1.06
CHD1-209ENST00000512844 FAM169BQ8N8A8 192 aa8.41□□□□□ -1.06
CHD1-209ENST00000512844 SYTL5Q8TDW5 730 aaPredicted RBP8.41□□□□□ -1.06
CHD1-209ENST00000512844 PRDM14Q9GZV8 571 aa8.41□□□□□ -1.06
CHD1-209ENST00000512844 ZNF408Q9H9D4 720 aa8.41□□□□□ -1.06
CHD1-209ENST00000512844 CHST7Q9NS84 486 aa8.41□□□□□ -1.06
CHD1-209ENST00000512844 C9IYK1 514 aa8.4□□□□□ -1.06
CHD1-209ENST00000512844 SIGLEC6O43699 453 aa8.4□□□□□ -1.06
CHD1-209ENST00000512844 SRFP11831 508 aa8.4□□□□□ -1.06
CHD1-209ENST00000512844 ITGA4P13612 1032 aa8.4□□□□□ -1.06
CHD1-209ENST00000512844 IRAK1P51617 712 aa8.4□□□□□ -1.06
CHD1-209ENST00000512844 PCBP3P57721 371 aaKnown RBP8.4□□□□□ -1.06
CHD1-209ENST00000512844 EGR3Q06889 387 aa8.4□□□□□ -1.06
CHD1-209ENST00000512844 NCAPHQ15003 741 aa8.4□□□□□ -1.06
CHD1-209ENST00000512844 CWF19L1Q69YN2 538 aaKnown RBP8.4□□□□□ -1.06
CHD1-209ENST00000512844 TMC3Q7Z5M5 1100 aa8.4□□□□□ -1.06
CHD1-209ENST00000512844 ABI1Q8IZP0 508 aa8.4□□□□□ -1.06
CHD1-209ENST00000512844 ZNF655Q8N720 491 aaPredicted RBP8.4□□□□□ -1.06
CHD1-209ENST00000512844 DAGLBQ8NCG7 672 aa8.4□□□□□ -1.06
CHD1-209ENST00000512844 GFOD1Q9NXC2 390 aa8.4□□□□□ -1.06
CHD1-209ENST00000512844 PRR13Q9NZ81 148 aa8.4□□□□□ -1.06
CHD1-209ENST00000512844 OAS3Q9Y6K5 1087 aaKnown RBP8.4□□□□□ -1.06
CHD1-209ENST00000512844 LTBP3Q9NS15 1303 aa8.39□□□□□ -1.07
CHD1-209ENST00000512844 MEIS1O00470 390 aa8.39□□□□□ -1.07
CHD1-209ENST00000512844 PRAMEF1O95521 474 aa8.39□□□□□ -1.07
CHD1-209ENST00000512844 ETFBP38117 255 aa8.39□□□□□ -1.07
CHD1-209ENST00000512844 FXNQ16595 210 aa8.39□□□□□ -1.07
CHD1-209ENST00000512844 DCAF15Q66K64 600 aa8.39□□□□□ -1.07
CHD1-209ENST00000512844 ADAT2Q7Z6V5 191 aaKnown RBP8.39□□□□□ -1.07
CHD1-209ENST00000512844 PPFIBP1Q86W92 1011 aa8.39□□□□□ -1.07
CHD1-209ENST00000512844 CKAP2LQ8IYA6 745 aa8.39□□□□□ -1.07
CHD1-209ENST00000512844 RC3H2Q9HBD1 1191 aaKnown RBP8.39□□□□□ -1.07
CHD1-209ENST00000512844 PCDHB10Q9UN67 800 aa8.39□□□□□ -1.07
CHD1-209ENST00000512844 SHISA3A0PJX4 238 aa8.38□□□□□ -1.07
CHD1-209ENST00000512844 U2SURPO15042 1029 aaKnown RBP8.38□□□□□ -1.07
CHD1-209ENST00000512844 SNW1Q13573 536 aaKnown RBP8.38□□□□□ -1.07
CHD1-209ENST00000512844 ZNF792Q3KQV3 632 aa8.38□□□□□ -1.07
CHD1-209ENST00000512844 AXDND1Q5T1B0 1012 aaPredicted RBP8.38□□□□□ -1.07
CHD1-209ENST00000512844 KIAA1211LQ6NV74 962 aa8.38□□□□□ -1.07
CHD1-209ENST00000512844 HAUS7Q99871 368 aa8.38□□□□□ -1.07
CHD1-209ENST00000512844 HDAC8Q9BY41 377 aa8.38□□□□□ -1.07
CHD1-209ENST00000512844 TRIM55Q9BYV6 548 aa8.38□□□□□ -1.07
CHD1-209ENST00000512844 SLAMF8Q9P0V8 285 aa8.38□□□□□ -1.07
CHD1-209ENST00000512844 SUGT1Q9Y2Z0 365 aa8.38□□□□□ -1.07
CHD1-209ENST00000512844 BIN1O00499 593 aa8.37□□□□□ -1.07
CHD1-209ENST00000512844 PPM1BO75688 479 aa8.37□□□□□ -1.07
CHD1-209ENST00000512844 DDAH1O94760 285 aa8.37□□□□□ -1.07
CHD1-209ENST00000512844 ENDOUP21128 410 aaKnown RBP8.37□□□□□ -1.07
CHD1-209ENST00000512844 GTF2F1P35269 517 aaKnown RBP eCLIP8.37□□□□□ -1.07
CHD1-209ENST00000512844 GAB4Q2WGN9 574 aa8.37□□□□□ -1.07
CHD1-209ENST00000512844 ANKRD39Q53RE8 183 aa8.37□□□□□ -1.07
CHD1-209ENST00000512844 RNF111Q6ZNA4 994 aa8.37□□□□□ -1.07
CHD1-209ENST00000512844 ANKS3Q6ZW76 656 aa8.37□□□□□ -1.07
CHD1-209ENST00000512844 DHX38Q92620 1227 aaKnown RBP8.37□□□□□ -1.07
CHD1-209ENST00000512844 ALPK1Q96QP1 1244 aa8.37□□□□□ -1.07
CHD1-209ENST00000512844 GP6Q9HCN6 339 aa8.37□□□□□ -1.07
CHD1-209ENST00000512844 SF3B6Q9Y3B4 125 aaKnown RBP8.37□□□□□ -1.07
CHD1-209ENST00000512844 PCDHA11Q9Y5I1 949 aa8.37□□□□□ -1.07
CHD1-209ENST00000512844 WASH4PA8MWX3 477 aa8.36□□□□□ -1.07
CHD1-209ENST00000512844 CD247P20963 164 aa8.36□□□□□ -1.07
CHD1-209ENST00000512844 NFXL1Q6ZNB6 911 aa8.36□□□□□ -1.07
CHD1-209ENST00000512844 TCTN2Q96GX1 697 aa8.36□□□□□ -1.07
CHD1-209ENST00000512844 PRDM7Q9NQW5 492 aa8.36□□□□□ -1.07
CHD1-209ENST00000512844 WHRNQ9P202 907 aa8.36□□□□□ -1.07
CHD1-209ENST00000512844 ESR1P03372 595 aa8.35□□□□□ -1.07
CHD1-209ENST00000512844 GSNP06396 782 aa8.35□□□□□ -1.07
CHD1-209ENST00000512844 SYPP08247 313 aa8.35□□□□□ -1.07
CHD1-209ENST00000512844 RAC2P15153 192 aa8.35□□□□□ -1.07
CHD1-209ENST00000512844 RANGAP1P46060 587 aaPredicted RBP8.35□□□□□ -1.07
CHD1-209ENST00000512844 DUSP4Q13115 394 aa8.35□□□□□ -1.07
CHD1-209ENST00000512844 PPP1R14AQ96A00 147 aa8.35□□□□□ -1.07
CHD1-209ENST00000512844 HIRIP3Q9BW71 556 aaPredicted RBP8.35□□□□□ -1.07
CHD1-209ENST00000512844 TCFL5Q9UL49 500 aa8.35□□□□□ -1.07
CHD1-209ENST00000512844 FHOD1Q9Y613 1164 aa8.35□□□□□ -1.07
CHD1-209ENST00000512844 ANKRD34BA5PLL1 514 aa8.34□□□□□ -1.07
CHD1-209ENST00000512844 RNASE1P07998 156 aaKnown RBP8.34□□□□□ -1.07
CHD1-209ENST00000512844 RPL10P27635 214 aaKnown RBP8.34□□□□□ -1.07
CHD1-209ENST00000512844 C6orf15Q6UXA7 325 aaPredicted RBP8.34□□□□□ -1.07
CHD1-209ENST00000512844 WFDC3Q8IUB2 231 aa8.34□□□□□ -1.07
CHD1-209ENST00000512844 FAM178BQ8IXR5 827 aa8.34□□□□□ -1.07
CHD1-209ENST00000512844 CRACR2BQ8N4Y2 399 aaPredicted RBP8.34□□□□□ -1.07
CHD1-209ENST00000512844 HNRNPLLQ8WVV9 542 aaKnown RBP8.34□□□□□ -1.07
CHD1-209ENST00000512844 BRF1Q92994 677 aa8.34□□□□□ -1.07
CHD1-209ENST00000512844 APBA2Q99767 749 aa8.34□□□□□ -1.07
CHD1-209ENST00000512844 FOXP3Q9BZS1 431 aa8.34□□□□□ -1.07
CHD1-209ENST00000512844 NOL6Q9H6R4 1146 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms