RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 TMEM199Q8N511 208 aa15.26■□□□□ 0.03
DDX41-215ENST00000512431 ATG4CQ96DT6 458 aa15.26■□□□□ 0.03
DDX41-215ENST00000512431 PBX4Q9BYU1 374 aa15.26■□□□□ 0.03
DDX41-215ENST00000512431 ARHGEF10LQ9HCE6 1279 aa15.26■□□□□ 0.03
DDX41-215ENST00000512431 MSRAQ9UJ68 235 aa15.26■□□□□ 0.03
DDX41-215ENST00000512431 DIS3Q9Y2L1 958 aaKnown RBP15.26■□□□□ 0.03
DDX41-215ENST00000512431 SURF6O75683 361 aaKnown RBP15.25■□□□□ 0.03
DDX41-215ENST00000512431 TMEM179Q6ZVK1 233 aa15.25■□□□□ 0.03
DDX41-215ENST00000512431 MCM9Q9NXL9 1143 aa15.25■□□□□ 0.03
DDX41-215ENST00000512431 MYH1P12882 1939 aa15.25■□□□□ 0.03
DDX41-215ENST00000512431 PGK2P07205 417 aa15.24■□□□□ 0.03
DDX41-215ENST00000512431 PBX2P40425 430 aa15.24■□□□□ 0.03
DDX41-215ENST00000512431 RAB30Q15771 203 aa15.24■□□□□ 0.03
DDX41-215ENST00000512431 TRMT2AQ8IZ69 625 aaKnown RBP15.24■□□□□ 0.03
DDX41-215ENST00000512431 SPICE1Q8N0Z3 855 aa15.24■□□□□ 0.03
DDX41-215ENST00000512431 VTI1AQ96AJ9 217 aa15.24■□□□□ 0.03
DDX41-215ENST00000512431 GLT1D1Q96MS3 346 aa15.24■□□□□ 0.03
DDX41-215ENST00000512431 C1QTNF1Q9BXJ1 281 aa15.24■□□□□ 0.03
DDX41-215ENST00000512431 MTIF3Q9H2K0 278 aaKnown RBP15.24■□□□□ 0.03
DDX41-215ENST00000512431 FAM184BQ9ULE4 1060 aa15.24■□□□□ 0.03
DDX41-215ENST00000512431 MUC3AQ02505 3323 aa15.23■□□□□ 0.03
DDX41-215ENST00000512431 MAGEB6P1A0A0J9YX57 407 aa15.23■□□□□ 0.03
DDX41-215ENST00000512431 APBB1O00213 710 aa15.23■□□□□ 0.03
DDX41-215ENST00000512431 WDR46O15213 610 aaKnown RBP15.23■□□□□ 0.03
DDX41-215ENST00000512431 ADAMTS4O75173 837 aa15.23■□□□□ 0.03
DDX41-215ENST00000512431 ZNF865P0CJ78 1059 aaPredicted RBP15.23■□□□□ 0.03
DDX41-215ENST00000512431 TAL1P17542 331 aaPredicted RBP15.23■□□□□ 0.03
DDX41-215ENST00000512431 COPB2P35606 906 aa15.23■□□□□ 0.03
DDX41-215ENST00000512431 RARSP54136 660 aaKnown RBP15.23■□□□□ 0.03
DDX41-215ENST00000512431 GABPAQ06546 454 aa15.23■□□□□ 0.03
DDX41-215ENST00000512431 TMEM132BQ14DG7 1078 aa15.23■□□□□ 0.03
DDX41-215ENST00000512431 KCNA10Q16322 511 aa15.23■□□□□ 0.03
DDX41-215ENST00000512431 ZNF792Q3KQV3 632 aa15.23■□□□□ 0.03
DDX41-215ENST00000512431 TMEM240Q5SV17 173 aa15.23■□□□□ 0.03
DDX41-215ENST00000512431 PSRC1Q6PGN9 363 aaPredicted RBP15.23■□□□□ 0.03
DDX41-215ENST00000512431 CRNKL1Q9BZJ0 848 aaKnown RBP15.23■□□□□ 0.03
DDX41-215ENST00000512431 CCDC8Q9H0W5 538 aaPredicted RBP15.23■□□□□ 0.03
DDX41-215ENST00000512431 SLC28A3Q9HAS3 691 aa15.23■□□□□ 0.03
DDX41-215ENST00000512431 SWAP70Q9UH65 585 aa15.23■□□□□ 0.03
DDX41-215ENST00000512431 TBX21Q9UL17 535 aa15.23■□□□□ 0.03
DDX41-215ENST00000512431 ROBO3Q96MS0 1386 aa15.23■□□□□ 0.03
DDX41-215ENST00000512431 GRXCR1A8MXD5 290 aa15.22■□□□□ 0.03
DDX41-215ENST00000512431 TLR3O15455 904 aaKnown RBP15.22■□□□□ 0.03
DDX41-215ENST00000512431 KIAA1755Q5JYT7 1200 aa15.22■□□□□ 0.03
DDX41-215ENST00000512431 RIOX2Q8IUF8 465 aa15.22■□□□□ 0.03
DDX41-215ENST00000512431 PCSK9Q8NBP7 692 aaKnown RBP15.22■□□□□ 0.03
DDX41-215ENST00000512431 VCPKMTQ9H867 229 aa15.22■□□□□ 0.03
DDX41-215ENST00000512431 SPC25Q9HBM1 224 aa15.22■□□□□ 0.03
DDX41-215ENST00000512431 DBNLQ9UJU6 430 aaKnown RBP15.22■□□□□ 0.03
DDX41-215ENST00000512431 TMX2Q9Y320 296 aa15.22■□□□□ 0.03
DDX41-215ENST00000512431 ELP1O95163 1332 aa15.21■□□□□ 0.03
DDX41-215ENST00000512431 SYNRGQ9UMZ2 1314 aa15.21■□□□□ 0.03
DDX41-215ENST00000512431 CSF2RAP15509 400 aa15.21■□□□□ 0.03
DDX41-215ENST00000512431 STAT3P40763 770 aa15.21■□□□□ 0.03
DDX41-215ENST00000512431 ICA1Q05084 483 aa15.21■□□□□ 0.03
DDX41-215ENST00000512431 POLA2Q14181 598 aa15.21■□□□□ 0.03
DDX41-215ENST00000512431 AAK1Q2M2I8 961 aa15.21■□□□□ 0.03
DDX41-215ENST00000512431 ZNF365Q70YC5 407 aa15.21■□□□□ 0.03
DDX41-215ENST00000512431 C16orf59Q7L2K0 433 aa15.21■□□□□ 0.03
DDX41-215ENST00000512431 MSL3Q8N5Y2 521 aaKnown RBP15.21■□□□□ 0.03
DDX41-215ENST00000512431 LENG1Q96BZ8 264 aaPredicted RBP15.21■□□□□ 0.03
DDX41-215ENST00000512431 RIOK1Q9BRS2 568 aaKnown RBP15.21■□□□□ 0.03
DDX41-215ENST00000512431 TTC28Q96AY4 2481 aa15.21■□□□□ 0.02
DDX41-215ENST00000512431 DUSP11O75319 330 aaKnown RBP15.2■□□□□ 0.02
DDX41-215ENST00000512431 C6orf222P0C671 652 aaPredicted RBP15.2■□□□□ 0.02
DDX41-215ENST00000512431 ACRP10323 421 aa15.2■□□□□ 0.02
DDX41-215ENST00000512431 ATP8B2P98198 1209 aa15.2■□□□□ 0.02
DDX41-215ENST00000512431 ADGRE1Q14246 886 aa15.2■□□□□ 0.02
DDX41-215ENST00000512431 TTF1Q15361 905 aaPredicted RBP15.2■□□□□ 0.02
DDX41-215ENST00000512431 RASIP1Q5U651 963 aa15.2■□□□□ 0.02
DDX41-215ENST00000512431 KLHDC9Q8NEP7 349 aa15.2■□□□□ 0.02
DDX41-215ENST00000512431 SSH3Q8TE77 659 aa15.2■□□□□ 0.02
DDX41-215ENST00000512431 FRAT1Q92837 279 aaPredicted RBP15.2■□□□□ 0.02
DDX41-215ENST00000512431 DDX11Q96FC9 970 aa15.2■□□□□ 0.02
DDX41-215ENST00000512431 ANTXR1Q9H6X2 564 aa15.2■□□□□ 0.02
DDX41-215ENST00000512431 TLR7Q9NYK1 1049 aaKnown RBP15.2■□□□□ 0.02
DDX41-215ENST00000512431 ZHX1Q9UKY1 873 aaPredicted RBP15.2■□□□□ 0.02
DDX41-215ENST00000512431 A0A0G2JMZ2 1700 aa15.2■□□□□ 0.02
DDX41-215ENST00000512431 A0A0U1RQG5 324 aaPredicted RBP15.19■□□□□ 0.02
DDX41-215ENST00000512431 RAD21O60216 631 aa15.19■□□□□ 0.02
DDX41-215ENST00000512431 BCAR3O75815 825 aa15.19■□□□□ 0.02
DDX41-215ENST00000512431 FGBP02675 491 aa15.19■□□□□ 0.02
DDX41-215ENST00000512431 CDK7P50613 346 aa15.19■□□□□ 0.02
DDX41-215ENST00000512431 CLUAP1Q96AJ1 413 aa15.19■□□□□ 0.02
DDX41-215ENST00000512431 CCDC17Q96LX7 622 aa15.19■□□□□ 0.02
DDX41-215ENST00000512431 PPP1R12CQ9BZL4 782 aa15.19■□□□□ 0.02
DDX41-215ENST00000512431 NKX2-4Q9H2Z4 354 aa15.19■□□□□ 0.02
DDX41-215ENST00000512431 CXXC1Q9P0U4 656 aaPredicted RBP15.19■□□□□ 0.02
DDX41-215ENST00000512431 ADAMTS5Q9UNA0 930 aa15.19■□□□□ 0.02
DDX41-215ENST00000512431 SYNGAP1Q96PV0 1343 aa15.18■□□□□ 0.02
DDX41-215ENST00000512431 ARVCFO00192 962 aa15.18■□□□□ 0.02
DDX41-215ENST00000512431 VWA5AO00534 786 aa15.18■□□□□ 0.02
DDX41-215ENST00000512431 ASGR1P07306 291 aa15.18■□□□□ 0.02
DDX41-215ENST00000512431 TRIM27P14373 513 aa15.18■□□□□ 0.02
DDX41-215ENST00000512431 HOXD11P31277 338 aaPredicted RBP15.18■□□□□ 0.02
DDX41-215ENST00000512431 SLC9C2Q5TAH2 1124 aa15.18■□□□□ 0.02
DDX41-215ENST00000512431 CCSAPQ6IQ19 270 aaPredicted RBP15.18■□□□□ 0.02
DDX41-215ENST00000512431 SIAH1Q8IUQ4 282 aa15.18■□□□□ 0.02
DDX41-215ENST00000512431 AMOTL1Q8IY63 956 aa15.18■□□□□ 0.02
DDX41-215ENST00000512431 HERVK_113Q902F9 699 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms