RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 MRS2Q9HD23 443 aa11.57□□□□□ -0.56
USP53-206ENST00000510737 SMG5Q9UPR3 1016 aaKnown RBP11.57□□□□□ -0.56
USP53-206ENST00000510737 MYOCOSA0A1B0GUC4 107 aa11.56□□□□□ -0.56
USP53-206ENST00000510737 FITM1A5D6W6 292 aa11.56□□□□□ -0.56
USP53-206ENST00000510737 SLC22A31A6NKX4 558 aa11.56□□□□□ -0.56
USP53-206ENST00000510737 PDIA4P13667 645 aaKnown RBP11.56□□□□□ -0.56
USP53-206ENST00000510737 LILRA2Q8N149 483 aa11.56□□□□□ -0.56
USP53-206ENST00000510737 OXR1Q8N573 874 aa11.56□□□□□ -0.56
USP53-206ENST00000510737 LINC01599Q8WXQ3 324 aa11.56□□□□□ -0.56
USP53-206ENST00000510737 SLC26A8Q96RN1 970 aa11.56□□□□□ -0.56
USP53-206ENST00000510737 MCOLN1Q9GZU1 580 aa11.56□□□□□ -0.56
USP53-206ENST00000510737 KCNQ5Q9NR82 932 aa11.56□□□□□ -0.56
USP53-206ENST00000510737 RGS13O14921 159 aa11.55□□□□□ -0.56
USP53-206ENST00000510737 PWP1Q13610 501 aa11.55□□□□□ -0.56
USP53-206ENST00000510737 KCNN1Q92952 543 aa11.55□□□□□ -0.56
USP53-206ENST00000510737 BRMS1Q9HCU9 246 aa11.55□□□□□ -0.56
USP53-206ENST00000510737 YBX2Q9Y2T7 364 aaKnown RBP11.55□□□□□ -0.56
USP53-206ENST00000510737 PSPNO60542 156 aa11.54□□□□□ -0.56
USP53-206ENST00000510737 CRKP46108 304 aa11.54□□□□□ -0.56
USP53-206ENST00000510737 ARSHQ5FYA8 562 aa11.54□□□□□ -0.56
USP53-206ENST00000510737 AMIGO3Q86WK7 504 aa11.54□□□□□ -0.56
USP53-206ENST00000510737 USHBP1Q8N6Y0 703 aa11.54□□□□□ -0.56
USP53-206ENST00000510737 DHX38Q92620 1227 aaKnown RBP11.54□□□□□ -0.56
USP53-206ENST00000510737 INTS4Q96HW7 963 aaKnown RBP11.54□□□□□ -0.56
USP53-206ENST00000510737 HDAC8Q9BY41 377 aa11.54□□□□□ -0.56
USP53-206ENST00000510737 GREM1O60565 184 aa11.53□□□□□ -0.56
USP53-206ENST00000510737 POLR2BP30876 1174 aaKnown RBP11.53□□□□□ -0.56
USP53-206ENST00000510737 GBP1P32455 592 aa11.53□□□□□ -0.56
USP53-206ENST00000510737 IRF2BP1Q8IU81 584 aa11.53□□□□□ -0.56
USP53-206ENST00000510737 LRRC3Q9BY71 257 aa11.53□□□□□ -0.56
USP53-206ENST00000510737 PCDHB14Q9Y5E9 798 aa11.53□□□□□ -0.56
USP53-206ENST00000510737 CLASP1Q7Z460 1538 aa11.53□□□□□ -0.56
USP53-206ENST00000510737 TCAF2A6NFQ2 919 aa11.52□□□□□ -0.57
USP53-206ENST00000510737 NMIQ13287 307 aaPredicted RBP11.52□□□□□ -0.57
USP53-206ENST00000510737 SNW1Q13573 536 aaKnown RBP11.52□□□□□ -0.57
USP53-206ENST00000510737 TMC3Q7Z5M5 1100 aa11.52□□□□□ -0.57
USP53-206ENST00000510737 SLC6A17Q9H1V8 727 aa11.52□□□□□ -0.57
USP53-206ENST00000510737 AQRO60306 1485 aaKnown RBP eCLIP11.51□□□□□ -0.57
USP53-206ENST00000510737 LINC00310P59036 64 aa11.51□□□□□ -0.57
USP53-206ENST00000510737 CLEC16AQ2KHT3 1053 aa11.51□□□□□ -0.57
USP53-206ENST00000510737 ZNF605Q86T29 641 aa11.51□□□□□ -0.57
USP53-206ENST00000510737 CWC22Q9HCG8 908 aaKnown RBP11.51□□□□□ -0.57
USP53-206ENST00000510737 GPR160Q9UJ42 338 aa11.51□□□□□ -0.57
USP53-206ENST00000510737 SYTL5Q8TDW5 730 aaPredicted RBP11.5□□□□□ -0.57
USP53-206ENST00000510737 ATE1O95260 518 aa11.49□□□□□ -0.57
USP53-206ENST00000510737 EIF4A3P38919 411 aaKnown RBP11.49□□□□□ -0.57
USP53-206ENST00000510737 CWF19L2Q2TBE0 894 aaKnown RBP11.49□□□□□ -0.57
USP53-206ENST00000510737 NBPF12Q5TAG4 269 aaPredicted RBP11.49□□□□□ -0.57
USP53-206ENST00000510737 OVOS1Q6IE37 1185 aa11.49□□□□□ -0.57
USP53-206ENST00000510737 ANKS4BQ8N8V4 417 aa11.49□□□□□ -0.57
USP53-206ENST00000510737 ZNF552Q9H707 407 aaPredicted RBP11.49□□□□□ -0.57
USP53-206ENST00000510737 GCM1Q9NP62 436 aa11.49□□□□□ -0.57
USP53-206ENST00000510737 WIZO95785 1651 aa11.49□□□□□ -0.57
USP53-206ENST00000510737 TMEM82A0PJX8 343 aa11.48□□□□□ -0.57
USP53-206ENST00000510737 DLG4P78352 724 aa11.48□□□□□ -0.57
USP53-206ENST00000510737 CHRNEQ04844 493 aa11.48□□□□□ -0.57
USP53-206ENST00000510737 DUSP4Q13115 394 aa11.48□□□□□ -0.57
USP53-206ENST00000510737 NBPF9Q3BBW0 867 aa11.48□□□□□ -0.57
USP53-206ENST00000510737 TTLL10Q6ZVT0 673 aa11.48□□□□□ -0.57
USP53-206ENST00000510737 SPPL2CQ8IUH8 684 aa11.48□□□□□ -0.57
USP53-206ENST00000510737 ENOX1Q8TC92 643 aaKnown RBP11.48□□□□□ -0.57
USP53-206ENST00000510737 TCTN2Q96GX1 697 aa11.48□□□□□ -0.57
USP53-206ENST00000510737 FOXP3Q9BZS1 431 aa11.48□□□□□ -0.57
USP53-206ENST00000510737 GMIPQ9P107 970 aa11.48□□□□□ -0.57
USP53-206ENST00000510737 ADAMTS1Q9UHI8 967 aa11.48□□□□□ -0.57
USP53-206ENST00000510737 USP2O75604 605 aaPredicted RBP11.47□□□□□ -0.57
USP53-206ENST00000510737 RAG1P15918 1043 aa11.47□□□□□ -0.57
USP53-206ENST00000510737 ZPBP2Q6X784 338 aa11.47□□□□□ -0.57
USP53-206ENST00000510737 SIRT2Q8IXJ6 389 aa11.47□□□□□ -0.57
USP53-206ENST00000510737 ZNF296Q8WUU4 475 aaPredicted RBP11.47□□□□□ -0.57
USP53-206ENST00000510737 SGPP1Q9BX95 441 aa11.47□□□□□ -0.57
USP53-206ENST00000510737 MINPP1Q9UNW1 487 aa11.47□□□□□ -0.57
USP53-206ENST00000510737 SUPT16HQ9Y5B9 1047 aaKnown RBP11.47□□□□□ -0.57
USP53-206ENST00000510737 ROBO2Q9HCK4 1378 aa11.46□□□□□ -0.57
USP53-206ENST00000510737 RPL10P27635 214 aaKnown RBP11.46□□□□□ -0.57
USP53-206ENST00000510737 CCDC27Q2M243 656 aa11.46□□□□□ -0.57
USP53-206ENST00000510737 CIAPIN1Q6FI81 312 aa11.46□□□□□ -0.57
USP53-206ENST00000510737 RNF111Q6ZNA4 994 aa11.46□□□□□ -0.57
USP53-206ENST00000510737 NLRX1Q86UT6 975 aa11.46□□□□□ -0.57
USP53-206ENST00000510737 DAGLBQ8NCG7 672 aa11.46□□□□□ -0.57
USP53-206ENST00000510737 KRTAP4-2Q9BYR5 136 aa11.46□□□□□ -0.57
USP53-206ENST00000510737 EHMT1Q9H9B1 1298 aa11.46□□□□□ -0.57
USP53-206ENST00000510737 NUAK1O60285 661 aa11.45□□□□□ -0.58
USP53-206ENST00000510737 PEX10O60683 326 aa11.45□□□□□ -0.58
USP53-206ENST00000510737 CLCQ05315 142 aa11.45□□□□□ -0.58
USP53-206ENST00000510737 SNX17Q15036 470 aa11.45□□□□□ -0.58
USP53-206ENST00000510737 BBS9Q3SYG4 887 aa11.45□□□□□ -0.58
USP53-206ENST00000510737 CDCP2Q5VXM1 449 aa11.45□□□□□ -0.58
USP53-206ENST00000510737 SYTL4Q96C24 671 aaPredicted RBP11.45□□□□□ -0.58
USP53-206ENST00000510737 ATG4CQ96DT6 458 aa11.45□□□□□ -0.58
USP53-206ENST00000510737 ZNF512BQ96KM6 892 aaPredicted RBP11.45□□□□□ -0.58
USP53-206ENST00000510737 GZF1Q9H116 711 aaPredicted RBP11.45□□□□□ -0.58
USP53-206ENST00000510737 IRF2BPLQ9H1B7 796 aa11.45□□□□□ -0.58
USP53-206ENST00000510737 ANTXR1Q9H6X2 564 aa11.45□□□□□ -0.58
USP53-206ENST00000510737 UBP1Q9NZI7 540 aa11.45□□□□□ -0.58
USP53-206ENST00000510737 PDE6BP35913 854 aa11.44□□□□□ -0.58
USP53-206ENST00000510737 MRPL58Q14197 206 aaKnown RBP11.44□□□□□ -0.58
USP53-206ENST00000510737 LILRA6Q6PI73 481 aa11.44□□□□□ -0.58
USP53-206ENST00000510737 WAPLQ7Z5K2 1190 aa11.44□□□□□ -0.58
USP53-206ENST00000510737 CNNM2Q9H8M5 875 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms