RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 PEG3Q9GZU2 1588 aa10.67□□□□□ -0.7
TRAPPC11-206ENST00000509857 SHOXO15266 292 aa10.66□□□□□ -0.7
TRAPPC11-206ENST00000509857 AUHQ13825 339 aaKnown RBP10.66□□□□□ -0.7
TRAPPC11-206ENST00000509857 PPP2R5EQ16537 467 aa10.66□□□□□ -0.7
TRAPPC11-206ENST00000509857 NBPF11Q86T75 865 aa10.66□□□□□ -0.7
TRAPPC11-206ENST00000509857 SYTL5Q8TDW5 730 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC11-206ENST00000509857 HDAC8Q9BY41 377 aa10.66□□□□□ -0.7
TRAPPC11-206ENST00000509857 PRDM14Q9GZV8 571 aa10.66□□□□□ -0.7
TRAPPC11-206ENST00000509857 OAS3Q9Y6K5 1087 aaKnown RBP10.66□□□□□ -0.7
TRAPPC11-206ENST00000509857 TOP2AP11388 1531 aaKnown RBP10.66□□□□□ -0.7
TRAPPC11-206ENST00000509857 LOC100996750A0A140TA64 210 aa10.65□□□□□ -0.7
TRAPPC11-206ENST00000509857 TPP2P29144 1249 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC11-206ENST00000509857 SNW1Q13573 536 aaKnown RBP10.65□□□□□ -0.7
TRAPPC11-206ENST00000509857 AXDND1Q5T1B0 1012 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC11-206ENST00000509857 TDRD10Q5VZ19 366 aaKnown RBP10.65□□□□□ -0.7
TRAPPC11-206ENST00000509857 TMC3Q7Z5M5 1100 aa10.65□□□□□ -0.7
TRAPPC11-206ENST00000509857 TP53INP2Q8IXH6 220 aa10.65□□□□□ -0.7
TRAPPC11-206ENST00000509857 CCDC144CPQ8IYA2 1237 aa10.65□□□□□ -0.7
TRAPPC11-206ENST00000509857 KRTAP4-6Q9BYQ5 205 aa10.65□□□□□ -0.7
TRAPPC11-206ENST00000509857 ASCC2Q9H1I8 757 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC11-206ENST00000509857 PCDHB12Q9Y5F1 795 aa10.65□□□□□ -0.7
TRAPPC11-206ENST00000509857 WIZO95785 1651 aa10.65□□□□□ -0.7
TRAPPC11-206ENST00000509857 WASH4PA8MWX3 477 aa10.64□□□□□ -0.71
TRAPPC11-206ENST00000509857 SIGLEC6O43699 453 aa10.64□□□□□ -0.71
TRAPPC11-206ENST00000509857 ESR1P03372 595 aa10.64□□□□□ -0.71
TRAPPC11-206ENST00000509857 C7orf61Q8IZ16 206 aa10.64□□□□□ -0.71
TRAPPC11-206ENST00000509857 ABI1Q8IZP0 508 aa10.64□□□□□ -0.71
TRAPPC11-206ENST00000509857 KLHL6Q8WZ60 621 aa10.64□□□□□ -0.71
TRAPPC11-206ENST00000509857 SLC7A5Q01650 507 aa10.63□□□□□ -0.71
TRAPPC11-206ENST00000509857 DAGLBQ8NCG7 672 aa10.63□□□□□ -0.71
TRAPPC11-206ENST00000509857 TANGO6Q9C0B7 1094 aa10.63□□□□□ -0.71
TRAPPC11-206ENST00000509857 ACTR10Q9NZ32 417 aa10.63□□□□□ -0.71
TRAPPC11-206ENST00000509857 CBFA2T2O43439 604 aa10.62□□□□□ -0.71
TRAPPC11-206ENST00000509857 ZP2Q05996 745 aa10.62□□□□□ -0.71
TRAPPC11-206ENST00000509857 PLCL1Q15111 1095 aa10.62□□□□□ -0.71
TRAPPC11-206ENST00000509857 CLEC16AQ2KHT3 1053 aa10.62□□□□□ -0.71
TRAPPC11-206ENST00000509857 DCAF15Q66K64 600 aa10.62□□□□□ -0.71
TRAPPC11-206ENST00000509857 SLC23A3Q6PIS1 610 aa10.62□□□□□ -0.71
TRAPPC11-206ENST00000509857 ZNF655Q8N720 491 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC11-206ENST00000509857 CARS2Q9HA77 564 aaKnown RBP10.62□□□□□ -0.71
TRAPPC11-206ENST00000509857 DUSP13Q9UII6 198 aa10.62□□□□□ -0.71
TRAPPC11-206ENST00000509857 PRAMEF1O95521 474 aa10.61□□□□□ -0.71
TRAPPC11-206ENST00000509857 GNPTABQ3T906 1256 aa10.61□□□□□ -0.71
TRAPPC11-206ENST00000509857 ARMC5Q96C12 935 aa10.61□□□□□ -0.71
TRAPPC11-206ENST00000509857 PCDHB10Q9UN67 800 aa10.61□□□□□ -0.71
TRAPPC11-206ENST00000509857 TP53P04637 393 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC11-206ENST00000509857 CBLL1Q75N03 491 aa10.6□□□□□ -0.71
TRAPPC11-206ENST00000509857 CREG2Q8IUH2 290 aa10.6□□□□□ -0.71
TRAPPC11-206ENST00000509857 HAUS7Q99871 368 aa10.6□□□□□ -0.71
TRAPPC11-206ENST00000509857 GP6Q9HCN6 339 aa10.6□□□□□ -0.71
TRAPPC11-206ENST00000509857 MBNL3Q9NUK0 354 aaKnown RBP10.6□□□□□ -0.71
TRAPPC11-206ENST00000509857 GFOD1Q9NXC2 390 aa10.6□□□□□ -0.71
TRAPPC11-206ENST00000509857 ADAMTS6Q9UKP5 1117 aa10.6□□□□□ -0.71
TRAPPC11-206ENST00000509857 FBXL21Q9UKT6 434 aa10.6□□□□□ -0.71
TRAPPC11-206ENST00000509857 NCAPHQ15003 741 aa10.59□□□□□ -0.71
TRAPPC11-206ENST00000509857 VHLLQ6RSH7 139 aa10.59□□□□□ -0.71
TRAPPC11-206ENST00000509857 KLHL25Q9H0H3 589 aa10.59□□□□□ -0.71
TRAPPC11-206ENST00000509857 CHST7Q9NS84 486 aa10.59□□□□□ -0.71
TRAPPC11-206ENST00000509857 ADGRE2Q9UHX3 823 aa10.59□□□□□ -0.71
TRAPPC11-206ENST00000509857 KLF4O43474 513 aa10.58□□□□□ -0.72
TRAPPC11-206ENST00000509857 ATP2B1P20020 1258 aa10.58□□□□□ -0.72
TRAPPC11-206ENST00000509857 CD247P20963 164 aa10.58□□□□□ -0.72
TRAPPC11-206ENST00000509857 SF3A1Q15459 793 aaKnown RBP10.58□□□□□ -0.72
TRAPPC11-206ENST00000509857 ZNF792Q3KQV3 632 aa10.58□□□□□ -0.72
TRAPPC11-206ENST00000509857 PI4K2BQ8TCG2 481 aa10.58□□□□□ -0.72
TRAPPC11-206ENST00000509857 FAM86C1Q9NVL1 165 aa10.58□□□□□ -0.72
TRAPPC11-206ENST00000509857 ZNF451Q9Y4E5 1061 aa10.58□□□□□ -0.72
TRAPPC11-206ENST00000509857 PCDHA11Q9Y5I1 949 aa10.58□□□□□ -0.72
TRAPPC11-206ENST00000509857 FHOD1Q9Y613 1164 aa10.58□□□□□ -0.72
TRAPPC11-206ENST00000509857 LTKP29376 864 aa10.57□□□□□ -0.72
TRAPPC11-206ENST00000509857 XP32Q5T750 250 aa10.57□□□□□ -0.72
TRAPPC11-206ENST00000509857 KIAA1211LQ6NV74 962 aa10.57□□□□□ -0.72
TRAPPC11-206ENST00000509857 ANKS3Q6ZW76 656 aa10.57□□□□□ -0.72
TRAPPC11-206ENST00000509857 TCTN2Q96GX1 697 aa10.57□□□□□ -0.72
TRAPPC11-206ENST00000509857 SUSD2Q9UGT4 822 aa10.57□□□□□ -0.72
TRAPPC11-206ENST00000509857 ZNF281Q9Y2X9 895 aa10.57□□□□□ -0.72
TRAPPC11-206ENST00000509857 A0A087WZG4 1122 aa10.56□□□□□ -0.72
TRAPPC11-206ENST00000509857 RNASE1P07998 156 aaKnown RBP10.56□□□□□ -0.72
TRAPPC11-206ENST00000509857 ZNF445P59923 1031 aa10.56□□□□□ -0.72
TRAPPC11-206ENST00000509857 TCEAL1Q15170 157 aa10.56□□□□□ -0.72
TRAPPC11-206ENST00000509857 FXNQ16595 210 aa10.56□□□□□ -0.72
TRAPPC11-206ENST00000509857 RNF111Q6ZNA4 994 aa10.56□□□□□ -0.72
TRAPPC11-206ENST00000509857 USHBP1Q8N6Y0 703 aa10.56□□□□□ -0.72
TRAPPC11-206ENST00000509857 LINC00116Q8NCU8 138 aa10.56□□□□□ -0.72
TRAPPC11-206ENST00000509857 HNRNPLLQ8WVV9 542 aaKnown RBP10.56□□□□□ -0.72
TRAPPC11-206ENST00000509857 PRDM7Q9NQW5 492 aa10.56□□□□□ -0.72
TRAPPC11-206ENST00000509857 STK10O94804 968 aaKnown RBP10.55□□□□□ -0.72
TRAPPC11-206ENST00000509857 EPHX1P07099 455 aa10.55□□□□□ -0.72
TRAPPC11-206ENST00000509857 ITGA4P13612 1032 aa10.55□□□□□ -0.72
TRAPPC11-206ENST00000509857 CTSKP43235 329 aa10.55□□□□□ -0.72
TRAPPC11-206ENST00000509857 ZNF143P52747 638 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC11-206ENST00000509857 TEKQ02763 1124 aa10.55□□□□□ -0.72
TRAPPC11-206ENST00000509857 EGR3Q06889 387 aa10.55□□□□□ -0.72
TRAPPC11-206ENST00000509857 HEATR6Q6AI08 1181 aaKnown RBP10.55□□□□□ -0.72
TRAPPC11-206ENST00000509857 FAM178BQ8IXR5 827 aa10.55□□□□□ -0.72
TRAPPC11-206ENST00000509857 SREK1Q8WXA9 508 aaKnown RBP10.55□□□□□ -0.72
TRAPPC11-206ENST00000509857 ALPK1Q96QP1 1244 aa10.55□□□□□ -0.72
TRAPPC11-206ENST00000509857 WHRNQ9P202 907 aa10.55□□□□□ -0.72
TRAPPC11-206ENST00000509857 MINPP1Q9UNW1 487 aa10.55□□□□□ -0.72
TRAPPC11-206ENST00000509857 SMARCA2P51531 1590 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms