RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 DACT3Q96B18 629 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC13-209ENST00000508304 CRTAC1Q9NQ79 661 aa8.16□□□□□ -1.1
TRAPPC13-209ENST00000508304 IRAK3Q9Y616 596 aa8.16□□□□□ -1.1
TRAPPC13-209ENST00000508304 USP31Q70CQ4 1352 aa8.15□□□□□ -1.1
TRAPPC13-209ENST00000508304 HTR3BO95264 441 aa8.15□□□□□ -1.1
TRAPPC13-209ENST00000508304 PF4P02776 101 aa8.15□□□□□ -1.1
TRAPPC13-209ENST00000508304 CTSHP09668 335 aa8.15□□□□□ -1.1
TRAPPC13-209ENST00000508304 RPL10P27635 214 aaKnown RBP8.15□□□□□ -1.1
TRAPPC13-209ENST00000508304 NMIQ13287 307 aaPredicted RBP8.15□□□□□ -1.1
TRAPPC13-209ENST00000508304 EAPPQ56P03 285 aaPredicted RBP8.15□□□□□ -1.1
TRAPPC13-209ENST00000508304 MAP6Q96JE9 813 aa8.15□□□□□ -1.1
TRAPPC13-209ENST00000508304 RHOVQ96L33 236 aa8.15□□□□□ -1.1
TRAPPC13-209ENST00000508304 KIF2CQ99661 725 aa8.15□□□□□ -1.1
TRAPPC13-209ENST00000508304 F6X3S4 739 aa8.14□□□□□ -1.11
TRAPPC13-209ENST00000508304 EPHB3P54753 998 aa8.14□□□□□ -1.11
TRAPPC13-209ENST00000508304 DAB2P98082 770 aa8.14□□□□□ -1.11
TRAPPC13-209ENST00000508304 PHACTR4Q8IZ21 702 aa8.14□□□□□ -1.11
TRAPPC13-209ENST00000508304 DAGLBQ8NCG7 672 aa8.14□□□□□ -1.11
TRAPPC13-209ENST00000508304 CXorf38Q8TB03 319 aa8.14□□□□□ -1.11
TRAPPC13-209ENST00000508304 ASCC2Q9H1I8 757 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC13-209ENST00000508304 CNTD2Q9H8S5 307 aa8.14□□□□□ -1.11
TRAPPC13-209ENST00000508304 EPB41L4AQ9HCS5 686 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC13-209ENST00000508304 PARP2Q9UGN5 583 aa8.14□□□□□ -1.11
TRAPPC13-209ENST00000508304 N4BP3O15049 544 aa8.13□□□□□ -1.11
TRAPPC13-209ENST00000508304 GRIN3BO60391 1043 aa8.13□□□□□ -1.11
TRAPPC13-209ENST00000508304 WAPLQ7Z5K2 1190 aa8.13□□□□□ -1.11
TRAPPC13-209ENST00000508304 FOXP3Q9BZS1 431 aa8.13□□□□□ -1.11
TRAPPC13-209ENST00000508304 SIRT5Q9NXA8 310 aa8.13□□□□□ -1.11
TRAPPC13-209ENST00000508304 ZMYM5Q9UJ78 669 aa8.13□□□□□ -1.11
TRAPPC13-209ENST00000508304 ADAMTS20P59510 1910 aa8.12□□□□□ -1.11
TRAPPC13-209ENST00000508304 TMEM82A0PJX8 343 aa8.12□□□□□ -1.11
TRAPPC13-209ENST00000508304 VIPR1P32241 457 aa8.12□□□□□ -1.11
TRAPPC13-209ENST00000508304 AFF3P51826 1226 aaKnown RBP8.12□□□□□ -1.11
TRAPPC13-209ENST00000508304 YBX1P67809 324 aaKnown RBP8.12□□□□□ -1.11
TRAPPC13-209ENST00000508304 SLC14A2Q15849 920 aa8.12□□□□□ -1.11
TRAPPC13-209ENST00000508304 CEP128Q6ZU80 1094 aa8.12□□□□□ -1.11
TRAPPC13-209ENST00000508304 TCTN2Q96GX1 697 aa8.12□□□□□ -1.11
TRAPPC13-209ENST00000508304 HHIPL1Q96JK4 782 aa8.12□□□□□ -1.11
TRAPPC13-209ENST00000508304 ANKRD33BA6NCL7 494 aa8.11□□□□□ -1.11
TRAPPC13-209ENST00000508304 OTOL1A6NHN0 477 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC13-209ENST00000508304 SLC22A31A6NKX4 558 aa8.11□□□□□ -1.11
TRAPPC13-209ENST00000508304 IRS4O14654 1257 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC13-209ENST00000508304 RGS13O14921 159 aa8.11□□□□□ -1.11
TRAPPC13-209ENST00000508304 SASH1O94885 1247 aa8.11□□□□□ -1.11
TRAPPC13-209ENST00000508304 PNLIPP16233 465 aa8.11□□□□□ -1.11
TRAPPC13-209ENST00000508304 GBP1P32455 592 aa8.11□□□□□ -1.11
TRAPPC13-209ENST00000508304 KRTAP10-2P60368 255 aa8.11□□□□□ -1.11
TRAPPC13-209ENST00000508304 PSMD2Q13200 908 aa8.11□□□□□ -1.11
TRAPPC13-209ENST00000508304 ZNF655Q8N720 491 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC13-209ENST00000508304 LINC00116Q8NCU8 138 aa8.11□□□□□ -1.11
TRAPPC13-209ENST00000508304 TCFL5Q9UL49 500 aa8.11□□□□□ -1.11
TRAPPC13-209ENST00000508304 RNF4P78317 190 aa8.1□□□□□ -1.11
TRAPPC13-209ENST00000508304 MPP2Q14168 576 aa8.1□□□□□ -1.11
TRAPPC13-209ENST00000508304 SKOR2Q2VWA4 1001 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC13-209ENST00000508304 REC114Q7Z4M0 266 aa8.1□□□□□ -1.11
TRAPPC13-209ENST00000508304 TMEM74Q96NL1 305 aa8.1□□□□□ -1.11
TRAPPC13-209ENST00000508304 PLCD4Q9BRC7 762 aa8.1□□□□□ -1.11
TRAPPC13-209ENST00000508304 UBOX5O94941 541 aa8.09□□□□□ -1.11
TRAPPC13-209ENST00000508304 CDR1P51861 262 aa8.09□□□□□ -1.11
TRAPPC13-209ENST00000508304 PCBP3P57721 371 aaKnown RBP8.09□□□□□ -1.11
TRAPPC13-209ENST00000508304 ERVFRD-1P60508 538 aa8.09□□□□□ -1.11
TRAPPC13-209ENST00000508304 BBS9Q3SYG4 887 aa8.09□□□□□ -1.11
TRAPPC13-209ENST00000508304 DBX2Q6ZNG2 339 aa8.09□□□□□ -1.11
TRAPPC13-209ENST00000508304 TMC3Q7Z5M5 1100 aa8.09□□□□□ -1.11
TRAPPC13-209ENST00000508304 TMEFF1Q8IYR6 380 aa8.09□□□□□ -1.11
TRAPPC13-209ENST00000508304 RSRP1Q9BUV0 290 aa8.09□□□□□ -1.11
TRAPPC13-209ENST00000508304 SDHBP21912 280 aa8.08□□□□□ -1.12
TRAPPC13-209ENST00000508304 CHMP4BP1P59074 171 aa8.08□□□□□ -1.12
TRAPPC13-209ENST00000508304 NBPF9Q3BBW0 867 aa8.08□□□□□ -1.12
TRAPPC13-209ENST00000508304 ZPBP2Q6X784 338 aa8.08□□□□□ -1.12
TRAPPC13-209ENST00000508304 TMC4Q7Z404 712 aa8.08□□□□□ -1.12
TRAPPC13-209ENST00000508304 TIMELESSQ9UNS1 1208 aa8.08□□□□□ -1.12
TRAPPC13-209ENST00000508304 ABLIM1O14639 778 aa8.07□□□□□ -1.12
TRAPPC13-209ENST00000508304 GARTP22102 1010 aa8.07□□□□□ -1.12
TRAPPC13-209ENST00000508304 GBP2P32456 591 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC13-209ENST00000508304 FAM160A1Q05DH4 1040 aa8.07□□□□□ -1.12
TRAPPC13-209ENST00000508304 SNW1Q13573 536 aaKnown RBP8.07□□□□□ -1.12
TRAPPC13-209ENST00000508304 NBPF12Q5TAG4 269 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC13-209ENST00000508304 OLFML2BQ68BL8 750 aa8.07□□□□□ -1.12
TRAPPC13-209ENST00000508304 RELL1Q8IUW5 271 aa8.07□□□□□ -1.12
TRAPPC13-209ENST00000508304 FBXO27Q8NI29 283 aa8.07□□□□□ -1.12
TRAPPC13-209ENST00000508304 FEZF2Q8TBJ5 459 aa8.07□□□□□ -1.12
TRAPPC13-209ENST00000508304 MZB1Q8WU39 189 aa8.07□□□□□ -1.12
TRAPPC13-209ENST00000508304 CRELD1Q96HD1 420 aa8.07□□□□□ -1.12
TRAPPC13-209ENST00000508304 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.07□□□□□ -1.12
TRAPPC13-209ENST00000508304 SSU72P8A0A1W2PR75 194 aa8.06□□□□□ -1.12
TRAPPC13-209ENST00000508304 SYPP08247 313 aa8.06□□□□□ -1.12
TRAPPC13-209ENST00000508304 RTP1P59025 263 aa8.06□□□□□ -1.12
TRAPPC13-209ENST00000508304 SNAP47Q5SQN1 464 aa8.06□□□□□ -1.12
TRAPPC13-209ENST00000508304 GOLM1Q8NBJ4 401 aa8.06□□□□□ -1.12
TRAPPC13-209ENST00000508304 KLHL14Q9P2G3 628 aa8.06□□□□□ -1.12
TRAPPC13-209ENST00000508304 FADS2P1A8MWK0 482 aa8.05□□□□□ -1.12
TRAPPC13-209ENST00000508304 FKTNO75072 461 aa8.05□□□□□ -1.12
TRAPPC13-209ENST00000508304 NFKB2Q00653 900 aa8.05□□□□□ -1.12
TRAPPC13-209ENST00000508304 PWP1Q13610 501 aa8.05□□□□□ -1.12
TRAPPC13-209ENST00000508304 VMACQ2NL98 169 aa8.05□□□□□ -1.12
TRAPPC13-209ENST00000508304 ARSHQ5FYA8 562 aa8.05□□□□□ -1.12
TRAPPC13-209ENST00000508304 CNKSR3Q6P9H4 555 aa8.05□□□□□ -1.12
TRAPPC13-209ENST00000508304 FAM129CQ86XR2 697 aa8.05□□□□□ -1.12
TRAPPC13-209ENST00000508304 SP8Q8IXZ3 490 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms