RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 ZNF454Q8N9F8 522 aa7.03□□□□□ -1.28
GYPB-208ENST00000507009 ARRDC4Q8NCT1 418 aa7.03□□□□□ -1.28
GYPB-208ENST00000507009 PPM1EQ8WY54 764 aa7.03□□□□□ -1.28
GYPB-208ENST00000507009 KCNK17Q96T54 332 aa7.03□□□□□ -1.28
GYPB-208ENST00000507009 CCDC8Q9H0W5 538 aaPredicted RBP7.03□□□□□ -1.28
GYPB-208ENST00000507009 SEMA6BQ9H3T3 888 aa7.03□□□□□ -1.28
GYPB-208ENST00000507009 C1orf115Q9H7X2 142 aa7.03□□□□□ -1.28
GYPB-208ENST00000507009 CABP5Q9NP86 173 aa7.03□□□□□ -1.28
GYPB-208ENST00000507009 FPGT-TNNI3KV9GXZ4 949 aa7.03□□□□□ -1.28
GYPB-208ENST00000507009 SPDYE16A6NNV3 312 aaPredicted RBP7.02□□□□□ -1.29
GYPB-208ENST00000507009 HRO43593 1189 aa7.02□□□□□ -1.29
GYPB-208ENST00000507009 RAD21O60216 631 aa7.02□□□□□ -1.29
GYPB-208ENST00000507009 SURF6O75683 361 aaKnown RBP7.02□□□□□ -1.29
GYPB-208ENST00000507009 BCAR3O75815 825 aa7.02□□□□□ -1.29
GYPB-208ENST00000507009 POLR3DP05423 398 aaPredicted RBP7.02□□□□□ -1.29
GYPB-208ENST00000507009 RARSP54136 660 aaKnown RBP7.02□□□□□ -1.29
GYPB-208ENST00000507009 USP14P54578 494 aa7.02□□□□□ -1.29
GYPB-208ENST00000507009 PPP4CP60510 307 aa7.02□□□□□ -1.29
GYPB-208ENST00000507009 GRB14Q14449 540 aa7.02□□□□□ -1.29
GYPB-208ENST00000507009 SEPT2Q15019 361 aa7.02□□□□□ -1.29
GYPB-208ENST00000507009 NCAPG2Q86XI2 1143 aa7.02□□□□□ -1.29
GYPB-208ENST00000507009 MAGEB6Q8N7X4 407 aa7.02□□□□□ -1.29
GYPB-208ENST00000507009 RNPC3Q96LT9 517 aaKnown RBP7.02□□□□□ -1.29
GYPB-208ENST00000507009 TTYH1Q9H313 450 aaPredicted RBP7.02□□□□□ -1.29
GYPB-208ENST00000507009 GINM1Q9NU53 330 aa7.02□□□□□ -1.29
GYPB-208ENST00000507009 TLR7Q9NYK1 1049 aaKnown RBP7.02□□□□□ -1.29
GYPB-208ENST00000507009 SERPINB13Q9UIV8 391 aa7.02□□□□□ -1.29
GYPB-208ENST00000507009 LAMA2P24043 3122 aaKnown RBP7.02□□□□□ -1.29
GYPB-208ENST00000507009 RLFQ13129 1914 aa7.01□□□□□ -1.29
GYPB-208ENST00000507009 NAV1Q8NEY1 1877 aa7.01□□□□□ -1.29
GYPB-208ENST00000507009 TRIM43BA6NCK2 446 aa7.01□□□□□ -1.29
GYPB-208ENST00000507009 PQBP1O60828 265 aaKnown RBP7.01□□□□□ -1.29
GYPB-208ENST00000507009 CYBAP13498 195 aa7.01□□□□□ -1.29
GYPB-208ENST00000507009 ERCC3P19447 782 aa7.01□□□□□ -1.29
GYPB-208ENST00000507009 PLCD1P51178 756 aa7.01□□□□□ -1.29
GYPB-208ENST00000507009 TLE2Q04725 743 aa7.01□□□□□ -1.29
GYPB-208ENST00000507009 MTX1Q13505 466 aa7.01□□□□□ -1.29
GYPB-208ENST00000507009 LRRC41Q15345 812 aa7.01□□□□□ -1.29
GYPB-208ENST00000507009 FAM47AQ5JRC9 791 aa7.01□□□□□ -1.29
GYPB-208ENST00000507009 TTC6Q86TZ1 520 aa7.01□□□□□ -1.29
GYPB-208ENST00000507009 METTL16Q86W50 562 aaKnown RBP7.01□□□□□ -1.29
GYPB-208ENST00000507009 SPICE1Q8N0Z3 855 aa7.01□□□□□ -1.29
GYPB-208ENST00000507009 TRIM43Q96BQ3 446 aaPredicted RBP7.01□□□□□ -1.29
GYPB-208ENST00000507009 C12orf42Q96LP6 360 aa7.01□□□□□ -1.29
GYPB-208ENST00000507009 LARP6Q9BRS8 491 aaKnown RBP7.01□□□□□ -1.29
GYPB-208ENST00000507009 MOV10L1Q9BXT6 1211 aaKnown RBP7.01□□□□□ -1.29
GYPB-208ENST00000507009 KIAA1683Q9H0B3 1180 aa7.01□□□□□ -1.29
GYPB-208ENST00000507009 PRDM6Q9NQX0 595 aa7.01□□□□□ -1.29
GYPB-208ENST00000507009 PDLIM7Q9NR12 457 aa7.01□□□□□ -1.29
GYPB-208ENST00000507009 HCSTQ9UBK5 93 aa7.01□□□□□ -1.29
GYPB-208ENST00000507009 IPO8O15397 1037 aaKnown RBP7□□□□□ -1.29
GYPB-208ENST00000507009 SEPT4O43236 478 aa7□□□□□ -1.29
GYPB-208ENST00000507009 COBLO75128 1261 aa7□□□□□ -1.29
GYPB-208ENST00000507009 FLOT1O75955 427 aa7□□□□□ -1.29
GYPB-208ENST00000507009 PGK1P00558 417 aa7□□□□□ -1.29
GYPB-208ENST00000507009 TRIM27P14373 513 aa7□□□□□ -1.29
GYPB-208ENST00000507009 RAG1P15918 1043 aa7□□□□□ -1.29
GYPB-208ENST00000507009 SHMT1P34896 483 aa7□□□□□ -1.29
GYPB-208ENST00000507009 SLC4A3P48751 1232 aa7□□□□□ -1.29
GYPB-208ENST00000507009 EPHB4P54760 987 aa7□□□□□ -1.29
GYPB-208ENST00000507009 SMAD3P84022 425 aaKnown RBP7□□□□□ -1.29
GYPB-208ENST00000507009 COG2Q14746 738 aa7□□□□□ -1.29
GYPB-208ENST00000507009 TATDN1Q6P1N9 297 aa7□□□□□ -1.29
GYPB-208ENST00000507009 CLEC10AQ8IUN9 316 aa7□□□□□ -1.29
GYPB-208ENST00000507009 LENG1Q96BZ8 264 aaPredicted RBP7□□□□□ -1.29
GYPB-208ENST00000507009 ATG4CQ96DT6 458 aa7□□□□□ -1.29
GYPB-208ENST00000507009 DDX27Q96GQ7 796 aaKnown RBP7□□□□□ -1.29
GYPB-208ENST00000507009 SPATC1LQ9H0A9 340 aa7□□□□□ -1.29
GYPB-208ENST00000507009 ANTXR1Q9H6X2 564 aa7□□□□□ -1.29
GYPB-208ENST00000507009 XPNPEP3Q9NQH7 507 aa7□□□□□ -1.29
GYPB-208ENST00000507009 SLC5A4Q9NY91 659 aa7□□□□□ -1.29
GYPB-208ENST00000507009 RAPGEFL1Q9UHV5 662 aa7□□□□□ -1.29
GYPB-208ENST00000507009 EYSQ5T1H1 3165 aa7□□□□□ -1.29
GYPB-208ENST00000507009 MYH8P13535 1937 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 MAGEB6P1A0A0J9YX57 407 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 A0A1W2PRG0 241 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 APBB1O00213 710 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 PGK2P07205 417 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 CLTBP09497 229 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 HOXC6P09630 235 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 CT47B1P0C2W7 299 aaPredicted RBP6.99□□□□□ -1.29
GYPB-208ENST00000507009 CYP2D6P10635 497 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 RARBP10826 455 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 FCER1AP12319 257 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 ITGB8P26012 769 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 GUCY1A2P33402 732 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 PLCB2Q00722 1185 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 MAP3K12Q12852 859 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 GRIN2CQ14957 1233 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 OLFML2BQ68BL8 750 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 LBX2Q6XYB7 198 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 CCDC129Q6ZRS4 1044 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 TMEM57Q8N5G2 664 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 USP38Q8NB14 1042 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 SLC44A5Q8NCS7 719 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 SYMPKQ92797 1274 aaKnown RBP6.99□□□□□ -1.29
GYPB-208ENST00000507009 MAML3Q96JK9 1138 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 GPR108Q9NPR9 543 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 TMEM39AQ9NV64 488 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 MCM9Q9NXL9 1143 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms