RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 EVCP57679 992 aa9.91□□□□□ -0.82
PDGFC-205ENST00000506880 KLRC3Q07444 240 aa9.91□□□□□ -0.82
PDGFC-205ENST00000506880 WTAPQ15007 396 aa9.91□□□□□ -0.82
PDGFC-205ENST00000506880 SEC23AQ15436 765 aa9.91□□□□□ -0.82
PDGFC-205ENST00000506880 TAF1CQ15572 869 aaPredicted RBP9.91□□□□□ -0.82
PDGFC-205ENST00000506880 PKN2Q16513 984 aaKnown RBP9.91□□□□□ -0.82
PDGFC-205ENST00000506880 C8orf34Q49A92 452 aa9.91□□□□□ -0.82
PDGFC-205ENST00000506880 GPAT2Q6NUI2 795 aa9.91□□□□□ -0.82
PDGFC-205ENST00000506880 BLOC1S2Q6QNY1 142 aa9.91□□□□□ -0.82
PDGFC-205ENST00000506880 SYNE3Q6ZMZ3 975 aa9.91□□□□□ -0.82
PDGFC-205ENST00000506880 SIAH1Q8IUQ4 282 aa9.91□□□□□ -0.82
PDGFC-205ENST00000506880 ENAHQ8N8S7 591 aaPredicted RBP9.91□□□□□ -0.82
PDGFC-205ENST00000506880 SHCBP1Q8NEM2 672 aa9.91□□□□□ -0.82
PDGFC-205ENST00000506880 ERO1AQ96HE7 468 aa9.91□□□□□ -0.82
PDGFC-205ENST00000506880 ZSWIM6Q9HCJ5 1215 aa9.91□□□□□ -0.82
PDGFC-205ENST00000506880 IL17RBQ9NRM6 502 aa9.91□□□□□ -0.82
PDGFC-205ENST00000506880 CLIP2Q9UDT6 1046 aa9.91□□□□□ -0.82
PDGFC-205ENST00000506880 MYH6P13533 1939 aa9.91□□□□□ -0.82
PDGFC-205ENST00000506880 ADGRA2Q96PE1 1338 aa9.9□□□□□ -0.82
PDGFC-205ENST00000506880 MGAMO43451 1857 aa9.9□□□□□ -0.82
PDGFC-205ENST00000506880 LOC102724159A0A0B4J2E5 919 aa9.9□□□□□ -0.82
PDGFC-205ENST00000506880 A0A1W2PRG0 241 aa9.9□□□□□ -0.82
PDGFC-205ENST00000506880 IGF2BP3O00425 579 aaKnown RBP eCLIP9.9□□□□□ -0.82
PDGFC-205ENST00000506880 IFIT3O14879 490 aaKnown RBP9.9□□□□□ -0.82
PDGFC-205ENST00000506880 PRDM1O75626 825 aa9.9□□□□□ -0.82
PDGFC-205ENST00000506880 SLC25A27O95847 323 aa9.9□□□□□ -0.82
PDGFC-205ENST00000506880 BMP3P12645 472 aa9.9□□□□□ -0.82
PDGFC-205ENST00000506880 HOXD10P28358 340 aa9.9□□□□□ -0.82
PDGFC-205ENST00000506880 SLC1A4P43007 532 aa9.9□□□□□ -0.82
PDGFC-205ENST00000506880 EXOSC10Q01780 885 aaKnown RBP9.9□□□□□ -0.82
PDGFC-205ENST00000506880 KIF22Q14807 665 aa9.9□□□□□ -0.82
PDGFC-205ENST00000506880 PWP2Q15269 919 aaKnown RBP9.9□□□□□ -0.82
PDGFC-205ENST00000506880 TKFCQ3LXA3 575 aa9.9□□□□□ -0.82
PDGFC-205ENST00000506880 RRP12Q5JTH9 1297 aaKnown RBP9.9□□□□□ -0.82
PDGFC-205ENST00000506880 GADL1Q6ZQY3 521 aa9.9□□□□□ -0.82
PDGFC-205ENST00000506880 CATIPQ7Z7H3 387 aa9.9□□□□□ -0.82
PDGFC-205ENST00000506880 ABRAQ8N0Z2 381 aa9.9□□□□□ -0.82
PDGFC-205ENST00000506880 PNMA1Q8ND90 353 aa9.9□□□□□ -0.82
PDGFC-205ENST00000506880 IGDCC4Q8TDY8 1250 aa9.9□□□□□ -0.82
PDGFC-205ENST00000506880 SMCR8Q8TEV9 937 aaPredicted RBP9.9□□□□□ -0.82
PDGFC-205ENST00000506880 PTPN18Q99952 460 aa9.9□□□□□ -0.82
PDGFC-205ENST00000506880 TANGO6Q9C0B7 1094 aa9.9□□□□□ -0.82
PDGFC-205ENST00000506880 RBM28Q9NW13 759 aaKnown RBP9.9□□□□□ -0.82
PDGFC-205ENST00000506880 RNF186Q9NXI6 227 aa9.9□□□□□ -0.82
PDGFC-205ENST00000506880 CYP46A1Q9Y6A2 500 aa9.9□□□□□ -0.82
PDGFC-205ENST00000506880 ZNF236Q9UL36 1845 aa9.89□□□□□ -0.83
PDGFC-205ENST00000506880 STRNO43815 780 aa9.89□□□□□ -0.83
PDGFC-205ENST00000506880 AOC2O75106 756 aa9.89□□□□□ -0.83
PDGFC-205ENST00000506880 NDUFB10O96000 172 aa9.89□□□□□ -0.83
PDGFC-205ENST00000506880 MAPK4P31152 587 aa9.89□□□□□ -0.83
PDGFC-205ENST00000506880 HERVK_113P62684 666 aa9.89□□□□□ -0.83
PDGFC-205ENST00000506880 JAG1P78504 1218 aa9.89□□□□□ -0.83
PDGFC-205ENST00000506880 SLC4A8Q2Y0W8 1093 aa9.89□□□□□ -0.83
PDGFC-205ENST00000506880 TMEM67Q5HYA8 995 aa9.89□□□□□ -0.83
PDGFC-205ENST00000506880 FAM47AQ5JRC9 791 aa9.89□□□□□ -0.83
PDGFC-205ENST00000506880 SLFN13Q68D06 897 aa9.89□□□□□ -0.83
PDGFC-205ENST00000506880 C17orf99Q6UX52 265 aa9.89□□□□□ -0.83
PDGFC-205ENST00000506880 RUFY3Q7L099 469 aa9.89□□□□□ -0.83
PDGFC-205ENST00000506880 TRMT44Q8IYL2 757 aaKnown RBP9.89□□□□□ -0.83
PDGFC-205ENST00000506880 ACER1Q8TDN7 264 aa9.89□□□□□ -0.83
PDGFC-205ENST00000506880 SLF1Q9BQI6 1058 aa9.89□□□□□ -0.83
PDGFC-205ENST00000506880 TMEM47Q9BQJ4 181 aa9.89□□□□□ -0.83
PDGFC-205ENST00000506880 ASCC2Q9H1I8 757 aaPredicted RBP9.89□□□□□ -0.83
PDGFC-205ENST00000506880 MAP3K20Q9NYL2 800 aaKnown RBP9.89□□□□□ -0.83
PDGFC-205ENST00000506880 FBXO40Q9UH90 709 aa9.89□□□□□ -0.83
PDGFC-205ENST00000506880 PPP1R9AQ9ULJ8 1098 aa9.89□□□□□ -0.83
PDGFC-205ENST00000506880 FZD1Q9UP38 647 aa9.89□□□□□ -0.83
PDGFC-205ENST00000506880 SNX14Q9Y5W7 946 aa9.89□□□□□ -0.83
PDGFC-205ENST00000506880 CCDC69A6NI79 296 aa9.88□□□□□ -0.83
PDGFC-205ENST00000506880 hCG_1984214I3L0E3 225 aa9.88□□□□□ -0.83
PDGFC-205ENST00000506880 SH2B2O14492 632 aaPredicted RBP9.88□□□□□ -0.83
PDGFC-205ENST00000506880 PRC1O43663 620 aa9.88□□□□□ -0.83
PDGFC-205ENST00000506880 DHX16O60231 1041 aaKnown RBP9.88□□□□□ -0.83
PDGFC-205ENST00000506880 FKTNO75072 461 aa9.88□□□□□ -0.83
PDGFC-205ENST00000506880 PARP1P09874 1014 aaKnown RBP9.88□□□□□ -0.83
PDGFC-205ENST00000506880 PDHBP11177 359 aa9.88□□□□□ -0.83
PDGFC-205ENST00000506880 BCRP11274 1271 aa9.88□□□□□ -0.83
PDGFC-205ENST00000506880 RPS6KB1P23443 525 aa9.88□□□□□ -0.83
PDGFC-205ENST00000506880 MCM2P49736 904 aa9.88□□□□□ -0.83
PDGFC-205ENST00000506880 SP3Q02447 781 aa9.88□□□□□ -0.83
PDGFC-205ENST00000506880 ZNF543Q08ER8 600 aa9.88□□□□□ -0.83
PDGFC-205ENST00000506880 TROAPQ12815 778 aa9.88□□□□□ -0.83
PDGFC-205ENST00000506880 IRF5Q13568 498 aa9.88□□□□□ -0.83
PDGFC-205ENST00000506880 STOX1Q6ZVD7 989 aa9.88□□□□□ -0.83
PDGFC-205ENST00000506880 SKAP1Q86WV1 359 aa9.88□□□□□ -0.83
PDGFC-205ENST00000506880 FAM43AQ8N2R8 423 aa9.88□□□□□ -0.83
PDGFC-205ENST00000506880 ZNF713Q8N859 430 aaPredicted RBP9.88□□□□□ -0.83
PDGFC-205ENST00000506880 CTCFLQ8NI51 663 aaPredicted RBP9.88□□□□□ -0.83
PDGFC-205ENST00000506880 ZNF274Q96GC6 653 aaPredicted RBP9.88□□□□□ -0.83
PDGFC-205ENST00000506880 MROH8Q9H579 483 aa9.88□□□□□ -0.83
PDGFC-205ENST00000506880 RPAP3Q9H6T3 665 aaPredicted RBP9.88□□□□□ -0.83
PDGFC-205ENST00000506880 LY9Q9HBG7 655 aa9.88□□□□□ -0.83
PDGFC-205ENST00000506880 SPDYE16A6NNV3 312 aaPredicted RBP9.87□□□□□ -0.83
PDGFC-205ENST00000506880 GPR25O00155 361 aa9.87□□□□□ -0.83
PDGFC-205ENST00000506880 ZBED4O75132 1171 aa9.87□□□□□ -0.83
PDGFC-205ENST00000506880 FLOT1O75955 427 aa9.87□□□□□ -0.83
PDGFC-205ENST00000506880 ATP2B2Q01814 1243 aa9.87□□□□□ -0.83
PDGFC-205ENST00000506880 EVX2Q03828 476 aa9.87□□□□□ -0.83
PDGFC-205ENST00000506880 CRHR2Q13324 411 aa9.87□□□□□ -0.83
PDGFC-205ENST00000506880 RASEFQ8IZ41 740 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms