RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 Q7L0L9 218 aa6.03□□□□□ -1.44
CPNE4-207ENST00000506687 LAPTM4BQ86VI4 370 aa6.03□□□□□ -1.44
CPNE4-207ENST00000506687 RASAL3Q86YV0 1011 aa6.03□□□□□ -1.44
CPNE4-207ENST00000506687 SMC5Q8IY18 1101 aa6.03□□□□□ -1.44
CPNE4-207ENST00000506687 RASGRP4Q8TDF6 673 aa6.03□□□□□ -1.44
CPNE4-207ENST00000506687 BAP1Q92560 729 aa6.03□□□□□ -1.44
CPNE4-207ENST00000506687 C2orf49Q9BVC5 232 aaPredicted RBP6.03□□□□□ -1.44
CPNE4-207ENST00000506687 RTFDC1Q9BY42 306 aaPredicted RBP6.03□□□□□ -1.44
CPNE4-207ENST00000506687 ZBTB40Q9NUA8 1239 aa6.03□□□□□ -1.44
CPNE4-207ENST00000506687 FANCLQ9NW38 375 aa6.03□□□□□ -1.44
CPNE4-207ENST00000506687 BSDC1Q9NW68 430 aaPredicted RBP6.03□□□□□ -1.44
CPNE4-207ENST00000506687 SNTG2Q9NY99 539 aa6.03□□□□□ -1.44
CPNE4-207ENST00000506687 PRR12Q9ULL5 1215 aa6.03□□□□□ -1.44
CPNE4-207ENST00000506687 PTPN22Q9Y2R2 807 aa6.03□□□□□ -1.44
CPNE4-207ENST00000506687 PCDHB3Q9Y5E6 796 aa6.03□□□□□ -1.44
CPNE4-207ENST00000506687 NR2E3Q9Y5X4 410 aa6.03□□□□□ -1.44
CPNE4-207ENST00000506687 CCDC88AQ3V6T2 1871 aa6.02□□□□□ -1.44
CPNE4-207ENST00000506687 TMEM265A0A087WTH1 108 aa6.02□□□□□ -1.45
CPNE4-207ENST00000506687 FAM221BA6H8Z2 402 aa6.02□□□□□ -1.45
CPNE4-207ENST00000506687 PPEF1O14829 653 aaPredicted RBP6.02□□□□□ -1.45
CPNE4-207ENST00000506687 GNAI2P04899 355 aa6.02□□□□□ -1.45
CPNE4-207ENST00000506687 UBTFL1P0CB47 393 aaPredicted RBP6.02□□□□□ -1.45
CPNE4-207ENST00000506687 TM4SF4P48230 202 aa6.02□□□□□ -1.45
CPNE4-207ENST00000506687 NASPP49321 788 aaPredicted RBP6.02□□□□□ -1.45
CPNE4-207ENST00000506687 HIRAP54198 1017 aaPredicted RBP6.02□□□□□ -1.45
CPNE4-207ENST00000506687 ATP8B2P98198 1209 aa6.02□□□□□ -1.45
CPNE4-207ENST00000506687 MAP3K12Q12852 859 aa6.02□□□□□ -1.45
CPNE4-207ENST00000506687 SLC4A8Q2Y0W8 1093 aa6.02□□□□□ -1.45
CPNE4-207ENST00000506687 LINC01559Q495D7 138 aa6.02□□□□□ -1.45
CPNE4-207ENST00000506687 C4orf48Q5BLP8 95 aa6.02□□□□□ -1.45
CPNE4-207ENST00000506687 KRT26Q7Z3Y9 468 aa6.02□□□□□ -1.45
CPNE4-207ENST00000506687 SLC9A9Q8IVB4 645 aa6.02□□□□□ -1.45
CPNE4-207ENST00000506687 ITPRIPQ8IWB1 547 aa6.02□□□□□ -1.45
CPNE4-207ENST00000506687 CCAR1Q8IX12 1150 aaKnown RBP6.02□□□□□ -1.45
CPNE4-207ENST00000506687 FTSJ3Q8IY81 847 aaKnown RBP6.02□□□□□ -1.45
CPNE4-207ENST00000506687 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.02□□□□□ -1.45
CPNE4-207ENST00000506687 SEC16BQ96JE7 1060 aa6.02□□□□□ -1.45
CPNE4-207ENST00000506687 ZNF333Q96JL9 665 aa6.02□□□□□ -1.45
CPNE4-207ENST00000506687 DEPDC7Q96QD5 511 aa6.02□□□□□ -1.45
CPNE4-207ENST00000506687 SPOCK3Q9BQ16 436 aa6.02□□□□□ -1.45
CPNE4-207ENST00000506687 SLC4A5Q9BY07 1137 aa6.02□□□□□ -1.45
CPNE4-207ENST00000506687 OSBPL7Q9BZF2 842 aa6.02□□□□□ -1.45
CPNE4-207ENST00000506687 C12orf49Q9H741 205 aa6.02□□□□□ -1.45
CPNE4-207ENST00000506687 KANSL2Q9H9L4 492 aa6.02□□□□□ -1.45
CPNE4-207ENST00000506687 MINPP1Q9UNW1 487 aa6.02□□□□□ -1.45
CPNE4-207ENST00000506687 HDAC5Q9UQL6 1122 aa6.02□□□□□ -1.45
CPNE4-207ENST00000506687 LRRFIP2Q9Y608 721 aaKnown RBP6.02□□□□□ -1.45
CPNE4-207ENST00000506687 SPTBN5Q9NRC6 3674 aaKnown RBP6.02□□□□□ -1.45
CPNE4-207ENST00000506687 LRRC37AA6NMS7 1700 aa6.02□□□□□ -1.45
CPNE4-207ENST00000506687 RPTORQ8N122 1335 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 RANBP2P49792 3224 aaKnown RBP6.01□□□□□ -1.45
CPNE4-207ENST00000506687 CACNA1SQ13698 1873 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 TRPM7Q96QT4 1865 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 ANKRD18BA2A2Z9 1011 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 WTIPA6NIX2 430 aaPredicted RBP6.01□□□□□ -1.45
CPNE4-207ENST00000506687 TNFRSF10AO00220 468 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 INHAP05111 366 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 GMPSP49915 693 aaPredicted RBP6.01□□□□□ -1.45
CPNE4-207ENST00000506687 GPSM2P81274 684 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 IFIT5Q13325 482 aaKnown RBP6.01□□□□□ -1.45
CPNE4-207ENST00000506687 C8orf34Q49A92 452 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 DMRTA1Q5VZB9 504 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 PI16Q6UXB8 463 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 ERMP1Q7Z2K6 904 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 NBPF11Q86T75 865 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 ANKRD18AQ8IVF6 992 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 SIRT2Q8IXJ6 389 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 ETFBKMTQ8IXQ9 262 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 NIM1KQ8IY84 436 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 SSH3Q8TE77 659 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 SH3TC2Q8TF17 1288 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 CCDC136Q96JN2 1154 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 CDC5LQ99459 802 aaKnown RBP6.01□□□□□ -1.45
CPNE4-207ENST00000506687 SPSB2Q99619 263 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 SPON2Q9BUD6 331 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 HTATIP2Q9BUP3 242 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 PUS3Q9BZE2 481 aaKnown RBP6.01□□□□□ -1.45
CPNE4-207ENST00000506687 NBPF3Q9H094 633 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 DNAJC25Q9H1X3 360 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.01□□□□□ -1.45
CPNE4-207ENST00000506687 POLLQ9UGP5 575 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 DDX19BQ9UMR2 479 aa6.01□□□□□ -1.45
CPNE4-207ENST00000506687 SUPT16HQ9Y5B9 1047 aaKnown RBP6.01□□□□□ -1.45
CPNE4-207ENST00000506687 IRS2Q9Y4H2 1338 aa6□□□□□ -1.45
CPNE4-207ENST00000506687 TRIOBPQ9H2D6 2365 aa6□□□□□ -1.45
CPNE4-207ENST00000506687 PNMA6EA0A0J9YXQ4 647 aa6□□□□□ -1.45
CPNE4-207ENST00000506687 A6NHS1 94 aa6□□□□□ -1.45
CPNE4-207ENST00000506687 CPNE3O75131 537 aaKnown RBP6□□□□□ -1.45
CPNE4-207ENST00000506687 ALDH1A1P00352 501 aa6□□□□□ -1.45
CPNE4-207ENST00000506687 NEFLP07196 543 aa6□□□□□ -1.45
CPNE4-207ENST00000506687 PCSK2P16519 638 aa6□□□□□ -1.45
CPNE4-207ENST00000506687 ZAP70P43403 619 aa6□□□□□ -1.45
CPNE4-207ENST00000506687 GYS2P54840 703 aa6□□□□□ -1.45
CPNE4-207ENST00000506687 TBX4P57082 545 aa6□□□□□ -1.45
CPNE4-207ENST00000506687 FKBP1BP68106 108 aa6□□□□□ -1.45
CPNE4-207ENST00000506687 SREBF2Q12772 1141 aa6□□□□□ -1.45
CPNE4-207ENST00000506687 CBLBQ13191 982 aa6□□□□□ -1.45
CPNE4-207ENST00000506687 RAB33AQ14088 237 aa6□□□□□ -1.45
CPNE4-207ENST00000506687 CCDC57Q2TAC2 916 aa6□□□□□ -1.45
CPNE4-207ENST00000506687 LRIT3Q3SXY7 679 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms