RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 HNRNPLLQ8WVV9 542 aaKnown RBP4.62□□□□□ -1.67
GYPB-207ENST00000506679 PRDM14Q9GZV8 571 aa4.62□□□□□ -1.67
GYPB-207ENST00000506679 KLHL25Q9H0H3 589 aa4.62□□□□□ -1.67
GYPB-207ENST00000506679 TRIT1Q9H3H1 467 aaKnown RBP4.62□□□□□ -1.67
GYPB-207ENST00000506679 ATP13A1Q9HD20 1204 aa4.62□□□□□ -1.67
GYPB-207ENST00000506679 SUSD2Q9UGT4 822 aa4.62□□□□□ -1.67
GYPB-207ENST00000506679 PCDHB10Q9UN67 800 aa4.62□□□□□ -1.67
GYPB-207ENST00000506679 PCDHB12Q9Y5F1 795 aa4.62□□□□□ -1.67
GYPB-207ENST00000506679 KRTAP9-6A0A140TA67 174 aa4.61□□□□□ -1.67
GYPB-207ENST00000506679 WASH4PA8MWX3 477 aa4.61□□□□□ -1.67
GYPB-207ENST00000506679 PRAMEF1O95521 474 aa4.61□□□□□ -1.67
GYPB-207ENST00000506679 CD247P20963 164 aa4.61□□□□□ -1.67
GYPB-207ENST00000506679 CHMP4BP1P59074 171 aa4.61□□□□□ -1.67
GYPB-207ENST00000506679 SLC7A5Q01650 507 aa4.61□□□□□ -1.67
GYPB-207ENST00000506679 RAB33AQ14088 237 aa4.61□□□□□ -1.67
GYPB-207ENST00000506679 GNPTABQ3T906 1256 aa4.61□□□□□ -1.67
GYPB-207ENST00000506679 NBPF6Q5VWK0 638 aa4.61□□□□□ -1.67
GYPB-207ENST00000506679 VHLLQ6RSH7 139 aa4.61□□□□□ -1.67
GYPB-207ENST00000506679 CCDC144CPQ8IYA2 1237 aa4.61□□□□□ -1.67
GYPB-207ENST00000506679 CELF2-AS1Q8N7Q2 184 aa4.61□□□□□ -1.67
GYPB-207ENST00000506679 ZNF513Q8N8E2 541 aaPredicted RBP4.61□□□□□ -1.67
GYPB-207ENST00000506679 MICAL1Q8TDZ2 1067 aa4.61□□□□□ -1.67
GYPB-207ENST00000506679 UBE2FQ969M7 185 aa4.61□□□□□ -1.67
GYPB-207ENST00000506679 NBPF4Q96M43 638 aa4.61□□□□□ -1.67
GYPB-207ENST00000506679 HAUS7Q99871 368 aa4.61□□□□□ -1.67
GYPB-207ENST00000506679 GP6Q9HCN6 339 aa4.61□□□□□ -1.67
GYPB-207ENST00000506679 GPATCH2Q9NW75 528 aa4.61□□□□□ -1.67
GYPB-207ENST00000506679 LMCD1Q9NZU5 365 aa4.61□□□□□ -1.67
GYPB-207ENST00000506679 ANGEL1Q9UNK9 670 aaKnown RBP4.61□□□□□ -1.67
GYPB-207ENST00000506679 B2RBV5 119 aa4.6□□□□□ -1.67
GYPB-207ENST00000506679 STK10O94804 968 aaKnown RBP4.6□□□□□ -1.67
GYPB-207ENST00000506679 TP53P04637 393 aaPredicted RBP4.6□□□□□ -1.67
GYPB-207ENST00000506679 FUT4P22083 530 aa4.6□□□□□ -1.67
GYPB-207ENST00000506679 TPP2P29144 1249 aaPredicted RBP4.6□□□□□ -1.67
GYPB-207ENST00000506679 GP2P55259 537 aaKnown RBP4.6□□□□□ -1.67
GYPB-207ENST00000506679 SERINC3Q13530 473 aa4.6□□□□□ -1.67
GYPB-207ENST00000506679 NCAPHQ15003 741 aa4.6□□□□□ -1.67
GYPB-207ENST00000506679 FXNQ16595 210 aa4.6□□□□□ -1.67
GYPB-207ENST00000506679 ANGEL2Q5VTE6 544 aaKnown RBP4.6□□□□□ -1.67
GYPB-207ENST00000506679 MRM1Q6IN84 353 aaKnown RBP4.6□□□□□ -1.67
GYPB-207ENST00000506679 C6orf15Q6UXA7 325 aaPredicted RBP4.6□□□□□ -1.67
GYPB-207ENST00000506679 FAM178BQ8IXR5 827 aa4.6□□□□□ -1.67
GYPB-207ENST00000506679 ZNF655Q8N720 491 aaPredicted RBP4.6□□□□□ -1.67
GYPB-207ENST00000506679 FLCNQ8NFG4 579 aa4.6□□□□□ -1.67
GYPB-207ENST00000506679 DHX38Q92620 1227 aaKnown RBP4.6□□□□□ -1.67
GYPB-207ENST00000506679 GFOD1Q9NXC2 390 aa4.6□□□□□ -1.67
GYPB-207ENST00000506679 ZSWIM5Q9P217 1185 aa4.6□□□□□ -1.67
GYPB-207ENST00000506679 ZNF281Q9Y2X9 895 aa4.6□□□□□ -1.67
GYPB-207ENST00000506679 MSRB2Q9Y3D2 182 aa4.6□□□□□ -1.67
GYPB-207ENST00000506679 ZNF451Q9Y4E5 1061 aa4.6□□□□□ -1.67
GYPB-207ENST00000506679 A0A087WZG4 1122 aa4.59□□□□□ -1.67
GYPB-207ENST00000506679 EPHX1P07099 455 aa4.59□□□□□ -1.67
GYPB-207ENST00000506679 CTSKP43235 329 aa4.59□□□□□ -1.67
GYPB-207ENST00000506679 ZNF143P52747 638 aaPredicted RBP4.59□□□□□ -1.67
GYPB-207ENST00000506679 ZNF445P59923 1031 aa4.59□□□□□ -1.67
GYPB-207ENST00000506679 IKZF1Q13422 519 aa4.59□□□□□ -1.67
GYPB-207ENST00000506679 DDR2Q16832 855 aa4.59□□□□□ -1.67
GYPB-207ENST00000506679 KIAA1211LQ6NV74 962 aa4.59□□□□□ -1.67
GYPB-207ENST00000506679 CKAP2LQ8IYA6 745 aa4.59□□□□□ -1.67
GYPB-207ENST00000506679 AGBL5Q8NDL9 886 aa4.59□□□□□ -1.67
GYPB-207ENST00000506679 HIRIP3Q9BW71 556 aaPredicted RBP4.59□□□□□ -1.67
GYPB-207ENST00000506679 CHST7Q9NS84 486 aa4.59□□□□□ -1.67
GYPB-207ENST00000506679 DUSP13Q9UII6 198 aa4.59□□□□□ -1.67
GYPB-207ENST00000506679 MINPP1Q9UNW1 487 aa4.59□□□□□ -1.67
GYPB-207ENST00000506679 FHOD1Q9Y613 1164 aa4.59□□□□□ -1.67
GYPB-207ENST00000506679 ANKRD34BA5PLL1 514 aa4.58□□□□□ -1.68
GYPB-207ENST00000506679 GJB6O95452 261 aa4.58□□□□□ -1.68
GYPB-207ENST00000506679 GTF2F1P35269 517 aaKnown RBP eCLIP4.58□□□□□ -1.68
GYPB-207ENST00000506679 TEKQ02763 1124 aa4.58□□□□□ -1.68
GYPB-207ENST00000506679 LARP1BQ659C4 914 aaKnown RBP4.58□□□□□ -1.68
GYPB-207ENST00000506679 HEATR6Q6AI08 1181 aaKnown RBP4.58□□□□□ -1.68
GYPB-207ENST00000506679 SLC23A3Q6PIS1 610 aa4.58□□□□□ -1.68
GYPB-207ENST00000506679 CBLL1Q75N03 491 aa4.58□□□□□ -1.68
GYPB-207ENST00000506679 USHBP1Q8N6Y0 703 aa4.58□□□□□ -1.68
GYPB-207ENST00000506679 LINC00116Q8NCU8 138 aa4.58□□□□□ -1.68
GYPB-207ENST00000506679 TCTN2Q96GX1 697 aa4.58□□□□□ -1.68
GYPB-207ENST00000506679 RCC1LQ96I51 464 aaKnown RBP4.58□□□□□ -1.68
GYPB-207ENST00000506679 DRC1Q96MC2 740 aa4.58□□□□□ -1.68
GYPB-207ENST00000506679 ASCC2Q9H1I8 757 aaPredicted RBP4.58□□□□□ -1.68
GYPB-207ENST00000506679 FAM86C1Q9NVL1 165 aa4.58□□□□□ -1.68
GYPB-207ENST00000506679 WHRNQ9P202 907 aa4.58□□□□□ -1.68
GYPB-207ENST00000506679 ADAMTS6Q9UKP5 1117 aa4.58□□□□□ -1.68
GYPB-207ENST00000506679 FBXL21Q9UKT6 434 aa4.58□□□□□ -1.68
GYPB-207ENST00000506679 OAS3Q9Y6K5 1087 aaKnown RBP4.58□□□□□ -1.68
GYPB-207ENST00000506679 ITGA4P13612 1032 aa4.57□□□□□ -1.68
GYPB-207ENST00000506679 BMP8BP34820 402 aa4.57□□□□□ -1.68
GYPB-207ENST00000506679 ZP2Q05996 745 aa4.57□□□□□ -1.68
GYPB-207ENST00000506679 TCEAL1Q15170 157 aa4.57□□□□□ -1.68
GYPB-207ENST00000506679 CLEC16AQ2KHT3 1053 aa4.57□□□□□ -1.68
GYPB-207ENST00000506679 RNF111Q6ZNA4 994 aa4.57□□□□□ -1.68
GYPB-207ENST00000506679 CREG2Q8IUH2 290 aa4.57□□□□□ -1.68
GYPB-207ENST00000506679 ABI1Q8IZP0 508 aa4.57□□□□□ -1.68
GYPB-207ENST00000506679 ARHGEF39Q8N4T4 335 aa4.57□□□□□ -1.68
GYPB-207ENST00000506679 UBXN4Q92575 508 aa4.57□□□□□ -1.68
GYPB-207ENST00000506679 CARS2Q9HA77 564 aaKnown RBP4.57□□□□□ -1.68
GYPB-207ENST00000506679 MBNL3Q9NUK0 354 aaKnown RBP4.57□□□□□ -1.68
GYPB-207ENST00000506679 APEX2Q9UBZ4 518 aa4.57□□□□□ -1.68
GYPB-207ENST00000506679 PCDHA11Q9Y5I1 949 aa4.57□□□□□ -1.68
GYPB-207ENST00000506679 SUSD5O60279 629 aa4.56□□□□□ -1.68
GYPB-207ENST00000506679 DDAH1O94760 285 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms