RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 RAD21O60216 631 aa15.54■□□□□ 0.08
TCOF1-209ENST00000506630 MAGEA10P43363 369 aaPredicted RBP15.54■□□□□ 0.08
TCOF1-209ENST00000506630 FAM47AQ5JRC9 791 aa15.54■□□□□ 0.08
TCOF1-209ENST00000506630 TDHQ8IZJ6 230 aa15.54■□□□□ 0.08
TCOF1-209ENST00000506630 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.54■□□□□ 0.08
TCOF1-209ENST00000506630 UBE2OQ9C0C9 1292 aaKnown RBP15.54■□□□□ 0.08
TCOF1-209ENST00000506630 IL25Q9H293 177 aa15.54■□□□□ 0.08
TCOF1-209ENST00000506630 RPAP3Q9H6T3 665 aaPredicted RBP15.54■□□□□ 0.08
TCOF1-209ENST00000506630 TXNRD2Q9NNW7 524 aa15.54■□□□□ 0.08
TCOF1-209ENST00000506630 INCENPQ9NQS7 918 aa15.54■□□□□ 0.08
TCOF1-209ENST00000506630 TOMM22Q9NS69 142 aa15.54■□□□□ 0.08
TCOF1-209ENST00000506630 ANAPC4Q9UJX5 808 aa15.54■□□□□ 0.08
TCOF1-209ENST00000506630 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.54■□□□□ 0.08
TCOF1-209ENST00000506630 TMX2Q9Y320 296 aa15.54■□□□□ 0.08
TCOF1-209ENST00000506630 TSPY2A6NKD2 308 aa15.53■□□□□ 0.08
TCOF1-209ENST00000506630 USP17L15C9J2P7 530 aa15.53■□□□□ 0.08
TCOF1-209ENST00000506630 USP17L13C9JLJ4 530 aa15.53■□□□□ 0.08
TCOF1-209ENST00000506630 USP17L11C9JVI0 530 aa15.53■□□□□ 0.08
TCOF1-209ENST00000506630 USP17L18D6R9N7 530 aa15.53■□□□□ 0.08
TCOF1-209ENST00000506630 USP17L22D6RA61 530 aa15.53■□□□□ 0.08
TCOF1-209ENST00000506630 USP17L17D6RBQ6 530 aa15.53■□□□□ 0.08
TCOF1-209ENST00000506630 USP17L19D6RCP7 530 aa15.53■□□□□ 0.08
TCOF1-209ENST00000506630 USP17L20D6RJB6 530 aa15.53■□□□□ 0.08
TCOF1-209ENST00000506630 HERVK_113P62684 666 aa15.53■□□□□ 0.08
TCOF1-209ENST00000506630 TFAP4Q01664 338 aa15.53■□□□□ 0.08
TCOF1-209ENST00000506630 USP17L24Q0WX57 530 aa15.53■□□□□ 0.08
TCOF1-209ENST00000506630 Q3C1V9 767 aa15.53■□□□□ 0.08
TCOF1-209ENST00000506630 RRP12Q5JTH9 1297 aaKnown RBP15.53■□□□□ 0.08
TCOF1-209ENST00000506630 Q7L0L9 218 aa15.53■□□□□ 0.08
TCOF1-209ENST00000506630 SIAH1Q8IUQ4 282 aa15.53■□□□□ 0.08
TCOF1-209ENST00000506630 SPICE1Q8N0Z3 855 aa15.53■□□□□ 0.08
TCOF1-209ENST00000506630 DSCC1Q9BVC3 393 aa15.53■□□□□ 0.08
TCOF1-209ENST00000506630 TANGO6Q9C0B7 1094 aa15.53■□□□□ 0.08
TCOF1-209ENST00000506630 VCPKMTQ9H867 229 aa15.53■□□□□ 0.08
TCOF1-209ENST00000506630 OGDHLQ9ULD0 1010 aa15.53■□□□□ 0.08
TCOF1-209ENST00000506630 IGKV6D-41A0A0C4DH26 115 aa15.52■□□□□ 0.08
TCOF1-209ENST00000506630 RANBP6O60518 1105 aaKnown RBP15.52■□□□□ 0.08
TCOF1-209ENST00000506630 CYP2B6P20813 491 aa15.52■□□□□ 0.08
TCOF1-209ENST00000506630 TRIM32Q13049 653 aa15.52■□□□□ 0.08
TCOF1-209ENST00000506630 CATSPERGQ6ZRH7 1159 aa15.52■□□□□ 0.08
TCOF1-209ENST00000506630 NEDD1Q8NHV4 660 aa15.52■□□□□ 0.08
TCOF1-209ENST00000506630 CEP95Q96GE4 821 aa15.52■□□□□ 0.08
TCOF1-209ENST00000506630 GOPCQ9HD26 462 aa15.52■□□□□ 0.08
TCOF1-209ENST00000506630 MTMR10Q9NXD2 777 aa15.52■□□□□ 0.08
TCOF1-209ENST00000506630 PPP4R2Q9NY27 417 aa15.52■□□□□ 0.08
TCOF1-209ENST00000506630 TACC3Q9Y6A5 838 aa15.52■□□□□ 0.08
TCOF1-209ENST00000506630 ZNF213O14771 459 aa15.51■□□□□ 0.07
TCOF1-209ENST00000506630 ORC4O43929 436 aa15.51■□□□□ 0.07
TCOF1-209ENST00000506630 BMP2KLQ5H9B9 411 aa15.51■□□□□ 0.07
TCOF1-209ENST00000506630 KIAA1755Q5JYT7 1200 aa15.51■□□□□ 0.07
TCOF1-209ENST00000506630 ERICH6BQ5W0A0 696 aa15.51■□□□□ 0.07
TCOF1-209ENST00000506630 TBC1D10CQ8IV04 446 aa15.51■□□□□ 0.07
TCOF1-209ENST00000506630 TRMT44Q8IYL2 757 aaKnown RBP15.51■□□□□ 0.07
TCOF1-209ENST00000506630 GTF3C2Q8WUA4 911 aaPredicted RBP15.51■□□□□ 0.07
TCOF1-209ENST00000506630 STAG1Q8WVM7 1258 aa15.51■□□□□ 0.07
TCOF1-209ENST00000506630 TRIB2Q92519 343 aa15.51■□□□□ 0.07
TCOF1-209ENST00000506630 LPAR1Q92633 364 aa15.51■□□□□ 0.07
TCOF1-209ENST00000506630 NUDT12Q9BQG2 462 aa15.51■□□□□ 0.07
TCOF1-209ENST00000506630 PAGR1Q9BTK6 254 aa15.51■□□□□ 0.07
TCOF1-209ENST00000506630 NYAP2Q9P242 653 aa15.51■□□□□ 0.07
TCOF1-209ENST00000506630 RBPJLQ9UBG7 517 aa15.51■□□□□ 0.07
TCOF1-209ENST00000506630 MORF4L1Q9UBU8 362 aa15.51■□□□□ 0.07
TCOF1-209ENST00000506630 CLIP2Q9UDT6 1046 aa15.51■□□□□ 0.07
TCOF1-209ENST00000506630 ZNFX1Q9P2E3 1918 aaKnown RBP15.51■□□□□ 0.07
TCOF1-209ENST00000506630 WDR46O15213 610 aaKnown RBP15.5■□□□□ 0.07
TCOF1-209ENST00000506630 SGSM2O43147 1006 aa15.5■□□□□ 0.07
TCOF1-209ENST00000506630 TTLL1O95922 423 aa15.5■□□□□ 0.07
TCOF1-209ENST00000506630 XRCC5P13010 732 aaKnown RBP15.5■□□□□ 0.07
TCOF1-209ENST00000506630 PRKAR2AP13861 404 aaKnown RBP15.5■□□□□ 0.07
TCOF1-209ENST00000506630 AKNAD1Q5T1N1 836 aa15.5■□□□□ 0.07
TCOF1-209ENST00000506630 MFSD6Q6ZSS7 791 aa15.5■□□□□ 0.07
TCOF1-209ENST00000506630 CCAR1Q8IX12 1150 aaKnown RBP15.5■□□□□ 0.07
TCOF1-209ENST00000506630 LRRC47Q8N1G4 583 aaKnown RBP15.5■□□□□ 0.07
TCOF1-209ENST00000506630 SOCS4Q8WXH5 440 aa15.5■□□□□ 0.07
TCOF1-209ENST00000506630 RNF41Q9H4P4 317 aaPredicted RBP15.5■□□□□ 0.07
TCOF1-209ENST00000506630 MTMR4Q9NYA4 1195 aa15.5■□□□□ 0.07
TCOF1-209ENST00000506630 CTNNA3Q9UI47 895 aa15.5■□□□□ 0.07
TCOF1-209ENST00000506630 CNMDO75829 334 aa15.49■□□□□ 0.07
TCOF1-209ENST00000506630 FLOT1O75955 427 aa15.49■□□□□ 0.07
TCOF1-209ENST00000506630 FGRP09769 529 aa15.49■□□□□ 0.07
TCOF1-209ENST00000506630 IMMTQ16891 758 aaKnown RBP15.49■□□□□ 0.07
TCOF1-209ENST00000506630 MAP3K21Q5TCX8 1036 aa15.49■□□□□ 0.07
TCOF1-209ENST00000506630 SAMD1Q6SPF0 538 aaPredicted RBP15.49■□□□□ 0.07
TCOF1-209ENST00000506630 GPRC5AQ8NFJ5 357 aa15.49■□□□□ 0.07
TCOF1-209ENST00000506630 PORCNQ9H237 461 aa15.49■□□□□ 0.07
TCOF1-209ENST00000506630 STX8Q9UNK0 236 aa15.49■□□□□ 0.07
TCOF1-209ENST00000506630 NEDD4P46934 1319 aa15.48■□□□□ 0.07
TCOF1-209ENST00000506630 SPDYE16A6NNV3 312 aaPredicted RBP15.48■□□□□ 0.07
TCOF1-209ENST00000506630 NMT2O60551 498 aa15.48■□□□□ 0.07
TCOF1-209ENST00000506630 PCP11498 1178 aaKnown RBP15.48■□□□□ 0.07
TCOF1-209ENST00000506630 ZKSCAN1P17029 563 aaPredicted RBP15.48■□□□□ 0.07
TCOF1-209ENST00000506630 MAPK4P31152 587 aa15.48■□□□□ 0.07
TCOF1-209ENST00000506630 ERVK-9P63128 1117 aa15.48■□□□□ 0.07
TCOF1-209ENST00000506630 ERVK-24P63145 666 aa15.48■□□□□ 0.07
TCOF1-209ENST00000506630 PPP4R3BQ5MIZ7 849 aa15.48■□□□□ 0.07
TCOF1-209ENST00000506630 FAM83BQ5T0W9 1011 aa15.48■□□□□ 0.07
TCOF1-209ENST00000506630 PFASO15067 1338 aa15.47■□□□□ 0.07
TCOF1-209ENST00000506630 MYH6P13533 1939 aa15.47■□□□□ 0.07
TCOF1-209ENST00000506630 ALPK3Q96L96 1907 aa15.47■□□□□ 0.07
TCOF1-209ENST00000506630 NDUFB10O96000 172 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms