RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 PRKCZQ05513 592 aa19.66■□□□□ 0.74
SNCA-209ENST00000506244 SLFN13Q68D06 897 aa19.66■□□□□ 0.74
SNCA-209ENST00000506244 NBPF11Q86T75 865 aa19.66■□□□□ 0.74
SNCA-209ENST00000506244 MAP4K1Q92918 833 aa19.66■□□□□ 0.74
SNCA-209ENST00000506244 GMCL1Q96IK5 515 aa19.66■□□□□ 0.74
SNCA-209ENST00000506244 SLF1Q9BQI6 1058 aa19.66■□□□□ 0.74
SNCA-209ENST00000506244 PPP1R9AQ9ULJ8 1098 aa19.66■□□□□ 0.74
SNCA-209ENST00000506244 RLFQ13129 1914 aa19.66■□□□□ 0.74
SNCA-209ENST00000506244 CCDC85CA6NKD9 419 aa19.65■□□□□ 0.74
SNCA-209ENST00000506244 NMT2O60551 498 aa19.65■□□□□ 0.74
SNCA-209ENST00000506244 KDM4AO75164 1064 aa19.65■□□□□ 0.74
SNCA-209ENST00000506244 BMP3P12645 472 aa19.65■□□□□ 0.74
SNCA-209ENST00000506244 SLC1A4P43007 532 aa19.65■□□□□ 0.74
SNCA-209ENST00000506244 SLAIN1Q8ND83 568 aa19.65■□□□□ 0.74
SNCA-209ENST00000506244 ATG4CQ96DT6 458 aa19.65■□□□□ 0.74
SNCA-209ENST00000506244 TTC14Q96N46 770 aa19.65■□□□□ 0.74
SNCA-209ENST00000506244 ANO2Q9NQ90 1003 aa19.65■□□□□ 0.74
SNCA-209ENST00000506244 FEM1BQ9UK73 627 aa19.65■□□□□ 0.74
SNCA-209ENST00000506244 ISY1Q9ULR0 285 aaKnown RBP19.65■□□□□ 0.74
SNCA-209ENST00000506244 B4E1Z4 1266 aa19.64■□□□□ 0.73
SNCA-209ENST00000506244 CNMDO75829 334 aa19.64■□□□□ 0.73
SNCA-209ENST00000506244 IRF5Q13568 498 aa19.64■□□□□ 0.73
SNCA-209ENST00000506244 SAMD1Q6SPF0 538 aaPredicted RBP19.64■□□□□ 0.73
SNCA-209ENST00000506244 RALYLQ86SE5 291 aaKnown RBP19.64■□□□□ 0.73
SNCA-209ENST00000506244 ARMC5Q96C12 935 aa19.64■□□□□ 0.73
SNCA-209ENST00000506244 NUP88Q99567 741 aaPredicted RBP19.64■□□□□ 0.73
SNCA-209ENST00000506244 UBAC1Q9BSL1 405 aa19.64■□□□□ 0.73
SNCA-209ENST00000506244 BTBD7Q9P203 1132 aa19.64■□□□□ 0.73
SNCA-209ENST00000506244 RBM8AQ9Y5S9 174 aaKnown RBP19.64■□□□□ 0.73
SNCA-209ENST00000506244 IVNS1ABPQ9Y6Y0 642 aa19.64■□□□□ 0.73
SNCA-209ENST00000506244 CAPN15O75808 1086 aa19.63■□□□□ 0.73
SNCA-209ENST00000506244 CYP21A2P08686 494 aa19.63■□□□□ 0.73
SNCA-209ENST00000506244 COPB2P35606 906 aa19.63■□□□□ 0.73
SNCA-209ENST00000506244 FLT3LGP49771 235 aa19.63■□□□□ 0.73
SNCA-209ENST00000506244 STAT2P52630 851 aa19.63■□□□□ 0.73
SNCA-209ENST00000506244 FAM160B2Q86V87 743 aa19.63■□□□□ 0.73
SNCA-209ENST00000506244 DGKHQ86XP1 1220 aa19.63■□□□□ 0.73
SNCA-209ENST00000506244 PRPF38AQ8NAV1 312 aaKnown RBP19.63■□□□□ 0.73
SNCA-209ENST00000506244 SHCBP1Q8NEM2 672 aa19.63■□□□□ 0.73
SNCA-209ENST00000506244 DCAF4Q8WV16 495 aa19.63■□□□□ 0.73
SNCA-209ENST00000506244 LSG1Q9H089 658 aaKnown RBP19.63■□□□□ 0.73
SNCA-209ENST00000506244 SPATC1LQ9H0A9 340 aa19.63■□□□□ 0.73
SNCA-209ENST00000506244 PORCNQ9H237 461 aa19.63■□□□□ 0.73
SNCA-209ENST00000506244 FBXO28Q9NVF7 368 aa19.63■□□□□ 0.73
SNCA-209ENST00000506244 CTDP1Q9Y5B0 961 aaPredicted RBP19.63■□□□□ 0.73
SNCA-209ENST00000506244 FDX1P10109 184 aa19.62■□□□□ 0.73
SNCA-209ENST00000506244 GRK4P32298 578 aa19.62■□□□□ 0.73
SNCA-209ENST00000506244 IKQ13123 557 aaPredicted RBP19.62■□□□□ 0.73
SNCA-209ENST00000506244 PLS1Q14651 629 aa19.62■□□□□ 0.73
SNCA-209ENST00000506244 Q3C1V9 767 aa19.62■□□□□ 0.73
SNCA-209ENST00000506244 WDR78Q5VTH9 848 aa19.62■□□□□ 0.73
SNCA-209ENST00000506244 POTEEQ6S8J3 1075 aa19.62■□□□□ 0.73
SNCA-209ENST00000506244 GPR142Q7Z601 462 aa19.62■□□□□ 0.73
SNCA-209ENST00000506244 PLEKHH3Q7Z736 793 aa19.62■□□□□ 0.73
SNCA-209ENST00000506244 CHURC1Q8WUH1 139 aa19.62■□□□□ 0.73
SNCA-209ENST00000506244 ZSCAN10Q96SZ4 725 aaPredicted RBP19.62■□□□□ 0.73
SNCA-209ENST00000506244 NUDT12Q9BQG2 462 aa19.62■□□□□ 0.73
SNCA-209ENST00000506244 TMEM47Q9BQJ4 181 aa19.62■□□□□ 0.73
SNCA-209ENST00000506244 ADAMTS5Q9UNA0 930 aa19.62■□□□□ 0.73
SNCA-209ENST00000506244 VWA5AO00534 786 aa19.61■□□□□ 0.73
SNCA-209ENST00000506244 PEX10O60683 326 aa19.61■□□□□ 0.73
SNCA-209ENST00000506244 CCDC96Q2M329 555 aa19.61■□□□□ 0.73
SNCA-209ENST00000506244 RNF20Q5VTR2 975 aa19.61■□□□□ 0.73
SNCA-209ENST00000506244 NCOA7Q8NI08 942 aa19.61■□□□□ 0.73
SNCA-209ENST00000506244 PXYLP1Q8TE99 480 aa19.61■□□□□ 0.73
SNCA-209ENST00000506244 MROH8Q9H579 483 aa19.61■□□□□ 0.73
SNCA-209ENST00000506244 GABRQQ9UN88 632 aa19.61■□□□□ 0.73
SNCA-209ENST00000506244 HTTP42858 3142 aa19.6■□□□□ 0.73
SNCA-209ENST00000506244 TNKSO95271 1327 aa19.6■□□□□ 0.73
SNCA-209ENST00000506244 TMEM232C9JQI7 657 aa19.6■□□□□ 0.73
SNCA-209ENST00000506244 ADCY3O60266 1144 aa19.6■□□□□ 0.73
SNCA-209ENST00000506244 PLA2G6O60733 806 aa19.6■□□□□ 0.73
SNCA-209ENST00000506244 ZBED4O75132 1171 aa19.6■□□□□ 0.73
SNCA-209ENST00000506244 SLC25A27O95847 323 aa19.6■□□□□ 0.73
SNCA-209ENST00000506244 MCCP23508 829 aa19.6■□□□□ 0.73
SNCA-209ENST00000506244 RGS2P41220 211 aa19.6■□□□□ 0.73
SNCA-209ENST00000506244 SART3Q15020 963 aaKnown RBP19.6■□□□□ 0.73
SNCA-209ENST00000506244 RCSD1Q6JBY9 416 aa19.6■□□□□ 0.73
SNCA-209ENST00000506244 KIFC2Q96AC6 838 aa19.6■□□□□ 0.73
SNCA-209ENST00000506244 ZNF333Q96JL9 665 aa19.6■□□□□ 0.73
SNCA-209ENST00000506244 MOV10L1Q9BXT6 1211 aaKnown RBP19.6■□□□□ 0.73
SNCA-209ENST00000506244 KAT14Q9H8E8 782 aa19.6■□□□□ 0.73
SNCA-209ENST00000506244 ZSWIM5Q9P217 1185 aa19.6■□□□□ 0.73
SNCA-209ENST00000506244 COL11A1P12107 1806 aaPredicted RBP19.6■□□□□ 0.73
SNCA-209ENST00000506244 ZNF236Q9UL36 1845 aa19.6■□□□□ 0.73
SNCA-209ENST00000506244 ERICH2A1L162 156 aa19.59■□□□□ 0.73
SNCA-209ENST00000506244 E7EWF7 191 aa19.59■□□□□ 0.73
SNCA-209ENST00000506244 UBXN2AP68543 259 aa19.59■□□□□ 0.73
SNCA-209ENST00000506244 TMEM132BQ14DG7 1078 aa19.59■□□□□ 0.73
SNCA-209ENST00000506244 TRMT44Q8IYL2 757 aaKnown RBP19.59■□□□□ 0.73
SNCA-209ENST00000506244 APBA2Q99767 749 aa19.59■□□□□ 0.73
SNCA-209ENST00000506244 ZKSCAN3Q9BRR0 538 aa19.59■□□□□ 0.73
SNCA-209ENST00000506244 TEX13BQ9BXU2 312 aa19.59■□□□□ 0.73
SNCA-209ENST00000506244 BIN2Q9UBW5 565 aaPredicted RBP19.59■□□□□ 0.73
SNCA-209ENST00000506244 MTMR7Q9Y216 660 aa19.59■□□□□ 0.73
SNCA-209ENST00000506244 SLC15A5A6NIM6 579 aa19.58■□□□□ 0.72
SNCA-209ENST00000506244 STRNO43815 780 aa19.58■□□□□ 0.72
SNCA-209ENST00000506244 ERCC3P19447 782 aa19.58■□□□□ 0.72
SNCA-209ENST00000506244 OAZ1P54368 228 aa19.58■□□□□ 0.72
SNCA-209ENST00000506244 NCAPG2Q86XI2 1143 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms