RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 MRM1Q6IN84 353 aaKnown RBP6.24□□□□□ -1.41
TOPBP1-204ENST00000505804 ADAT2Q7Z6V5 191 aaKnown RBP6.24□□□□□ -1.41
TOPBP1-204ENST00000505804 HRASLS5Q96KN8 279 aa6.24□□□□□ -1.41
TOPBP1-204ENST00000505804 FGD4Q96M96 766 aa6.24□□□□□ -1.41
TOPBP1-204ENST00000505804 GPR62Q9BZJ7 368 aa6.24□□□□□ -1.41
TOPBP1-204ENST00000505804 ASCC2Q9H1I8 757 aaPredicted RBP6.24□□□□□ -1.41
TOPBP1-204ENST00000505804 GP6Q9HCN6 339 aa6.24□□□□□ -1.41
TOPBP1-204ENST00000505804 SEMA3GQ9NS98 782 aa6.24□□□□□ -1.41
TOPBP1-204ENST00000505804 BSDC1Q9NW68 430 aaPredicted RBP6.24□□□□□ -1.41
TOPBP1-204ENST00000505804 GFOD1Q9NXC2 390 aa6.24□□□□□ -1.41
TOPBP1-204ENST00000505804 MINPP1Q9UNW1 487 aa6.24□□□□□ -1.41
TOPBP1-204ENST00000505804 CCDC85CA6NKD9 419 aa6.23□□□□□ -1.41
TOPBP1-204ENST00000505804 EPHX1P07099 455 aa6.23□□□□□ -1.41
TOPBP1-204ENST00000505804 TPP2P29144 1249 aaPredicted RBP6.23□□□□□ -1.41
TOPBP1-204ENST00000505804 CD96P40200 585 aa6.23□□□□□ -1.41
TOPBP1-204ENST00000505804 PRKCQQ04759 706 aa6.23□□□□□ -1.41
TOPBP1-204ENST00000505804 NMIQ13287 307 aaPredicted RBP6.23□□□□□ -1.41
TOPBP1-204ENST00000505804 SERINC3Q13530 473 aa6.23□□□□□ -1.41
TOPBP1-204ENST00000505804 TCEAL1Q15170 157 aa6.23□□□□□ -1.41
TOPBP1-204ENST00000505804 CLEC16AQ2KHT3 1053 aa6.23□□□□□ -1.41
TOPBP1-204ENST00000505804 NOL9Q5SY16 702 aaKnown RBP6.23□□□□□ -1.41
TOPBP1-204ENST00000505804 DTX1Q86Y01 620 aa6.23□□□□□ -1.41
TOPBP1-204ENST00000505804 BRF1Q92994 677 aa6.23□□□□□ -1.41
TOPBP1-204ENST00000505804 LNPKQ9C0E8 428 aa6.23□□□□□ -1.41
TOPBP1-204ENST00000505804 ATP13A1Q9HD20 1204 aa6.23□□□□□ -1.41
TOPBP1-204ENST00000505804 GPATCH2Q9NW75 528 aa6.23□□□□□ -1.41
TOPBP1-204ENST00000505804 SIRPGQ9P1W8 387 aa6.23□□□□□ -1.41
TOPBP1-204ENST00000505804 SUSD2Q9UGT4 822 aa6.23□□□□□ -1.41
TOPBP1-204ENST00000505804 VAV3Q9UKW4 847 aa6.23□□□□□ -1.41
TOPBP1-204ENST00000505804 PITPNM2Q9BZ72 1349 aa6.23□□□□□ -1.41
TOPBP1-204ENST00000505804 MEIS1O00470 390 aa6.22□□□□□ -1.41
TOPBP1-204ENST00000505804 PRAMEF1O95521 474 aa6.22□□□□□ -1.41
TOPBP1-204ENST00000505804 ZNF445P59923 1031 aa6.22□□□□□ -1.41
TOPBP1-204ENST00000505804 SPRED2Q7Z698 418 aa6.22□□□□□ -1.41
TOPBP1-204ENST00000505804 TSPYL5Q86VY4 417 aaPredicted RBP6.22□□□□□ -1.41
TOPBP1-204ENST00000505804 BCL7CQ8WUZ0 217 aaPredicted RBP6.22□□□□□ -1.41
TOPBP1-204ENST00000505804 ASB11Q8WXH4 323 aa6.22□□□□□ -1.41
TOPBP1-204ENST00000505804 APBA2Q99767 749 aa6.22□□□□□ -1.41
TOPBP1-204ENST00000505804 KLHL25Q9H0H3 589 aa6.22□□□□□ -1.41
TOPBP1-204ENST00000505804 TRIT1Q9H3H1 467 aaKnown RBP6.22□□□□□ -1.41
TOPBP1-204ENST00000505804 ANKRD34BA5PLL1 514 aa6.21□□□□□ -1.42
TOPBP1-204ENST00000505804 KIAA1324LA8MWY0 1029 aaPredicted RBP6.21□□□□□ -1.42
TOPBP1-204ENST00000505804 SIGLEC6O43699 453 aa6.21□□□□□ -1.42
TOPBP1-204ENST00000505804 ITGA4P13612 1032 aa6.21□□□□□ -1.42
TOPBP1-204ENST00000505804 SPINK2P20155 84 aa6.21□□□□□ -1.42
TOPBP1-204ENST00000505804 CCDC144BQ3MJ40 725 aa6.21□□□□□ -1.42
TOPBP1-204ENST00000505804 DPH6Q7L8W6 267 aa6.21□□□□□ -1.42
TOPBP1-204ENST00000505804 THAP5Q7Z6K1 395 aa6.21□□□□□ -1.42
TOPBP1-204ENST00000505804 ADCY4Q8NFM4 1077 aa6.21□□□□□ -1.42
TOPBP1-204ENST00000505804 ENOX1Q8TC92 643 aaKnown RBP6.21□□□□□ -1.42
TOPBP1-204ENST00000505804 MISP3Q96FF7 219 aa6.21□□□□□ -1.42
TOPBP1-204ENST00000505804 CHST7Q9NS84 486 aa6.21□□□□□ -1.42
TOPBP1-204ENST00000505804 PCMTD2Q9NV79 361 aa6.21□□□□□ -1.42
TOPBP1-204ENST00000505804 CCDC39Q9UFE4 941 aa6.21□□□□□ -1.42
TOPBP1-204ENST00000505804 SLC5A6Q9Y289 635 aa6.21□□□□□ -1.42
TOPBP1-204ENST00000505804 SUSD5O60279 629 aa6.2□□□□□ -1.42
TOPBP1-204ENST00000505804 ADAMTS4O75173 837 aa6.2□□□□□ -1.42
TOPBP1-204ENST00000505804 PPM1BO75688 479 aa6.2□□□□□ -1.42
TOPBP1-204ENST00000505804 PRNPP04156 253 aa6.2□□□□□ -1.42
TOPBP1-204ENST00000505804 CD8BP10966 210 aa6.2□□□□□ -1.42
TOPBP1-204ENST00000505804 ZNF574Q6ZN55 896 aaPredicted RBP6.2□□□□□ -1.42
TOPBP1-204ENST00000505804 EEPD1Q7L9B9 569 aa6.2□□□□□ -1.42
TOPBP1-204ENST00000505804 USHBP1Q8N6Y0 703 aa6.2□□□□□ -1.42
TOPBP1-204ENST00000505804 DAGLBQ8NCG7 672 aa6.2□□□□□ -1.42
TOPBP1-204ENST00000505804 SYTL5Q8TDW5 730 aaPredicted RBP6.2□□□□□ -1.42
TOPBP1-204ENST00000505804 TCTN2Q96GX1 697 aa6.2□□□□□ -1.42
TOPBP1-204ENST00000505804 DSCC1Q9BVC3 393 aa6.2□□□□□ -1.42
TOPBP1-204ENST00000505804 HDAC8Q9BY41 377 aa6.2□□□□□ -1.42
TOPBP1-204ENST00000505804 CCDC113Q9H0I3 377 aa6.2□□□□□ -1.42
TOPBP1-204ENST00000505804 GBP3Q9H0R5 595 aa6.2□□□□□ -1.42
TOPBP1-204ENST00000505804 OSBPL2Q9H1P3 480 aa6.2□□□□□ -1.42
TOPBP1-204ENST00000505804 NOL6Q9H6R4 1146 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-204ENST00000505804 WHRNQ9P202 907 aa6.2□□□□□ -1.42
TOPBP1-204ENST00000505804 APEX2Q9UBZ4 518 aa6.2□□□□□ -1.42
TOPBP1-204ENST00000505804 SUGT1Q9Y2Z0 365 aa6.2□□□□□ -1.42
TOPBP1-204ENST00000505804 MSRB2Q9Y3D2 182 aa6.2□□□□□ -1.42
TOPBP1-204ENST00000505804 A0A087WZG4 1122 aa6.19□□□□□ -1.42
TOPBP1-204ENST00000505804 FAM221BA6H8Z2 402 aa6.19□□□□□ -1.42
TOPBP1-204ENST00000505804 PDPK1O15530 556 aa6.19□□□□□ -1.42
TOPBP1-204ENST00000505804 HYAL3O43820 417 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-204ENST00000505804 CTSKP43235 329 aa6.19□□□□□ -1.42
TOPBP1-204ENST00000505804 ZNF143P52747 638 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-204ENST00000505804 IKZF1Q13422 519 aa6.19□□□□□ -1.42
TOPBP1-204ENST00000505804 PPP2R5DQ14738 602 aa6.19□□□□□ -1.42
TOPBP1-204ENST00000505804 GAB4Q2WGN9 574 aa6.19□□□□□ -1.42
TOPBP1-204ENST00000505804 SV2CQ496J9 727 aa6.19□□□□□ -1.42
TOPBP1-204ENST00000505804 CREG2Q8IUH2 290 aa6.19□□□□□ -1.42
TOPBP1-204ENST00000505804 STK11IPQ8N1F8 1099 aa6.19□□□□□ -1.42
TOPBP1-204ENST00000505804 FIBCD1Q8N539 461 aa6.19□□□□□ -1.42
TOPBP1-204ENST00000505804 ZNF655Q8N720 491 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-204ENST00000505804 ZNF513Q8N8E2 541 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-204ENST00000505804 PPP1R14AQ96A00 147 aa6.19□□□□□ -1.42
TOPBP1-204ENST00000505804 SRPK1Q96SB4 655 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-204ENST00000505804 LGR4Q9BXB1 951 aa6.19□□□□□ -1.42
TOPBP1-204ENST00000505804 ZSWIM4Q9H7M6 989 aa6.19□□□□□ -1.42
TOPBP1-204ENST00000505804 PRR13Q9NZ81 148 aa6.19□□□□□ -1.42
TOPBP1-204ENST00000505804 DUSP13Q9UII6 198 aa6.19□□□□□ -1.42
TOPBP1-204ENST00000505804 FHOD1Q9Y613 1164 aa6.19□□□□□ -1.42
TOPBP1-204ENST00000505804 SCO2A0A1W2PP80 73 aa6.18□□□□□ -1.42
TOPBP1-204ENST00000505804 ESR1P03372 595 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms