RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 TACC3Q9Y6A5 838 aa13.5□□□□□ -0.25
KDM3B-203ENST00000505756 RLFQ13129 1914 aa13.49□□□□□ -0.25
KDM3B-203ENST00000505756 MLLT1Q03111 559 aaPredicted RBP13.49□□□□□ -0.25
KDM3B-203ENST00000505756 RRP12Q5JTH9 1297 aaKnown RBP13.49□□□□□ -0.25
KDM3B-203ENST00000505756 MFSD6Q6ZSS7 791 aa13.49□□□□□ -0.25
KDM3B-203ENST00000505756 PLEKHH3Q7Z736 793 aa13.49□□□□□ -0.25
KDM3B-203ENST00000505756 LRRC47Q8N1G4 583 aaKnown RBP13.49□□□□□ -0.25
KDM3B-203ENST00000505756 ATG4CQ96DT6 458 aa13.49□□□□□ -0.25
KDM3B-203ENST00000505756 NUDT12Q9BQG2 462 aa13.49□□□□□ -0.25
KDM3B-203ENST00000505756 NBPF3Q9H094 633 aa13.49□□□□□ -0.25
KDM3B-203ENST00000505756 IL25Q9H293 177 aa13.49□□□□□ -0.25
KDM3B-203ENST00000505756 IL17RBQ9NRM6 502 aa13.49□□□□□ -0.25
KDM3B-203ENST00000505756 BIN2Q9UBW5 565 aaPredicted RBP13.49□□□□□ -0.25
KDM3B-203ENST00000505756 CTNNA3Q9UI47 895 aa13.49□□□□□ -0.25
KDM3B-203ENST00000505756 PPP1R9AQ9ULJ8 1098 aa13.49□□□□□ -0.25
KDM3B-203ENST00000505756 ADAMTS5Q9UNA0 930 aa13.49□□□□□ -0.25
KDM3B-203ENST00000505756 STX8Q9UNK0 236 aa13.49□□□□□ -0.25
KDM3B-203ENST00000505756 RBBP6Q7Z6E9 1792 aaKnown RBP13.49□□□□□ -0.25
KDM3B-203ENST00000505756 ELNP15502 786 aa13.48□□□□□ -0.25
KDM3B-203ENST00000505756 NOVP48745 357 aa13.48□□□□□ -0.25
KDM3B-203ENST00000505756 IMMTQ16891 758 aaKnown RBP13.48□□□□□ -0.25
KDM3B-203ENST00000505756 TBC1D10CQ8IV04 446 aa13.48□□□□□ -0.25
KDM3B-203ENST00000505756 SHCBP1Q8NEM2 672 aa13.48□□□□□ -0.25
KDM3B-203ENST00000505756 NUP88Q99567 741 aaPredicted RBP13.48□□□□□ -0.25
KDM3B-203ENST00000505756 MOV10L1Q9BXT6 1211 aaKnown RBP13.48□□□□□ -0.25
KDM3B-203ENST00000505756 SPATC1LQ9H0A9 340 aa13.48□□□□□ -0.25
KDM3B-203ENST00000505756 TCP11L1Q9NUJ3 509 aa13.48□□□□□ -0.25
KDM3B-203ENST00000505756 FBXO28Q9NVF7 368 aa13.48□□□□□ -0.25
KDM3B-203ENST00000505756 MYH4Q9Y623 1939 aa13.48□□□□□ -0.25
KDM3B-203ENST00000505756 LAMA4Q16363 1823 aa13.48□□□□□ -0.25
KDM3B-203ENST00000505756 PARP14Q460N5 1801 aa13.48□□□□□ -0.25
KDM3B-203ENST00000505756 POTEFA5A3E0 1075 aa13.47□□□□□ -0.25
KDM3B-203ENST00000505756 VWA5AO00534 786 aa13.47□□□□□ -0.25
KDM3B-203ENST00000505756 NMT2O60551 498 aa13.47□□□□□ -0.25
KDM3B-203ENST00000505756 MYCP01106 439 aaPredicted RBP13.47□□□□□ -0.25
KDM3B-203ENST00000505756 INHAP05111 366 aa13.47□□□□□ -0.25
KDM3B-203ENST00000505756 XRCC5P13010 732 aaKnown RBP13.47□□□□□ -0.25
KDM3B-203ENST00000505756 RGS2P41220 211 aa13.47□□□□□ -0.25
KDM3B-203ENST00000505756 MTFR1Q15390 333 aa13.47□□□□□ -0.25
KDM3B-203ENST00000505756 MORN1Q5T089 497 aa13.47□□□□□ -0.25
KDM3B-203ENST00000505756 WDR78Q5VTH9 848 aa13.47□□□□□ -0.25
KDM3B-203ENST00000505756 SLFN13Q68D06 897 aa13.47□□□□□ -0.25
KDM3B-203ENST00000505756 SAMD1Q6SPF0 538 aaPredicted RBP13.47□□□□□ -0.25
KDM3B-203ENST00000505756 PRPF38AQ8NAV1 312 aaKnown RBP13.47□□□□□ -0.25
KDM3B-203ENST00000505756 ESR2Q92731 530 aa13.47□□□□□ -0.25
KDM3B-203ENST00000505756 USP6NLQ92738 828 aa13.47□□□□□ -0.25
KDM3B-203ENST00000505756 GMCL1Q96IK5 515 aa13.47□□□□□ -0.25
KDM3B-203ENST00000505756 SLF1Q9BQI6 1058 aa13.47□□□□□ -0.25
KDM3B-203ENST00000505756 BACH2Q9BYV9 841 aa13.47□□□□□ -0.25
KDM3B-203ENST00000505756 IVNS1ABPQ9Y6Y0 642 aa13.47□□□□□ -0.25
KDM3B-203ENST00000505756 PLXNB2O15031 1838 aa13.47□□□□□ -0.25
KDM3B-203ENST00000505756 NEDD4P46934 1319 aa13.46□□□□□ -0.25
KDM3B-203ENST00000505756 SLC15A5A6NIM6 579 aa13.46□□□□□ -0.25
KDM3B-203ENST00000505756 SGSM2O43147 1006 aa13.46□□□□□ -0.25
KDM3B-203ENST00000505756 HMGCRP04035 888 aa13.46□□□□□ -0.25
KDM3B-203ENST00000505756 BMP3P12645 472 aa13.46□□□□□ -0.25
KDM3B-203ENST00000505756 ERCC3P19447 782 aa13.46□□□□□ -0.25
KDM3B-203ENST00000505756 CYP2B6P20813 491 aa13.46□□□□□ -0.25
KDM3B-203ENST00000505756 PTPREP23469 700 aa13.46□□□□□ -0.25
KDM3B-203ENST00000505756 MAP2K5Q13163 448 aa13.46□□□□□ -0.25
KDM3B-203ENST00000505756 GRB14Q14449 540 aa13.46□□□□□ -0.25
KDM3B-203ENST00000505756 PLS1Q14651 629 aa13.46□□□□□ -0.25
KDM3B-203ENST00000505756 TMEM132BQ14DG7 1078 aa13.46□□□□□ -0.25
KDM3B-203ENST00000505756 TRMT44Q8IYL2 757 aaKnown RBP13.46□□□□□ -0.25
KDM3B-203ENST00000505756 APBA2Q99767 749 aa13.46□□□□□ -0.25
KDM3B-203ENST00000505756 MROH8Q9H579 483 aa13.46□□□□□ -0.25
KDM3B-203ENST00000505756 FEM1BQ9UK73 627 aa13.46□□□□□ -0.25
KDM3B-203ENST00000505756 BRCA2P51587 3418 aa13.46□□□□□ -0.26
KDM3B-203ENST00000505756 STRNO43815 780 aa13.45□□□□□ -0.26
KDM3B-203ENST00000505756 SLC25A27O95847 323 aa13.45□□□□□ -0.26
KDM3B-203ENST00000505756 CCL5P13501 91 aa13.45□□□□□ -0.26
KDM3B-203ENST00000505756 COPB2P35606 906 aa13.45□□□□□ -0.26
KDM3B-203ENST00000505756 SLC1A4P43007 532 aa13.45□□□□□ -0.26
KDM3B-203ENST00000505756 REPS2Q8NFH8 660 aa13.45□□□□□ -0.26
KDM3B-203ENST00000505756 NKX2-3Q8TAU0 364 aa13.45□□□□□ -0.26
KDM3B-203ENST00000505756 TRIB2Q92519 343 aa13.45□□□□□ -0.26
KDM3B-203ENST00000505756 TTC14Q96N46 770 aa13.45□□□□□ -0.26
KDM3B-203ENST00000505756 RNF208Q9H0X6 261 aa13.45□□□□□ -0.26
KDM3B-203ENST00000505756 ZNF214Q9UL59 606 aaPredicted RBP13.45□□□□□ -0.26
KDM3B-203ENST00000505756 DOCK3Q8IZD9 2030 aa13.45□□□□□ -0.26
KDM3B-203ENST00000505756 CDC45O75419 566 aa13.44□□□□□ -0.26
KDM3B-203ENST00000505756 GJB1P08034 283 aa13.44□□□□□ -0.26
KDM3B-203ENST00000505756 HOXC6P09630 235 aa13.44□□□□□ -0.26
KDM3B-203ENST00000505756 TOP1P11387 765 aaKnown RBP13.44□□□□□ -0.26
KDM3B-203ENST00000505756 ZKSCAN1P17029 563 aaPredicted RBP13.44□□□□□ -0.26
KDM3B-203ENST00000505756 EN2P19622 333 aaPredicted RBP13.44□□□□□ -0.26
KDM3B-203ENST00000505756 MCCP23508 829 aa13.44□□□□□ -0.26
KDM3B-203ENST00000505756 STAT3P40763 770 aa13.44□□□□□ -0.26
KDM3B-203ENST00000505756 STAT2P52630 851 aa13.44□□□□□ -0.26
KDM3B-203ENST00000505756 FAM160B2Q86V87 743 aa13.44□□□□□ -0.26
KDM3B-203ENST00000505756 NCAPG2Q86XI2 1143 aa13.44□□□□□ -0.26
KDM3B-203ENST00000505756 RIOX2Q8IUF8 465 aa13.44□□□□□ -0.26
KDM3B-203ENST00000505756 ABRAQ8N0Z2 381 aa13.44□□□□□ -0.26
KDM3B-203ENST00000505756 KIFC2Q96AC6 838 aa13.44□□□□□ -0.26
KDM3B-203ENST00000505756 TMEM47Q9BQJ4 181 aa13.44□□□□□ -0.26
KDM3B-203ENST00000505756 KRT23Q9C075 422 aa13.44□□□□□ -0.26
KDM3B-203ENST00000505756 UNC93B1Q9H1C4 597 aa13.44□□□□□ -0.26
KDM3B-203ENST00000505756 CNNM2Q9H8M5 875 aa13.44□□□□□ -0.26
KDM3B-203ENST00000505756 U3KPZ7 1027 aaPredicted RBP13.44□□□□□ -0.26
KDM3B-203ENST00000505756 ZNF236Q9UL36 1845 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms