RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 PHF24Q9UPV7 400 aa8.37□□□□□ -1.07
NPIPB3-203ENST00000504841 TACC3Q9Y6A5 838 aa8.37□□□□□ -1.07
NPIPB3-203ENST00000504841 TMEM265A0A087WTH1 108 aa8.36□□□□□ -1.07
NPIPB3-203ENST00000504841 A0A1W2PQ45 241 aaPredicted RBP8.36□□□□□ -1.07
NPIPB3-203ENST00000504841 A0A1W2PQY0 241 aa8.36□□□□□ -1.07
NPIPB3-203ENST00000504841 CD44P16070 742 aaKnown RBP8.36□□□□□ -1.07
NPIPB3-203ENST00000504841 TAL1P17542 331 aaPredicted RBP8.36□□□□□ -1.07
NPIPB3-203ENST00000504841 CCDC129Q6ZRS4 1044 aa8.36□□□□□ -1.07
NPIPB3-203ENST00000504841 AACSQ86V21 672 aa8.36□□□□□ -1.07
NPIPB3-203ENST00000504841 MB21D1Q8N884 522 aa8.36□□□□□ -1.07
NPIPB3-203ENST00000504841 SDR42E1Q8WUS8 393 aa8.36□□□□□ -1.07
NPIPB3-203ENST00000504841 EAF2Q96CJ1 260 aaPredicted RBP8.36□□□□□ -1.07
NPIPB3-203ENST00000504841 CRNKL1Q9BZJ0 848 aaKnown RBP8.36□□□□□ -1.07
NPIPB3-203ENST00000504841 MROH8Q9H579 483 aa8.36□□□□□ -1.07
NPIPB3-203ENST00000504841 ARHGEF10LQ9HCE6 1279 aa8.36□□□□□ -1.07
NPIPB3-203ENST00000504841 STARD7Q9NQZ5 370 aa8.36□□□□□ -1.07
NPIPB3-203ENST00000504841 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.35□□□□□ -1.07
NPIPB3-203ENST00000504841 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.35□□□□□ -1.07
NPIPB3-203ENST00000504841 APBB1O00213 710 aa8.35□□□□□ -1.07
NPIPB3-203ENST00000504841 TNFRSF10AO00220 468 aa8.35□□□□□ -1.07
NPIPB3-203ENST00000504841 KIAA0355O15063 1070 aa8.35□□□□□ -1.07
NPIPB3-203ENST00000504841 AKR1A1P14550 325 aa8.35□□□□□ -1.07
NPIPB3-203ENST00000504841 AKR1B1P15121 316 aa8.35□□□□□ -1.07
NPIPB3-203ENST00000504841 SLC4A3P48751 1232 aa8.35□□□□□ -1.07
NPIPB3-203ENST00000504841 ICA1Q05084 483 aa8.35□□□□□ -1.07
NPIPB3-203ENST00000504841 GABPAQ06546 454 aa8.35□□□□□ -1.07
NPIPB3-203ENST00000504841 KCTD2Q14681 263 aa8.35□□□□□ -1.07
NPIPB3-203ENST00000504841 TMEM132BQ14DG7 1078 aa8.35□□□□□ -1.07
NPIPB3-203ENST00000504841 C1orf53Q5VUE5 145 aa8.35□□□□□ -1.07
NPIPB3-203ENST00000504841 TMEM179Q6ZVK1 233 aa8.35□□□□□ -1.07
NPIPB3-203ENST00000504841 IFNLR1Q8IU57 520 aaPredicted RBP8.35□□□□□ -1.07
NPIPB3-203ENST00000504841 ABRAQ8N0Z2 381 aa8.35□□□□□ -1.07
NPIPB3-203ENST00000504841 SSH3Q8TE77 659 aa8.35□□□□□ -1.07
NPIPB3-203ENST00000504841 TIFAQ96CG3 184 aa8.35□□□□□ -1.07
NPIPB3-203ENST00000504841 DYNLL2Q96FJ2 89 aa8.35□□□□□ -1.07
NPIPB3-203ENST00000504841 RIOK1Q9BRS2 568 aaKnown RBP8.35□□□□□ -1.07
NPIPB3-203ENST00000504841 ZNF576Q9H609 170 aa8.35□□□□□ -1.07
NPIPB3-203ENST00000504841 ZHX1Q9UKY1 873 aaPredicted RBP8.35□□□□□ -1.07
NPIPB3-203ENST00000504841 GRXCR1A8MXD5 290 aa8.34□□□□□ -1.07
NPIPB3-203ENST00000504841 DCDC2CA8MYV0 355 aa8.34□□□□□ -1.07
NPIPB3-203ENST00000504841 IGSF3O75054 1194 aa8.34□□□□□ -1.07
NPIPB3-203ENST00000504841 PDE6AP16499 860 aa8.34□□□□□ -1.07
NPIPB3-203ENST00000504841 PBX2P40425 430 aa8.34□□□□□ -1.07
NPIPB3-203ENST00000504841 ATP8B2P98198 1209 aa8.34□□□□□ -1.07
NPIPB3-203ENST00000504841 FAAP100Q0VG06 881 aa8.34□□□□□ -1.07
NPIPB3-203ENST00000504841 CCDC85BQ15834 202 aaPredicted RBP8.34□□□□□ -1.07
NPIPB3-203ENST00000504841 ZKSCAN2Q63HK3 967 aa8.34□□□□□ -1.07
NPIPB3-203ENST00000504841 ITPRIPQ8IWB1 547 aa8.34□□□□□ -1.07
NPIPB3-203ENST00000504841 LCORLQ8N3X6 602 aa8.34□□□□□ -1.07
NPIPB3-203ENST00000504841 GAS2L1Q99501 681 aaPredicted RBP8.34□□□□□ -1.07
NPIPB3-203ENST00000504841 DNAJC2Q99543 621 aaKnown RBP8.34□□□□□ -1.07
NPIPB3-203ENST00000504841 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.34□□□□□ -1.07
NPIPB3-203ENST00000504841 TINF2Q9BSI4 451 aa8.34□□□□□ -1.07
NPIPB3-203ENST00000504841 PPP1R12CQ9BZL4 782 aa8.34□□□□□ -1.07
NPIPB3-203ENST00000504841 PRDM12Q9H4Q4 367 aa8.34□□□□□ -1.07
NPIPB3-203ENST00000504841 SH2D4AQ9H788 454 aa8.34□□□□□ -1.07
NPIPB3-203ENST00000504841 VCPKMTQ9H867 229 aa8.34□□□□□ -1.07
NPIPB3-203ENST00000504841 ARMT1Q9H993 441 aa8.34□□□□□ -1.07
NPIPB3-203ENST00000504841 IL1RAPL2Q9NP60 686 aa8.34□□□□□ -1.07
NPIPB3-203ENST00000504841 FBXO28Q9NVF7 368 aa8.34□□□□□ -1.07
NPIPB3-203ENST00000504841 THEGQ9P2T0 379 aa8.34□□□□□ -1.07
NPIPB3-203ENST00000504841 CNPY2Q9Y2B0 182 aa8.34□□□□□ -1.07
NPIPB3-203ENST00000504841 EXOC6BQ9Y2D4 811 aa8.34□□□□□ -1.07
NPIPB3-203ENST00000504841 ZNF532Q9HCE3 1301 aa8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 SYNRGQ9UMZ2 1314 aa8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 CYP2D7A0A087X1C5 515 aa8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 MYADML2A6NDP7 307 aa8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 SMIM22K7EJ46 135 aa8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 GOLIM4O00461 696 aa8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 WDR46O15213 610 aaKnown RBP8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 PRKAB2O43741 272 aa8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 SLC25A27O95847 323 aa8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 IGFBP4P22692 258 aa8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 ACLYP53396 1101 aa8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 IRX5P78411 483 aaPredicted RBP8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 ZNF792Q3KQV3 632 aa8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 SLC9C2Q5TAH2 1124 aa8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 RIOX2Q8IUF8 465 aa8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 FTSJ3Q8IY81 847 aaKnown RBP8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 IL27Q8NEV9 243 aa8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 ADAMTS19Q8TE59 1207 aa8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 NUP133Q8WUM0 1156 aa8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 VTI1AQ96AJ9 217 aa8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 DCP1AQ9NPI6 582 aaPredicted RBP8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 SWAP70Q9UH65 585 aa8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 NOP58Q9Y2X3 529 aaKnown RBP8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 TMX2Q9Y320 296 aa8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 ROBO3Q96MS0 1386 aa8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 MYH8P13535 1937 aa8.33□□□□□ -1.08
NPIPB3-203ENST00000504841 SMCHD1A6NHR9 2005 aa8.32□□□□□ -1.08
NPIPB3-203ENST00000504841 PLXNA1Q9UIW2 1896 aa8.32□□□□□ -1.08
NPIPB3-203ENST00000504841 A0A0C4DFX4 3053 aa8.32□□□□□ -1.08
NPIPB3-203ENST00000504841 COL11A1P12107 1806 aaPredicted RBP8.32□□□□□ -1.08
NPIPB3-203ENST00000504841 PARP14Q460N5 1801 aa8.32□□□□□ -1.08
NPIPB3-203ENST00000504841 ADAMTS4O75173 837 aa8.32□□□□□ -1.08
NPIPB3-203ENST00000504841 C6orf222P0C671 652 aaPredicted RBP8.32□□□□□ -1.08
NPIPB3-203ENST00000504841 ZNF865P0CJ78 1059 aaPredicted RBP8.32□□□□□ -1.08
NPIPB3-203ENST00000504841 ACRP10323 421 aa8.32□□□□□ -1.08
NPIPB3-203ENST00000504841 EEF2P13639 858 aaKnown RBP8.32□□□□□ -1.08
NPIPB3-203ENST00000504841 CSF2RAP15509 400 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms