RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 CTNND1O60716 968 aaKnown RBP11.72□□□□□ -0.53
DDX41-203ENST00000504781 DTNBO60941 627 aa11.72□□□□□ -0.53
DDX41-203ENST00000504781 PRPF40AO75400 957 aaKnown RBP11.72□□□□□ -0.53
DDX41-203ENST00000504781 EGFRP00533 1210 aa11.72□□□□□ -0.53
DDX41-203ENST00000504781 PDHBP11177 359 aa11.72□□□□□ -0.53
DDX41-203ENST00000504781 EEF2P13639 858 aaKnown RBP11.72□□□□□ -0.53
DDX41-203ENST00000504781 GUCY1A2P33402 732 aa11.72□□□□□ -0.53
DDX41-203ENST00000504781 ECE1P42892 770 aa11.72□□□□□ -0.53
DDX41-203ENST00000504781 LBX1P52954 281 aa11.72□□□□□ -0.53
DDX41-203ENST00000504781 SEPT2Q15019 361 aa11.72□□□□□ -0.53
DDX41-203ENST00000504781 PFKFB3Q16875 520 aaPredicted RBP11.72□□□□□ -0.53
DDX41-203ENST00000504781 SUPT20HL1Q3ZLR7 823 aa11.72□□□□□ -0.53
DDX41-203ENST00000504781 DCAF15Q66K64 600 aa11.72□□□□□ -0.53
DDX41-203ENST00000504781 GALNT17Q6IS24 598 aa11.72□□□□□ -0.53
DDX41-203ENST00000504781 USP48Q86UV5 1035 aa11.72□□□□□ -0.53
DDX41-203ENST00000504781 BEGAINQ9BUH8 593 aa11.72□□□□□ -0.53
DDX41-203ENST00000504781 FOXP1Q9H334 677 aaPredicted RBP11.72□□□□□ -0.53
DDX41-203ENST00000504781 RIOX1Q9H6W3 641 aa11.72□□□□□ -0.53
DDX41-203ENST00000504781 WBP1LQ9NX94 342 aa11.72□□□□□ -0.53
DDX41-203ENST00000504781 TCHHQ07283 1943 aa11.71□□□□□ -0.53
DDX41-203ENST00000504781 PHF20L1A8MW92 1017 aa11.71□□□□□ -0.53
DDX41-203ENST00000504781 PLEKHA8P1O95397 391 aa11.71□□□□□ -0.53
DDX41-203ENST00000504781 GH2P01242 217 aa11.71□□□□□ -0.53
DDX41-203ENST00000504781 MMP1P03956 469 aa11.71□□□□□ -0.53
DDX41-203ENST00000504781 ASNSP08243 561 aa11.71□□□□□ -0.53
DDX41-203ENST00000504781 SCG2P13521 617 aa11.71□□□□□ -0.53
DDX41-203ENST00000504781 MAP2K1Q02750 393 aaPredicted RBP11.71□□□□□ -0.53
DDX41-203ENST00000504781 DNM1Q05193 864 aaKnown RBP11.71□□□□□ -0.53
DDX41-203ENST00000504781 USP17L2Q6R6M4 530 aa11.71□□□□□ -0.53
DDX41-203ENST00000504781 FERMT3Q86UX7 667 aa11.71□□□□□ -0.53
DDX41-203ENST00000504781 CMTR1Q8N1G2 835 aaKnown RBP11.71□□□□□ -0.53
DDX41-203ENST00000504781 STAG2Q8N3U4 1231 aa11.71□□□□□ -0.53
DDX41-203ENST00000504781 GMCL1P1Q8NEA9 526 aa11.71□□□□□ -0.53
DDX41-203ENST00000504781 ZC3H15Q8WU90 426 aaKnown RBP11.71□□□□□ -0.53
DDX41-203ENST00000504781 DCAF4Q8WV16 495 aa11.71□□□□□ -0.53
DDX41-203ENST00000504781 ARHGEF10LQ9HCE6 1279 aa11.71□□□□□ -0.53
DDX41-203ENST00000504781 RCOR1Q9UKL0 485 aa11.71□□□□□ -0.53
DDX41-203ENST00000504781 TLL2Q9Y6L7 1015 aa11.71□□□□□ -0.53
DDX41-203ENST00000504781 GREB1LQ9C091 1923 aaPredicted RBP11.7□□□□□ -0.54
DDX41-203ENST00000504781 SIPA1L1O43166 1804 aa11.7□□□□□ -0.54
DDX41-203ENST00000504781 ELP1O95163 1332 aa11.7□□□□□ -0.54
DDX41-203ENST00000504781 FAM196BA6NMK8 535 aa11.7□□□□□ -0.54
DDX41-203ENST00000504781 USP17L5A8MUK1 530 aa11.7□□□□□ -0.54
DDX41-203ENST00000504781 AOC2O75106 756 aa11.7□□□□□ -0.54
DDX41-203ENST00000504781 PPFIA3O75145 1194 aa11.7□□□□□ -0.54
DDX41-203ENST00000504781 CALML3P27482 149 aa11.7□□□□□ -0.54
DDX41-203ENST00000504781 GUCY1B3Q02153 619 aa11.7□□□□□ -0.54
DDX41-203ENST00000504781 KIF23Q02241 960 aaPredicted RBP11.7□□□□□ -0.54
DDX41-203ENST00000504781 ZNF543Q08ER8 600 aa11.7□□□□□ -0.54
DDX41-203ENST00000504781 DLK2Q6UY11 383 aa11.7□□□□□ -0.54
DDX41-203ENST00000504781 MIGA2Q7L4E1 593 aa11.7□□□□□ -0.54
DDX41-203ENST00000504781 DCPSQ96C86 337 aaKnown RBP11.7□□□□□ -0.54
DDX41-203ENST00000504781 RRP36Q96EU6 259 aaKnown RBP11.7□□□□□ -0.54
DDX41-203ENST00000504781 GMCL1Q96IK5 515 aa11.7□□□□□ -0.54
DDX41-203ENST00000504781 AIFM3Q96NN9 605 aa11.7□□□□□ -0.54
DDX41-203ENST00000504781 PHF20Q9BVI0 1012 aa11.7□□□□□ -0.54
DDX41-203ENST00000504781 SH2D4AQ9H788 454 aa11.7□□□□□ -0.54
DDX41-203ENST00000504781 TFIP11Q9UBB9 837 aaKnown RBP11.7□□□□□ -0.54
DDX41-203ENST00000504781 ZNF112Q9UJU3 913 aa11.7□□□□□ -0.54
DDX41-203ENST00000504781 TMX2Q9Y320 296 aa11.7□□□□□ -0.54
DDX41-203ENST00000504781 CNTNAP5Q8WYK1 1306 aa11.69□□□□□ -0.54
DDX41-203ENST00000504781 MYH6P13533 1939 aa11.69□□□□□ -0.54
DDX41-203ENST00000504781 F5H6K3 240 aa11.69□□□□□ -0.54
DDX41-203ENST00000504781 hCG_1984214I3L0E3 225 aa11.69□□□□□ -0.54
DDX41-203ENST00000504781 MBD3O95983 291 aa11.69□□□□□ -0.54
DDX41-203ENST00000504781 ICA1Q05084 483 aa11.69□□□□□ -0.54
DDX41-203ENST00000504781 KLRC3Q07444 240 aa11.69□□□□□ -0.54
DDX41-203ENST00000504781 RRP1BQ14684 758 aaKnown RBP11.69□□□□□ -0.54
DDX41-203ENST00000504781 KLHL40Q2TBA0 621 aa11.69□□□□□ -0.54
DDX41-203ENST00000504781 ANGEL2Q5VTE6 544 aaKnown RBP11.69□□□□□ -0.54
DDX41-203ENST00000504781 SLFN13Q68D06 897 aa11.69□□□□□ -0.54
DDX41-203ENST00000504781 OTUD7BQ6GQQ9 843 aa11.69□□□□□ -0.54
DDX41-203ENST00000504781 KRT26Q7Z3Y9 468 aa11.69□□□□□ -0.54
DDX41-203ENST00000504781 SAPCD2Q86UD0 394 aa11.69□□□□□ -0.54
DDX41-203ENST00000504781 ZNF713Q8N859 430 aaPredicted RBP11.69□□□□□ -0.54
DDX41-203ENST00000504781 CCDC12Q8WUD4 166 aaPredicted RBP11.69□□□□□ -0.54
DDX41-203ENST00000504781 ZNF341Q9BYN7 854 aa11.69□□□□□ -0.54
DDX41-203ENST00000504781 BRMS1Q9HCU9 246 aa11.69□□□□□ -0.54
DDX41-203ENST00000504781 PRDM10Q9NQV6 1147 aa11.69□□□□□ -0.54
DDX41-203ENST00000504781 RTEL1Q9NZ71 1219 aa11.69□□□□□ -0.54
DDX41-203ENST00000504781 DDX49Q9Y6V7 483 aaKnown RBP11.69□□□□□ -0.54
DDX41-203ENST00000504781 CYTH3O43739 400 aa11.68□□□□□ -0.54
DDX41-203ENST00000504781 PLA2G6O60733 806 aa11.68□□□□□ -0.54
DDX41-203ENST00000504781 GDF11O95390 407 aa11.68□□□□□ -0.54
DDX41-203ENST00000504781 SLURP2P0DP57 97 aa11.68□□□□□ -0.54
DDX41-203ENST00000504781 SLC1A4P43007 532 aa11.68□□□□□ -0.54
DDX41-203ENST00000504781 NLRP5P59047 1200 aa11.68□□□□□ -0.54
DDX41-203ENST00000504781 UBE2HP62256 183 aa11.68□□□□□ -0.54
DDX41-203ENST00000504781 JAG1P78504 1218 aa11.68□□□□□ -0.54
DDX41-203ENST00000504781 ATP2B2Q01814 1243 aa11.68□□□□□ -0.54
DDX41-203ENST00000504781 TRAF1Q13077 416 aa11.68□□□□□ -0.54
DDX41-203ENST00000504781 GNL2Q13823 731 aaKnown RBP11.68□□□□□ -0.54
DDX41-203ENST00000504781 NBPF12Q5TAG4 269 aaPredicted RBP11.68□□□□□ -0.54
DDX41-203ENST00000504781 BTNL9Q6UXG8 535 aa11.68□□□□□ -0.54
DDX41-203ENST00000504781 MTMR8Q96EF0 704 aa11.68□□□□□ -0.54
DDX41-203ENST00000504781 SPATA32Q96LK8 384 aa11.68□□□□□ -0.54
DDX41-203ENST00000504781 GOPCQ9HD26 462 aa11.68□□□□□ -0.54
DDX41-203ENST00000504781 BARHL2Q9NY43 387 aa11.68□□□□□ -0.54
DDX41-203ENST00000504781 SEC63Q9UGP8 760 aaKnown RBP11.68□□□□□ -0.54
DDX41-203ENST00000504781 ZBTB21Q9ULJ3 1066 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms