RNA–Protein interactions for RNA: ENST00000504606.1

TRIO-206, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-206ENST00000504606 KLRF2D3W0D1 207 aa13.19□□□□□ -0.3
TRIO-206ENST00000504606 YY1P25490 414 aa13.19□□□□□ -0.3
TRIO-206ENST00000504606 FKBP1BP68106 108 aa13.19□□□□□ -0.3
TRIO-206ENST00000504606 SSRP1Q08945 709 aaKnown RBP13.19□□□□□ -0.3
TRIO-206ENST00000504606 MTMR2Q13614 643 aa13.19□□□□□ -0.3
TRIO-206ENST00000504606 GPATCH4Q5T3I0 446 aaKnown RBP13.19□□□□□ -0.3
TRIO-206ENST00000504606 LDLRAD1Q5T700 205 aa13.19□□□□□ -0.3
TRIO-206ENST00000504606 KCTD1Q719H9 257 aa13.19□□□□□ -0.3
TRIO-206ENST00000504606 TRIM22Q8IYM9 498 aa13.19□□□□□ -0.3
TRIO-206ENST00000504606 SPICE1Q8N0Z3 855 aa13.19□□□□□ -0.3
TRIO-206ENST00000504606 SRBD1Q8N5C6 995 aaKnown RBP13.19□□□□□ -0.3
TRIO-206ENST00000504606 C2orf69Q8N8R5 385 aa13.19□□□□□ -0.3
TRIO-206ENST00000504606 GMCL1Q96IK5 515 aa13.19□□□□□ -0.3
TRIO-206ENST00000504606 CLMNQ96JQ2 1002 aa13.19□□□□□ -0.3
TRIO-206ENST00000504606 NUP88Q99567 741 aaPredicted RBP13.19□□□□□ -0.3
TRIO-206ENST00000504606 LZTS2Q9BRK4 669 aa13.19□□□□□ -0.3
TRIO-206ENST00000504606 SLC26A6Q9BXS9 759 aa13.19□□□□□ -0.3
TRIO-206ENST00000504606 KIAA1683Q9H0B3 1180 aa13.19□□□□□ -0.3
TRIO-206ENST00000504606 ORC3Q9UBD5 711 aaPredicted RBP13.19□□□□□ -0.3
TRIO-206ENST00000504606 TRPM7Q96QT4 1865 aa13.19□□□□□ -0.3
TRIO-206ENST00000504606 CNTNAP5Q8WYK1 1306 aa13.18□□□□□ -0.3
TRIO-206ENST00000504606 STK36Q9NRP7 1315 aa13.18□□□□□ -0.3
TRIO-206ENST00000504606 SPDYE5A6NIY4 337 aa13.18□□□□□ -0.3
TRIO-206ENST00000504606 FMNL1O95466 1100 aaPredicted RBP13.18□□□□□ -0.3
TRIO-206ENST00000504606 BMP3P12645 472 aa13.18□□□□□ -0.3
TRIO-206ENST00000504606 USP14P54578 494 aa13.18□□□□□ -0.3
TRIO-206ENST00000504606 AKAP17AQ02040 695 aaKnown RBP13.18□□□□□ -0.3
TRIO-206ENST00000504606 KIAA1755Q5JYT7 1200 aa13.18□□□□□ -0.3
TRIO-206ENST00000504606 NBPF11Q86T75 865 aa13.18□□□□□ -0.3
TRIO-206ENST00000504606 ERO1BQ86YB8 467 aa13.18□□□□□ -0.3
TRIO-206ENST00000504606 SMC1BQ8NDV3 1235 aa13.18□□□□□ -0.3
TRIO-206ENST00000504606 CNKSR2Q8WXI2 1034 aa13.18□□□□□ -0.3
TRIO-206ENST00000504606 RNF26Q9BY78 433 aaPredicted RBP13.18□□□□□ -0.3
TRIO-206ENST00000504606 UBA5Q9GZZ9 404 aa13.18□□□□□ -0.3
TRIO-206ENST00000504606 CPVLQ9H3G5 476 aa13.18□□□□□ -0.3
TRIO-206ENST00000504606 KIF3AQ9Y496 699 aa13.18□□□□□ -0.3
TRIO-206ENST00000504606 UNCXA6NJT0 531 aa13.17□□□□□ -0.3
TRIO-206ENST00000504606 FDPSP14324 419 aaKnown RBP13.17□□□□□ -0.3
TRIO-206ENST00000504606 BACE1P56817 501 aa13.17□□□□□ -0.3
TRIO-206ENST00000504606 PPATQ06203 517 aa13.17□□□□□ -0.3
TRIO-206ENST00000504606 FUT2Q10981 343 aa13.17□□□□□ -0.3
TRIO-206ENST00000504606 DGKZQ13574 1117 aa13.17□□□□□ -0.3
TRIO-206ENST00000504606 FAM83BQ5T0W9 1011 aa13.17□□□□□ -0.3
TRIO-206ENST00000504606 TTBK2Q6IQ55 1244 aa13.17□□□□□ -0.3
TRIO-206ENST00000504606 LPAR1Q92633 364 aa13.17□□□□□ -0.3
TRIO-206ENST00000504606 OTUD5Q96G74 571 aa13.17□□□□□ -0.3
TRIO-206ENST00000504606 AFG3L2Q9Y4W6 797 aa13.17□□□□□ -0.3
TRIO-206ENST00000504606 C19orf81C9J6K1 198 aa13.16□□□□□ -0.3
TRIO-206ENST00000504606 WDR46O15213 610 aaKnown RBP13.16□□□□□ -0.3
TRIO-206ENST00000504606 PRPF3O43395 683 aaKnown RBP13.16□□□□□ -0.3
TRIO-206ENST00000504606 CYTH3O43739 400 aa13.16□□□□□ -0.3
TRIO-206ENST00000504606 TOMM70O94826 608 aa13.16□□□□□ -0.3
TRIO-206ENST00000504606 DEXIO95424 95 aa13.16□□□□□ -0.3
TRIO-206ENST00000504606 SMARCA1P28370 1054 aa13.16□□□□□ -0.3
TRIO-206ENST00000504606 DDIT3P35638 169 aa13.16□□□□□ -0.3
TRIO-206ENST00000504606 SLC16A2P36021 539 aa13.16□□□□□ -0.3
TRIO-206ENST00000504606 FOSBP53539 338 aa13.16□□□□□ -0.3
TRIO-206ENST00000504606 IKQ13123 557 aaPredicted RBP13.16□□□□□ -0.3
TRIO-206ENST00000504606 SLC35G1Q2M3R5 365 aa13.16□□□□□ -0.3
TRIO-206ENST00000504606 CST9Q5W186 159 aa13.16□□□□□ -0.3
TRIO-206ENST00000504606 LARP1BQ659C4 914 aaKnown RBP13.16□□□□□ -0.3
TRIO-206ENST00000504606 PIBF1Q8WXW3 757 aa13.16□□□□□ -0.3
TRIO-206ENST00000504606 OPTNQ96CV9 577 aa13.16□□□□□ -0.3
TRIO-206ENST00000504606 SLC10A4Q96EP9 437 aa13.16□□□□□ -0.3
TRIO-206ENST00000504606 SPZ1Q9BXG8 430 aa13.16□□□□□ -0.3
TRIO-206ENST00000504606 VAT1LQ9HCJ6 419 aa13.16□□□□□ -0.3
TRIO-206ENST00000504606 EMILIN3Q9NT22 766 aa13.16□□□□□ -0.3
TRIO-206ENST00000504606 TMOD4Q9NZQ9 345 aa13.16□□□□□ -0.3
TRIO-206ENST00000504606 V9GY48 417 aaPredicted RBP13.16□□□□□ -0.3
TRIO-206ENST00000504606 PASKQ96RG2 1323 aa13.15□□□□□ -0.3
TRIO-206ENST00000504606 MYH6P13533 1939 aa13.15□□□□□ -0.3
TRIO-206ENST00000504606 hCG_1642624A0A1W2PR95 340 aa13.15□□□□□ -0.3
TRIO-206ENST00000504606 TMEM232C9JQI7 657 aa13.15□□□□□ -0.3
TRIO-206ENST00000504606 PDCP20941 246 aa13.15□□□□□ -0.3
TRIO-206ENST00000504606 HMGCS2P54868 508 aa13.15□□□□□ -0.3
TRIO-206ENST00000504606 PPIL2Q13356 520 aa13.15□□□□□ -0.3
TRIO-206ENST00000504606 HOMER1Q86YM7 354 aa13.15□□□□□ -0.3
TRIO-206ENST00000504606 ZNF784Q8NCA9 323 aaPredicted RBP13.15□□□□□ -0.3
TRIO-206ENST00000504606 RBM46Q8TBY0 533 aaKnown RBP13.15□□□□□ -0.3
TRIO-206ENST00000504606 WASF1Q92558 559 aa13.15□□□□□ -0.3
TRIO-206ENST00000504606 C12orf42Q96LP6 360 aa13.15□□□□□ -0.3
TRIO-206ENST00000504606 AIFM3Q96NN9 605 aa13.15□□□□□ -0.3
TRIO-206ENST00000504606 ALG1Q9BT22 464 aa13.15□□□□□ -0.3
TRIO-206ENST00000504606 RIOX1Q9H6W3 641 aa13.15□□□□□ -0.3
TRIO-206ENST00000504606 CHMP5Q9NZZ3 219 aa13.15□□□□□ -0.3
TRIO-206ENST00000504606 RBM27Q9P2N5 1060 aaKnown RBP13.15□□□□□ -0.3
TRIO-206ENST00000504606 CIZ1Q9ULV3 898 aaPredicted RBP13.15□□□□□ -0.3
TRIO-206ENST00000504606 IRF6O14896 467 aa13.14□□□□□ -0.31
TRIO-206ENST00000504606 VCAM1P19320 739 aa13.14□□□□□ -0.31
TRIO-206ENST00000504606 SYT1P21579 422 aa13.14□□□□□ -0.31
TRIO-206ENST00000504606 STAT2P52630 851 aa13.14□□□□□ -0.31
TRIO-206ENST00000504606 PKN1Q16512 942 aa13.14□□□□□ -0.31
TRIO-206ENST00000504606 SH3D19Q5HYK7 790 aa13.14□□□□□ -0.31
TRIO-206ENST00000504606 SYDE2Q5VT97 1194 aa13.14□□□□□ -0.31
TRIO-206ENST00000504606 ADGRF4Q8IZF3 695 aa13.14□□□□□ -0.31
TRIO-206ENST00000504606 RRP36Q96EU6 259 aaKnown RBP13.14□□□□□ -0.31
TRIO-206ENST00000504606 C8orf76Q96K31 380 aa13.14□□□□□ -0.31
TRIO-206ENST00000504606 PIGSQ96S52 555 aa13.14□□□□□ -0.31
TRIO-206ENST00000504606 RPAP3Q9H6T3 665 aaPredicted RBP13.14□□□□□ -0.31
TRIO-206ENST00000504606 SEC63Q9UGP8 760 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms