RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 WNK3Q9BYP7 1800 aa7.34□□□□□ -1.24
CLCN3-203ENST00000502998 TONSLQ96HA7 1378 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 RGPD5Q99666 1765 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 CCDC171Q6TFL3 1326 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 WDR17Q8IZU2 1322 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 ATXN2Q99700 1313 aaKnown RBP7.33□□□□□ -1.24
CLCN3-203ENST00000502998 MAPK8IP3Q9UPT6 1336 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 NFAT5O94916 1531 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 ERICH2A1L162 156 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 TARSL2A2RTX5 802 aaKnown RBP7.33□□□□□ -1.24
CLCN3-203ENST00000502998 ENO4A6NNW6 628 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 LIN7AO14910 233 aaPredicted RBP7.33□□□□□ -1.24
CLCN3-203ENST00000502998 SART1O43290 800 aaKnown RBP7.33□□□□□ -1.24
CLCN3-203ENST00000502998 PNMA6AP0CW24 399 aaPredicted RBP7.33□□□□□ -1.24
CLCN3-203ENST00000502998 HSPA1AP0DMV8 641 aaKnown RBP7.33□□□□□ -1.24
CLCN3-203ENST00000502998 HSPA1BP0DMV9 641 aaKnown RBP7.33□□□□□ -1.24
CLCN3-203ENST00000502998 COL6A1P12109 1028 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 SKIP12755 728 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 EZRP15311 586 aaKnown RBP7.33□□□□□ -1.24
CLCN3-203ENST00000502998 PLA2G4AP47712 749 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 USP4Q13107 963 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 MAPRE1Q15691 268 aaKnown RBP7.33□□□□□ -1.24
CLCN3-203ENST00000502998 USH1GQ495M9 461 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 THOC7Q6I9Y2 204 aaKnown RBP7.33□□□□□ -1.24
CLCN3-203ENST00000502998 KCNH5Q8NCM2 988 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 SUN5Q8TC36 379 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 MAML1Q92585 1016 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 RUNDC1Q96C34 613 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 GCC1Q96CN9 775 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 MRRFQ96E11 262 aaKnown RBP7.33□□□□□ -1.24
CLCN3-203ENST00000502998 TBC1D32Q96NH3 1257 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 GORASP1Q9BQQ3 440 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 BHMT2Q9H2M3 363 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 ACBD3Q9H3P7 528 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 ATP6V0A4Q9HBG4 840 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 IL20Q9NYY1 176 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 KIAA1468Q9P260 1216 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 TUBGCP4Q9UGJ1 667 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 IP6K2Q9UHH9 426 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 PAIP2BQ9ULR5 123 aaKnown RBP7.33□□□□□ -1.24
CLCN3-203ENST00000502998 MAPK8IP1Q9UQF2 711 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 PRELID1Q9Y255 219 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 CARD8Q9Y2G2 431 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 SPO11Q9Y5K1 396 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 FHOD1Q9Y613 1164 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 SBF2Q86WG5 1849 aa7.33□□□□□ -1.24
CLCN3-203ENST00000502998 SLC26A4O43511 780 aa7.32□□□□□ -1.24
CLCN3-203ENST00000502998 PLIN1O60240 522 aa7.32□□□□□ -1.24
CLCN3-203ENST00000502998 MGEA5O60502 916 aa7.32□□□□□ -1.24
CLCN3-203ENST00000502998 PENKP01210 267 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-203ENST00000502998 HNRNPCP07910 306 aaKnown RBP eCLIP7.32□□□□□ -1.24
CLCN3-203ENST00000502998 TROVE2P10155 538 aaKnown RBP eCLIP7.32□□□□□ -1.24
CLCN3-203ENST00000502998 BCRP11274 1271 aa7.32□□□□□ -1.24
CLCN3-203ENST00000502998 POU5F1BQ06416 359 aa7.32□□□□□ -1.24
CLCN3-203ENST00000502998 BTG3Q14201 252 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-203ENST00000502998 RASA2Q15283 850 aa7.32□□□□□ -1.24
CLCN3-203ENST00000502998 ZSCAN23Q3MJ62 389 aa7.32□□□□□ -1.24
CLCN3-203ENST00000502998 NBPF14Q5TI25 921 aa7.32□□□□□ -1.24
CLCN3-203ENST00000502998 TMC6Q7Z403 805 aa7.32□□□□□ -1.24
CLCN3-203ENST00000502998 CTNNBL1Q8WYA6 563 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-203ENST00000502998 APPBP2Q92624 585 aa7.32□□□□□ -1.24
CLCN3-203ENST00000502998 ZKSCAN4Q969J2 545 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-203ENST00000502998 ERP27Q96DN0 273 aa7.32□□□□□ -1.24
CLCN3-203ENST00000502998 SPDL1Q96EA4 605 aa7.32□□□□□ -1.24
CLCN3-203ENST00000502998 ZNF512BQ96KM6 892 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-203ENST00000502998 NEK1Q96PY6 1258 aa7.32□□□□□ -1.24
CLCN3-203ENST00000502998 SYT17Q9BSW7 474 aa7.32□□□□□ -1.24
CLCN3-203ENST00000502998 FHDC1Q9C0D6 1143 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-203ENST00000502998 TCF7L2Q9NQB0 619 aa7.32□□□□□ -1.24
CLCN3-203ENST00000502998 KRT82Q9NSB4 513 aa7.32□□□□□ -1.24
CLCN3-203ENST00000502998 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-203ENST00000502998 NOSIPQ9Y314 301 aaKnown RBP7.32□□□□□ -1.24
CLCN3-203ENST00000502998 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.32□□□□□ -1.24
CLCN3-203ENST00000502998 OVOS2A0A0G2JMS6 1433 aa7.32□□□□□ -1.24
CLCN3-203ENST00000502998 OVOS2A0A0J9YW53 1432 aa7.32□□□□□ -1.24
CLCN3-203ENST00000502998 OVOS2Q6IE36 1432 aa7.32□□□□□ -1.24
CLCN3-203ENST00000502998 KAT6BQ8WYB5 2073 aa7.32□□□□□ -1.24
CLCN3-203ENST00000502998 USP31Q70CQ4 1352 aa7.32□□□□□ -1.24
CLCN3-203ENST00000502998 USP54Q70EL1 1684 aa7.32□□□□□ -1.24
CLCN3-203ENST00000502998 ELP1O95163 1332 aa7.31□□□□□ -1.24
CLCN3-203ENST00000502998 M0R2C6 588 aa7.31□□□□□ -1.24
CLCN3-203ENST00000502998 ABLIM1O14639 778 aa7.31□□□□□ -1.24
CLCN3-203ENST00000502998 DIAPH1O60610 1272 aaKnown RBP7.31□□□□□ -1.24
CLCN3-203ENST00000502998 DIAPH2O60879 1101 aa7.31□□□□□ -1.24
CLCN3-203ENST00000502998 RNF8O76064 485 aa7.31□□□□□ -1.24
CLCN3-203ENST00000502998 MBD4O95243 580 aa7.31□□□□□ -1.24
CLCN3-203ENST00000502998 PSMA3P25788 255 aa7.31□□□□□ -1.24
CLCN3-203ENST00000502998 FNTAP49354 379 aa7.31□□□□□ -1.24
CLCN3-203ENST00000502998 MAP7Q14244 749 aa7.31□□□□□ -1.24
CLCN3-203ENST00000502998 PPP2R5BQ15173 497 aa7.31□□□□□ -1.24
CLCN3-203ENST00000502998 ENOX2Q16206 610 aaKnown RBP7.31□□□□□ -1.24
CLCN3-203ENST00000502998 LONRF1Q17RB8 773 aa7.31□□□□□ -1.24
CLCN3-203ENST00000502998 SMUG1Q53HV7 270 aa7.31□□□□□ -1.24
CLCN3-203ENST00000502998 CFAP58Q5T655 872 aa7.31□□□□□ -1.24
CLCN3-203ENST00000502998 CREB3L3Q68CJ9 461 aa7.31□□□□□ -1.24
CLCN3-203ENST00000502998 CCSAPQ6IQ19 270 aaPredicted RBP7.31□□□□□ -1.24
CLCN3-203ENST00000502998 FBXO38Q6PIJ6 1188 aa7.31□□□□□ -1.24
CLCN3-203ENST00000502998 DPH6Q7L8W6 267 aa7.31□□□□□ -1.24
CLCN3-203ENST00000502998 NME9Q86XW9 330 aa7.31□□□□□ -1.24
CLCN3-203ENST00000502998 REXO1L1PQ8IX06 675 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms