RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 APBA2Q99767 749 aa9.32□□□□□ -0.92
NEDD4-203ENST00000502612 LRRC4CQ9HCJ2 640 aa9.32□□□□□ -0.92
NEDD4-203ENST00000502612 GTF2IRD1Q9UHL9 959 aa9.32□□□□□ -0.92
NEDD4-203ENST00000502612 LEMD3Q9Y2U8 911 aa9.32□□□□□ -0.92
NEDD4-203ENST00000502612 ZNF865P0CJ78 1059 aaPredicted RBP9.31□□□□□ -0.92
NEDD4-203ENST00000502612 ZNF445P59923 1031 aa9.31□□□□□ -0.92
NEDD4-203ENST00000502612 SQSTM1Q13501 440 aa9.31□□□□□ -0.92
NEDD4-203ENST00000502612 GPAT2Q6NUI2 795 aa9.31□□□□□ -0.92
NEDD4-203ENST00000502612 MFSD4AQ8N468 514 aa9.31□□□□□ -0.92
NEDD4-203ENST00000502612 OSBPL1AQ9BXW6 950 aa9.31□□□□□ -0.92
NEDD4-203ENST00000502612 CADPSQ9ULU8 1353 aa9.31□□□□□ -0.92
NEDD4-203ENST00000502612 A0A1W2PQU0 124 aa9.3□□□□□ -0.92
NEDD4-203ENST00000502612 IGF2BP3O00425 579 aaKnown RBP eCLIP9.3□□□□□ -0.92
NEDD4-203ENST00000502612 MEIS1O00470 390 aa9.3□□□□□ -0.92
NEDD4-203ENST00000502612 DYRK3O43781 588 aa9.3□□□□□ -0.92
NEDD4-203ENST00000502612 ADCY3O60266 1144 aa9.3□□□□□ -0.92
NEDD4-203ENST00000502612 ITGAVP06756 1048 aa9.3□□□□□ -0.92
NEDD4-203ENST00000502612 H2AFB1P0C5Y9 115 aa9.3□□□□□ -0.92
NEDD4-203ENST00000502612 H2AFB2P0C5Z0 115 aa9.3□□□□□ -0.92
NEDD4-203ENST00000502612 FAM153BP0C7A2 387 aa9.3□□□□□ -0.92
NEDD4-203ENST00000502612 ZNF143P52747 638 aaPredicted RBP9.3□□□□□ -0.92
NEDD4-203ENST00000502612 OXCT1P55809 520 aa9.3□□□□□ -0.92
NEDD4-203ENST00000502612 TCEAL1Q15170 157 aa9.3□□□□□ -0.92
NEDD4-203ENST00000502612 DUSP27Q5VZP5 1158 aa9.3□□□□□ -0.92
NEDD4-203ENST00000502612 LRRN4CLQ8ND94 238 aa9.3□□□□□ -0.92
NEDD4-203ENST00000502612 SPATA9Q9BWV2 254 aa9.3□□□□□ -0.92
NEDD4-203ENST00000502612 GBP3Q9H0R5 595 aa9.3□□□□□ -0.92
NEDD4-203ENST00000502612 WHRNQ9P202 907 aa9.3□□□□□ -0.92
NEDD4-203ENST00000502612 SUGT1Q9Y2Z0 365 aa9.3□□□□□ -0.92
NEDD4-203ENST00000502612 ESYT3A0FGR9 886 aa9.29□□□□□ -0.92
NEDD4-203ENST00000502612 WASH4PA8MWX3 477 aa9.29□□□□□ -0.92
NEDD4-203ENST00000502612 MSTNO14793 375 aa9.29□□□□□ -0.92
NEDD4-203ENST00000502612 PRAMEF1O95521 474 aa9.29□□□□□ -0.92
NEDD4-203ENST00000502612 ITGA4P13612 1032 aa9.29□□□□□ -0.92
NEDD4-203ENST00000502612 KIR3DL1P43629 444 aa9.29□□□□□ -0.92
NEDD4-203ENST00000502612 CYP27A1Q02318 531 aa9.29□□□□□ -0.92
NEDD4-203ENST00000502612 PPP2R5DQ14738 602 aa9.29□□□□□ -0.92
NEDD4-203ENST00000502612 C2orf27AQ580R0 203 aa9.29□□□□□ -0.92
NEDD4-203ENST00000502612 C22orf34Q6ZV56 151 aa9.29□□□□□ -0.92
NEDD4-203ENST00000502612 ZNF227Q86WZ6 799 aa9.29□□□□□ -0.92
NEDD4-203ENST00000502612 EPN3Q9H201 632 aa9.29□□□□□ -0.92
NEDD4-203ENST00000502612 NOL6Q9H6R4 1146 aaKnown RBP9.29□□□□□ -0.92
NEDD4-203ENST00000502612 ATG3Q9NT62 314 aa9.29□□□□□ -0.92
NEDD4-203ENST00000502612 LRP2BPQ9P2M1 347 aa9.29□□□□□ -0.92
NEDD4-203ENST00000502612 PTCH2Q9Y6C5 1203 aa9.29□□□□□ -0.92
NEDD4-203ENST00000502612 GNAT3A8MTJ3 354 aa9.28□□□□□ -0.92
NEDD4-203ENST00000502612 NMIQ13287 307 aaPredicted RBP9.28□□□□□ -0.92
NEDD4-203ENST00000502612 NKPD1Q17RQ9 610 aa9.28□□□□□ -0.92
NEDD4-203ENST00000502612 CDKAL1Q5VV42 579 aa9.28□□□□□ -0.92
NEDD4-203ENST00000502612 YOD1Q5VVQ6 348 aaPredicted RBP9.28□□□□□ -0.92
NEDD4-203ENST00000502612 FOXB2Q5VYV0 432 aa9.28□□□□□ -0.92
NEDD4-203ENST00000502612 ZDHHC13Q8IUH4 622 aa9.28□□□□□ -0.92
NEDD4-203ENST00000502612 ZNF669Q96BR6 464 aaPredicted RBP9.28□□□□□ -0.92
NEDD4-203ENST00000502612 COX4I2Q96KJ9 171 aa9.28□□□□□ -0.92
NEDD4-203ENST00000502612 ARHGEF4Q9NR80 690 aa9.28□□□□□ -0.92
NEDD4-203ENST00000502612 CGGBP1Q9UFW8 167 aaPredicted RBP9.28□□□□□ -0.92
NEDD4-203ENST00000502612 KCNH3Q9ULD8 1083 aa9.28□□□□□ -0.92
NEDD4-203ENST00000502612 PLAGL2Q9UPG8 496 aa9.28□□□□□ -0.92
NEDD4-203ENST00000502612 PPM1BO75688 479 aa9.27□□□□□ -0.93
NEDD4-203ENST00000502612 NAT2P11245 290 aa9.27□□□□□ -0.93
NEDD4-203ENST00000502612 GRIA2P42262 883 aa9.27□□□□□ -0.93
NEDD4-203ENST00000502612 NOL9Q5SY16 702 aaKnown RBP9.27□□□□□ -0.93
NEDD4-203ENST00000502612 ARHGAP27Q6ZUM4 889 aa9.27□□□□□ -0.93
NEDD4-203ENST00000502612 SPACA3Q8IXA5 215 aa9.27□□□□□ -0.93
NEDD4-203ENST00000502612 FIBCD1Q8N539 461 aa9.27□□□□□ -0.93
NEDD4-203ENST00000502612 JMYQ8N9B5 988 aa9.27□□□□□ -0.93
NEDD4-203ENST00000502612 THAP3Q8WTV1 239 aaPredicted RBP9.27□□□□□ -0.93
NEDD4-203ENST00000502612 ZDHHC15Q96MV8 337 aa9.27□□□□□ -0.93
NEDD4-203ENST00000502612 FANCLQ9NW38 375 aa9.27□□□□□ -0.93
NEDD4-203ENST00000502612 AKT3Q9Y243 479 aa9.27□□□□□ -0.93
NEDD4-203ENST00000502612 PRR19A6NJB7 356 aa9.26□□□□□ -0.93
NEDD4-203ENST00000502612 FAM155AB1AL88 458 aaPredicted RBP9.26□□□□□ -0.93
NEDD4-203ENST00000502612 H0Y8X5 98 aa9.26□□□□□ -0.93
NEDD4-203ENST00000502612 SIGLEC6O43699 453 aa9.26□□□□□ -0.93
NEDD4-203ENST00000502612 CTSKP43235 329 aa9.26□□□□□ -0.93
NEDD4-203ENST00000502612 PPP2R2AP63151 447 aa9.26□□□□□ -0.93
NEDD4-203ENST00000502612 ZNF662Q6ZS27 426 aa9.26□□□□□ -0.93
NEDD4-203ENST00000502612 PLD6Q8N2A8 252 aaKnown RBP9.26□□□□□ -0.93
NEDD4-203ENST00000502612 BVESQ8NE79 360 aa9.26□□□□□ -0.93
NEDD4-203ENST00000502612 MRGPRX3Q96LB0 322 aa9.26□□□□□ -0.93
NEDD4-203ENST00000502612 METTL22Q9BUU2 404 aaPredicted RBP9.26□□□□□ -0.93
NEDD4-203ENST00000502612 DSCC1Q9BVC3 393 aa9.26□□□□□ -0.93
NEDD4-203ENST00000502612 HDAC8Q9BY41 377 aa9.26□□□□□ -0.93
NEDD4-203ENST00000502612 DUSP15Q9H1R2 295 aaPredicted RBP9.26□□□□□ -0.93
NEDD4-203ENST00000502612 EMC9Q9Y3B6 208 aa9.26□□□□□ -0.93
NEDD4-203ENST00000502612 ST14Q9Y5Y6 855 aa9.26□□□□□ -0.93
NEDD4-203ENST00000502612 FHOD1Q9Y613 1164 aa9.26□□□□□ -0.93
NEDD4-203ENST00000502612 H3BS24 57 aa9.25□□□□□ -0.93
NEDD4-203ENST00000502612 CEACAM5P06731 702 aa9.25□□□□□ -0.93
NEDD4-203ENST00000502612 FURINP09958 794 aa9.25□□□□□ -0.93
NEDD4-203ENST00000502612 HOXA10P31260 410 aaPredicted RBP9.25□□□□□ -0.93
NEDD4-203ENST00000502612 CRTC3Q6UUV7 619 aa9.25□□□□□ -0.93
NEDD4-203ENST00000502612 LRRC47Q8N1G4 583 aaKnown RBP9.25□□□□□ -0.93
NEDD4-203ENST00000502612 ARHGEF39Q8N4T4 335 aa9.25□□□□□ -0.93
NEDD4-203ENST00000502612 SYTL5Q8TDW5 730 aaPredicted RBP9.25□□□□□ -0.93
NEDD4-203ENST00000502612 BTN2A2Q8WVV5 523 aa9.25□□□□□ -0.93
NEDD4-203ENST00000502612 CHST7Q9NS84 486 aa9.25□□□□□ -0.93
NEDD4-203ENST00000502612 IQCA1LA6NCM1 817 aa9.24□□□□□ -0.93
NEDD4-203ENST00000502612 AGRPO00253 132 aa9.24□□□□□ -0.93
NEDD4-203ENST00000502612 ENPP3O14638 875 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 384.4 ms