RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 GOLGA8BA8MQT2 603 aa20.48■□□□□ 0.87
CTDSP1-215ENST00000498160 USP17L15C9J2P7 530 aa20.48■□□□□ 0.87
CTDSP1-215ENST00000498160 USP17L13C9JLJ4 530 aa20.48■□□□□ 0.87
CTDSP1-215ENST00000498160 USP17L11C9JVI0 530 aa20.48■□□□□ 0.87
CTDSP1-215ENST00000498160 USP17L18D6R9N7 530 aa20.48■□□□□ 0.87
CTDSP1-215ENST00000498160 USP17L22D6RA61 530 aa20.48■□□□□ 0.87
CTDSP1-215ENST00000498160 USP17L17D6RBQ6 530 aa20.48■□□□□ 0.87
CTDSP1-215ENST00000498160 USP17L19D6RCP7 530 aa20.48■□□□□ 0.87
CTDSP1-215ENST00000498160 USP17L20D6RJB6 530 aa20.48■□□□□ 0.87
CTDSP1-215ENST00000498160 FDX1P10109 184 aa20.48■□□□□ 0.87
CTDSP1-215ENST00000498160 VCAM1P19320 739 aa20.48■□□□□ 0.87
CTDSP1-215ENST00000498160 SMARCA1P28370 1054 aa20.48■□□□□ 0.87
CTDSP1-215ENST00000498160 METAP2P50579 478 aaKnown RBP eCLIP20.48■□□□□ 0.87
CTDSP1-215ENST00000498160 APOBRQ0VD83 1088 aa20.48■□□□□ 0.87
CTDSP1-215ENST00000498160 USP17L24Q0WX57 530 aa20.48■□□□□ 0.87
CTDSP1-215ENST00000498160 GRM4Q14833 912 aa20.48■□□□□ 0.87
CTDSP1-215ENST00000498160 ZYXQ15942 572 aaKnown RBP20.48■□□□□ 0.87
CTDSP1-215ENST00000498160 CCL15Q16663 113 aa20.48■□□□□ 0.87
CTDSP1-215ENST00000498160 CPLX2Q6PUV4 134 aaKnown RBP20.48■□□□□ 0.87
CTDSP1-215ENST00000498160 GADL1Q6ZQY3 521 aa20.48■□□□□ 0.87
CTDSP1-215ENST00000498160 ANKRD23Q86SG2 305 aa20.48■□□□□ 0.87
CTDSP1-215ENST00000498160 SNX21Q969T3 373 aa20.48■□□□□ 0.87
CTDSP1-215ENST00000498160 MS4A4AQ96JQ5 239 aa20.48■□□□□ 0.87
CTDSP1-215ENST00000498160 FEM1BQ9UK73 627 aa20.48■□□□□ 0.87
CTDSP1-215ENST00000498160 GOLGA8AA7E2F4 631 aa20.47■□□□□ 0.87
CTDSP1-215ENST00000498160 HOXA7P31268 230 aaPredicted RBP20.47■□□□□ 0.87
CTDSP1-215ENST00000498160 MAP2K2P36507 400 aa20.47■□□□□ 0.87
CTDSP1-215ENST00000498160 ZNF543Q08ER8 600 aa20.47■□□□□ 0.87
CTDSP1-215ENST00000498160 COL9A3Q14050 684 aaPredicted RBP20.47■□□□□ 0.87
CTDSP1-215ENST00000498160 CCDC96Q2M329 555 aa20.47■□□□□ 0.87
CTDSP1-215ENST00000498160 MICU3Q86XE3 530 aa20.47■□□□□ 0.87
CTDSP1-215ENST00000498160 FANCBQ8NB91 859 aa20.47■□□□□ 0.87
CTDSP1-215ENST00000498160 GTF3C2Q8WUA4 911 aaPredicted RBP20.47■□□□□ 0.87
CTDSP1-215ENST00000498160 NUP133Q8WUM0 1156 aa20.47■□□□□ 0.87
CTDSP1-215ENST00000498160 SLKQ9H2G2 1235 aaPredicted RBP20.47■□□□□ 0.87
CTDSP1-215ENST00000498160 GPHNQ9NQX3 736 aaPredicted RBP20.47■□□□□ 0.87
CTDSP1-215ENST00000498160 NAP1L2Q9ULW6 460 aaPredicted RBP20.47■□□□□ 0.87
CTDSP1-215ENST00000498160 ALDH1A1P00352 501 aa20.46■□□□□ 0.87
CTDSP1-215ENST00000498160 OSBPP22059 807 aa20.46■□□□□ 0.87
CTDSP1-215ENST00000498160 PDIA3P30101 505 aaKnown RBP20.46■□□□□ 0.87
CTDSP1-215ENST00000498160 STAT2P52630 851 aa20.46■□□□□ 0.87
CTDSP1-215ENST00000498160 RTN1Q16799 776 aa20.46■□□□□ 0.87
CTDSP1-215ENST00000498160 SENP2Q9HC62 589 aa20.46■□□□□ 0.87
CTDSP1-215ENST00000498160 PNMA2Q9UL42 364 aa20.46■□□□□ 0.87
CTDSP1-215ENST00000498160 BRPF3Q9ULD4 1205 aa20.46■□□□□ 0.87
CTDSP1-215ENST00000498160 CDKL5O76039 1030 aa20.45■□□□□ 0.86
CTDSP1-215ENST00000498160 CYP4F22Q6NT55 531 aa20.45■□□□□ 0.86
CTDSP1-215ENST00000498160 HSCBQ8IWL3 235 aa20.45■□□□□ 0.86
CTDSP1-215ENST00000498160 TANGO6Q9C0B7 1094 aa20.45■□□□□ 0.86
CTDSP1-215ENST00000498160 RPAP3Q9H6T3 665 aaPredicted RBP20.45■□□□□ 0.86
CTDSP1-215ENST00000498160 RBM27Q9P2N5 1060 aaKnown RBP20.45■□□□□ 0.86
CTDSP1-215ENST00000498160 ISY1Q9ULR0 285 aaKnown RBP20.45■□□□□ 0.86
CTDSP1-215ENST00000498160 PALM3A6NDB9 673 aaPredicted RBP20.44■□□□□ 0.86
CTDSP1-215ENST00000498160 PFKFB2O60825 505 aa20.44■□□□□ 0.86
CTDSP1-215ENST00000498160 TM4SF4P48230 202 aa20.44■□□□□ 0.86
CTDSP1-215ENST00000498160 IRX3P78415 501 aaPredicted RBP20.44■□□□□ 0.86
CTDSP1-215ENST00000498160 FAM83BQ5T0W9 1011 aa20.44■□□□□ 0.86
CTDSP1-215ENST00000498160 BTNL9Q6UXG8 535 aa20.44■□□□□ 0.86
CTDSP1-215ENST00000498160 CATSPERGQ6ZRH7 1159 aa20.44■□□□□ 0.86
CTDSP1-215ENST00000498160 SPICE1Q8N0Z3 855 aa20.44■□□□□ 0.86
CTDSP1-215ENST00000498160 HOXC10Q9NYD6 342 aa20.44■□□□□ 0.86
CTDSP1-215ENST00000498160 TPCN1Q9ULQ1 816 aa20.44■□□□□ 0.86
CTDSP1-215ENST00000498160 WDR33Q9C0J8 1336 aaKnown RBP20.44■□□□□ 0.86
CTDSP1-215ENST00000498160 CPLX1O14810 134 aa20.43■□□□□ 0.86
CTDSP1-215ENST00000498160 MKRN3Q13064 507 aaKnown RBP20.43■□□□□ 0.86
CTDSP1-215ENST00000498160 TRAF1Q13077 416 aa20.43■□□□□ 0.86
CTDSP1-215ENST00000498160 IKQ13123 557 aaPredicted RBP20.43■□□□□ 0.86
CTDSP1-215ENST00000498160 MOGSQ13724 837 aa20.43■□□□□ 0.86
CTDSP1-215ENST00000498160 BECN1Q14457 450 aa20.43■□□□□ 0.86
CTDSP1-215ENST00000498160 PRPF38AQ8NAV1 312 aaKnown RBP20.43■□□□□ 0.86
CTDSP1-215ENST00000498160 BRI3BPQ8WY22 251 aa20.43■□□□□ 0.86
CTDSP1-215ENST00000498160 PARK7Q99497 189 aaKnown RBP20.43■□□□□ 0.86
CTDSP1-215ENST00000498160 MAD2L2Q9UI95 211 aa20.43■□□□□ 0.86
CTDSP1-215ENST00000498160 MTMR7Q9Y216 660 aa20.43■□□□□ 0.86
CTDSP1-215ENST00000498160 THSD7BQ9C0I4 1608 aa20.42■□□□□ 0.86
CTDSP1-215ENST00000498160 TMEM232C9JQI7 657 aa20.42■□□□□ 0.86
CTDSP1-215ENST00000498160 KLRF2D3W0D1 207 aa20.42■□□□□ 0.86
CTDSP1-215ENST00000498160 COG2Q14746 738 aa20.42■□□□□ 0.86
CTDSP1-215ENST00000498160 MB21D1Q8N884 522 aa20.42■□□□□ 0.86
CTDSP1-215ENST00000498160 SLF1Q9BQI6 1058 aa20.42■□□□□ 0.86
CTDSP1-215ENST00000498160 MYL10Q9BUA6 226 aa20.42■□□□□ 0.86
CTDSP1-215ENST00000498160 SPZ1Q9BXG8 430 aa20.42■□□□□ 0.86
CTDSP1-215ENST00000498160 FLOT1O75955 427 aa20.41■□□□□ 0.86
CTDSP1-215ENST00000498160 KIF23Q02241 960 aaPredicted RBP20.41■□□□□ 0.86
CTDSP1-215ENST00000498160 GPAT2Q6NUI2 795 aa20.41■□□□□ 0.86
CTDSP1-215ENST00000498160 LBX2Q6XYB7 198 aa20.41■□□□□ 0.86
CTDSP1-215ENST00000498160 TMTC3Q6ZXV5 915 aa20.41■□□□□ 0.86
CTDSP1-215ENST00000498160 KCTD1Q719H9 257 aa20.41■□□□□ 0.86
CTDSP1-215ENST00000498160 GTF3C6Q969F1 213 aa20.41■□□□□ 0.86
CTDSP1-215ENST00000498160 PPP1R9AQ9ULJ8 1098 aa20.41■□□□□ 0.86
CTDSP1-215ENST00000498160 HPS5Q9UPZ3 1129 aa20.41■□□□□ 0.86
CTDSP1-215ENST00000498160 CTDP1Q9Y5B0 961 aaPredicted RBP20.41■□□□□ 0.86
CTDSP1-215ENST00000498160 BTBD19C9JJ37 291 aa20.4■□□□□ 0.86
CTDSP1-215ENST00000498160 K7ELQ4 463 aaPredicted RBP20.4■□□□□ 0.86
CTDSP1-215ENST00000498160 PDHXO00330 501 aa20.4■□□□□ 0.86
CTDSP1-215ENST00000498160 ANP32AP39687 249 aaKnown RBP20.4■□□□□ 0.86
CTDSP1-215ENST00000498160 VEGFBP49765 207 aa20.4■□□□□ 0.86
CTDSP1-215ENST00000498160 GRM1Q13255 1194 aa20.4■□□□□ 0.86
CTDSP1-215ENST00000498160 ME3Q16798 604 aa20.4■□□□□ 0.86
CTDSP1-215ENST00000498160 KIAA1755Q5JYT7 1200 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms