RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 IRF2BPLQ9H1B7 796 aa7.32□□□□□ -1.24
SMC4-227ENST00000497984 KCNQ5Q9NR82 932 aa7.32□□□□□ -1.24
SMC4-227ENST00000497984 VTI1BQ9UEU0 232 aa7.32□□□□□ -1.24
SMC4-227ENST00000497984 NCANO14594 1321 aa7.31□□□□□ -1.24
SMC4-227ENST00000497984 TEX51A0A1B0GUA7 166 aa7.31□□□□□ -1.24
SMC4-227ENST00000497984 GBP1P32455 592 aa7.31□□□□□ -1.24
SMC4-227ENST00000497984 NLRX1Q86UT6 975 aa7.31□□□□□ -1.24
SMC4-227ENST00000497984 AEBP1Q8IUX7 1158 aa7.31□□□□□ -1.24
SMC4-227ENST00000497984 DAGLBQ8NCG7 672 aa7.31□□□□□ -1.24
SMC4-227ENST00000497984 LRRC3Q9BY71 257 aa7.31□□□□□ -1.24
SMC4-227ENST00000497984 KBTBD4Q9NVX7 518 aa7.31□□□□□ -1.24
SMC4-227ENST00000497984 PRRG2O14669 202 aa7.3□□□□□ -1.24
SMC4-227ENST00000497984 TLR3O15455 904 aaKnown RBP7.3□□□□□ -1.24
SMC4-227ENST00000497984 PDE6BP35913 854 aa7.3□□□□□ -1.24
SMC4-227ENST00000497984 ARSHQ5FYA8 562 aa7.3□□□□□ -1.24
SMC4-227ENST00000497984 FBXL19Q6PCT2 694 aa7.3□□□□□ -1.24
SMC4-227ENST00000497984 TCTN2Q96GX1 697 aa7.3□□□□□ -1.24
SMC4-227ENST00000497984 SGPP1Q9BX95 441 aa7.3□□□□□ -1.24
SMC4-227ENST00000497984 KRTAP9-3Q9BYQ3 159 aa7.3□□□□□ -1.24
SMC4-227ENST00000497984 COPRSQ9NQ92 184 aa7.3□□□□□ -1.24
SMC4-227ENST00000497984 TMEM82A0PJX8 343 aa7.29□□□□□ -1.24
SMC4-227ENST00000497984 GREM1O60565 184 aa7.29□□□□□ -1.24
SMC4-227ENST00000497984 USP2O75604 605 aaPredicted RBP7.29□□□□□ -1.24
SMC4-227ENST00000497984 ATE1O95260 518 aa7.29□□□□□ -1.24
SMC4-227ENST00000497984 RPL10P27635 214 aaKnown RBP7.29□□□□□ -1.24
SMC4-227ENST00000497984 RNF4P78317 190 aa7.29□□□□□ -1.24
SMC4-227ENST00000497984 NBPF12Q5TAG4 269 aaPredicted RBP7.29□□□□□ -1.24
SMC4-227ENST00000497984 TMC3Q7Z5M5 1100 aa7.29□□□□□ -1.24
SMC4-227ENST00000497984 C20orf173Q96LM9 149 aa7.29□□□□□ -1.24
SMC4-227ENST00000497984 FOXP3Q9BZS1 431 aa7.29□□□□□ -1.24
SMC4-227ENST00000497984 BRMS1Q9HCU9 246 aa7.29□□□□□ -1.24
SMC4-227ENST00000497984 MRS2Q9HD23 443 aa7.29□□□□□ -1.24
SMC4-227ENST00000497984 B8ZZF3 427 aa7.28□□□□□ -1.24
SMC4-227ENST00000497984 HOXA5P20719 270 aa7.28□□□□□ -1.24
SMC4-227ENST00000497984 SNW1Q13573 536 aaKnown RBP7.28□□□□□ -1.24
SMC4-227ENST00000497984 CWF19L2Q2TBE0 894 aaKnown RBP7.28□□□□□ -1.24
SMC4-227ENST00000497984 NBPF9Q3BBW0 867 aa7.28□□□□□ -1.24
SMC4-227ENST00000497984 MAP6Q96JE9 813 aa7.28□□□□□ -1.24
SMC4-227ENST00000497984 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.28□□□□□ -1.247e-12■■■■■ 38.5
SMC4-227ENST00000497984 ASCC2Q9H1I8 757 aaPredicted RBP7.28□□□□□ -1.24
SMC4-227ENST00000497984 GMIPQ9P107 970 aa7.28□□□□□ -1.24
SMC4-227ENST00000497984 PCDHB14Q9Y5E9 798 aa7.28□□□□□ -1.24
SMC4-227ENST00000497984 ADAMTS20P59510 1910 aa7.28□□□□□ -1.24
SMC4-227ENST00000497984 ROBO2Q9HCK4 1378 aa7.28□□□□□ -1.24
SMC4-227ENST00000497984 OR14I1A6ND48 311 aa7.27□□□□□ -1.25
SMC4-227ENST00000497984 NRDCO43847 1150 aa7.27□□□□□ -1.25
SMC4-227ENST00000497984 RAG1P15918 1043 aa7.27□□□□□ -1.25
SMC4-227ENST00000497984 POLR2BP30876 1174 aaKnown RBP7.27□□□□□ -1.25
SMC4-227ENST00000497984 KIR2DL1P43626 348 aaPredicted RBP7.27□□□□□ -1.25
SMC4-227ENST00000497984 KIR2DL2P43627 348 aaPredicted RBP7.27□□□□□ -1.25
SMC4-227ENST00000497984 MLECQ14165 292 aa7.27□□□□□ -1.25
SMC4-227ENST00000497984 BBS9Q3SYG4 887 aa7.27□□□□□ -1.25
SMC4-227ENST00000497984 CDCP2Q5VXM1 449 aa7.27□□□□□ -1.25
SMC4-227ENST00000497984 OVOS1Q6IE37 1185 aa7.27□□□□□ -1.25
SMC4-227ENST00000497984 WAPLQ7Z5K2 1190 aa7.27□□□□□ -1.25
SMC4-227ENST00000497984 SIRT2Q8IXJ6 389 aa7.27□□□□□ -1.25
SMC4-227ENST00000497984 ZNF655Q8N720 491 aaPredicted RBP7.27□□□□□ -1.25
SMC4-227ENST00000497984 LINC00116Q8NCU8 138 aa7.27□□□□□ -1.25
SMC4-227ENST00000497984 TCFL5Q9UL49 500 aa7.27□□□□□ -1.25
SMC4-227ENST00000497984 CNOT6Q9ULM6 557 aaKnown RBP7.27□□□□□ -1.25
SMC4-227ENST00000497984 EIF4A3P38919 411 aaKnown RBP7.26□□□□□ -1.25
SMC4-227ENST00000497984 CRKP46108 304 aa7.26□□□□□ -1.25
SMC4-227ENST00000497984 SSPNQ14714 243 aa7.26□□□□□ -1.25
SMC4-227ENST00000497984 ADGRF1Q5T601 910 aa7.26□□□□□ -1.25
SMC4-227ENST00000497984 TMEM132EQ6IEE7 984 aa7.26□□□□□ -1.25
SMC4-227ENST00000497984 ZPBP2Q6X784 338 aa7.26□□□□□ -1.25
SMC4-227ENST00000497984 HHIPL1Q96JK4 782 aa7.26□□□□□ -1.25
SMC4-227ENST00000497984 EHMT1Q9H9B1 1298 aa7.26□□□□□ -1.25
SMC4-227ENST00000497984 CRTAC1Q9NQ79 661 aa7.26□□□□□ -1.25
SMC4-227ENST00000497984 MBD1Q9UIS9 605 aaPredicted RBP7.26□□□□□ -1.25
SMC4-227ENST00000497984 ZMYM5Q9UJ78 669 aa7.26□□□□□ -1.25
SMC4-227ENST00000497984 KCTD3Q9Y597 815 aa7.26□□□□□ -1.25
SMC4-227ENST00000497984 SUPT16HQ9Y5B9 1047 aaKnown RBP7.26□□□□□ -1.25
SMC4-227ENST00000497984 CTSWP56202 376 aa7.25□□□□□ -1.25
SMC4-227ENST00000497984 PCBP3P57721 371 aaKnown RBP7.25□□□□□ -1.25
SMC4-227ENST00000497984 CHMP4BP1P59074 171 aa7.25□□□□□ -1.25
SMC4-227ENST00000497984 CNNM2Q9H8M5 875 aa7.25□□□□□ -1.25
SMC4-227ENST00000497984 HRKO00198 91 aa7.24□□□□□ -1.25
SMC4-227ENST00000497984 PRAMEF1O95521 474 aa7.24□□□□□ -1.25
SMC4-227ENST00000497984 SYPP08247 313 aa7.24□□□□□ -1.25
SMC4-227ENST00000497984 BUD31P41223 144 aaPredicted RBP7.24□□□□□ -1.25
SMC4-227ENST00000497984 ZNF385BQ569K4 471 aa7.24□□□□□ -1.25
SMC4-227ENST00000497984 CEP128Q6ZU80 1094 aa7.24□□□□□ -1.25
SMC4-227ENST00000497984 ATG4CQ96DT6 458 aa7.24□□□□□ -1.25
SMC4-227ENST00000497984 PLCD4Q9BRC7 762 aa7.24□□□□□ -1.25
SMC4-227ENST00000497984 PRDM14Q9GZV8 571 aa7.24□□□□□ -1.25
SMC4-227ENST00000497984 PARD6AQ9NPB6 346 aa7.24□□□□□ -1.25
SMC4-227ENST00000497984 MINPP1Q9UNW1 487 aa7.24□□□□□ -1.25
SMC4-227ENST00000497984 SIGLEC6O43699 453 aa7.23□□□□□ -1.25
SMC4-227ENST00000497984 FKTNO75072 461 aa7.23□□□□□ -1.25
SMC4-227ENST00000497984 ERCC3P19447 782 aa7.23□□□□□ -1.25
SMC4-227ENST00000497984 SRSF3P84103 164 aaKnown RBP7.23□□□□□ -1.25
SMC4-227ENST00000497984 SLC14A2Q15849 920 aa7.23□□□□□ -1.25
SMC4-227ENST00000497984 ZNF296Q8WUU4 475 aaPredicted RBP7.23□□□□□ -1.25
SMC4-227ENST00000497984 KCNC2Q96PR1 638 aa7.23□□□□□ -1.25
SMC4-227ENST00000497984 PNLIPP16233 465 aa7.22□□□□□ -1.25
SMC4-227ENST00000497984 BMP7P18075 431 aa7.22□□□□□ -1.25
SMC4-227ENST00000497984 ITGAEP38570 1179 aa7.22□□□□□ -1.25
SMC4-227ENST00000497984 CEBPAP49715 358 aaPredicted RBP7.22□□□□□ -1.25
SMC4-227ENST00000497984 YBX1P67809 324 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms