RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 TTLL12Q14166 644 aaPredicted RBP28.19■■■□□ 2.1
TNFRSF4-203ENST00000497869 LDLRAD1Q5T700 205 aa28.19■■■□□ 2.1
TNFRSF4-203ENST00000497869 WDR18Q9BV38 432 aa28.19■■■□□ 2.1
TNFRSF4-203ENST00000497869 VCPKMTQ9H867 229 aa28.19■■■□□ 2.1
TNFRSF4-203ENST00000497869 SYT1P21579 422 aa28.18■■■□□ 2.1
TNFRSF4-203ENST00000497869 CST9Q5W186 159 aa28.18■■■□□ 2.1
TNFRSF4-203ENST00000497869 SHISA4Q96DD7 197 aa28.18■■■□□ 2.1
TNFRSF4-203ENST00000497869 GMCL1Q96IK5 515 aa28.18■■■□□ 2.1
TNFRSF4-203ENST00000497869 HMGN5P82970 282 aaKnown RBP28.18■■■□□ 2.1
TNFRSF4-203ENST00000497869 PKN1Q16512 942 aa28.18■■■□□ 2.1
TNFRSF4-203ENST00000497869 KIAA1683Q9H0B3 1180 aa28.18■■■□□ 2.1
TNFRSF4-203ENST00000497869 V9GY48 417 aaPredicted RBP28.18■■■□□ 2.1
TNFRSF4-203ENST00000497869 CDKL5O76039 1030 aa28.17■■■□□ 2.1
TNFRSF4-203ENST00000497869 SLC1A4P43007 532 aa28.17■■■□□ 2.1
TNFRSF4-203ENST00000497869 FOSBP53539 338 aa28.17■■■□□ 2.1
TNFRSF4-203ENST00000497869 MTMR2Q13614 643 aa28.17■■■□□ 2.1
TNFRSF4-203ENST00000497869 ASPRV1Q53RT3 343 aa28.17■■■□□ 2.1
TNFRSF4-203ENST00000497869 CPLX2Q6PUV4 134 aaKnown RBP28.17■■■□□ 2.1
TNFRSF4-203ENST00000497869 ZNF280CQ8ND82 737 aa28.17■■■□□ 2.1
TNFRSF4-203ENST00000497869 DCAF4Q8WV16 495 aa28.17■■■□□ 2.1
TNFRSF4-203ENST00000497869 ELP3Q9H9T3 547 aa28.17■■■□□ 2.1
TNFRSF4-203ENST00000497869 EMILIN3Q9NT22 766 aa28.17■■■□□ 2.1
TNFRSF4-203ENST00000497869 AFG3L2Q9Y4W6 797 aa28.17■■■□□ 2.1
TNFRSF4-203ENST00000497869 STK36Q9NRP7 1315 aa28.17■■■□□ 2.1
TNFRSF4-203ENST00000497869 SLC16A2P36021 539 aa28.16■■■□□ 2.1
TNFRSF4-203ENST00000497869 SSRP1Q08945 709 aaKnown RBP28.16■■■□□ 2.1
TNFRSF4-203ENST00000497869 CCDC96Q2M329 555 aa28.16■■■□□ 2.1
TNFRSF4-203ENST00000497869 ANKRD13AQ8IZ07 590 aa28.16■■■□□ 2.1
TNFRSF4-203ENST00000497869 PIBF1Q8WXW3 757 aa28.16■■■□□ 2.1
TNFRSF4-203ENST00000497869 TRIM75PA6NK02 468 aa28.15■■■□□ 2.1
TNFRSF4-203ENST00000497869 CELF2O95319 508 aaKnown RBP28.15■■■□□ 2.1
TNFRSF4-203ENST00000497869 PHIPQ8WWQ0 1821 aa28.15■■■□□ 2.1
TNFRSF4-203ENST00000497869 PRPF3O43395 683 aaKnown RBP28.15■■■□□ 2.1
TNFRSF4-203ENST00000497869 GNAQP50148 359 aa28.15■■■□□ 2.1
TNFRSF4-203ENST00000497869 OTUD7BQ6GQQ9 843 aa28.15■■■□□ 2.1
TNFRSF4-203ENST00000497869 ARMC9Q7Z3E5 817 aa28.15■■■□□ 2.1
TNFRSF4-203ENST00000497869 FEZ1Q99689 392 aa28.15■■■□□ 2.1
TNFRSF4-203ENST00000497869 RNF26Q9BY78 433 aaPredicted RBP28.15■■■□□ 2.1
TNFRSF4-203ENST00000497869 CHMP5Q9NZZ3 219 aa28.15■■■□□ 2.1
TNFRSF4-203ENST00000497869 CSADQ9Y600 493 aa28.15■■■□□ 2.1
TNFRSF4-203ENST00000497869 USP17L10C9JJH3 530 aa28.14■■■□□ 2.1
TNFRSF4-203ENST00000497869 BACE1P56817 501 aa28.14■■■□□ 2.1
TNFRSF4-203ENST00000497869 FAM83BQ5T0W9 1011 aa28.14■■■□□ 2.1
TNFRSF4-203ENST00000497869 LARP1BQ659C4 914 aaKnown RBP28.14■■■□□ 2.1
TNFRSF4-203ENST00000497869 SPZ1Q9BXG8 430 aa28.14■■■□□ 2.1
TNFRSF4-203ENST00000497869 RIOX1Q9H6W3 641 aa28.14■■■□□ 2.1
TNFRSF4-203ENST00000497869 GOPCQ9HD26 462 aa28.14■■■□□ 2.1
TNFRSF4-203ENST00000497869 BMP3P12645 472 aa28.13■■■□□ 2.09
TNFRSF4-203ENST00000497869 GPATCH4Q5T3I0 446 aaKnown RBP28.13■■■□□ 2.09
TNFRSF4-203ENST00000497869 FAM184AQ8NB25 1140 aa28.13■■■□□ 2.09
TNFRSF4-203ENST00000497869 GBA2Q9HCG7 927 aaPredicted RBP28.13■■■□□ 2.09
TNFRSF4-203ENST00000497869 CIZ1Q9ULV3 898 aaPredicted RBP28.13■■■□□ 2.09
TNFRSF4-203ENST00000497869 MTMR6Q9Y217 621 aa28.13■■■□□ 2.09
TNFRSF4-203ENST00000497869 SH2D4AQ9H788 454 aa28.12■■■□□ 2.09
TNFRSF4-203ENST00000497869 VAT1LQ9HCJ6 419 aa28.12■■■□□ 2.09
TNFRSF4-203ENST00000497869 BRD1O95696 1058 aa28.12■■■□□ 2.09
TNFRSF4-203ENST00000497869 GJA5P36382 358 aa28.12■■■□□ 2.09
TNFRSF4-203ENST00000497869 LZTS2Q9BRK4 669 aa28.12■■■□□ 2.09
TNFRSF4-203ENST00000497869 ALG1Q9BT22 464 aa28.12■■■□□ 2.09
TNFRSF4-203ENST00000497869 JMJD4Q9H9V9 463 aa28.12■■■□□ 2.09
TNFRSF4-203ENST00000497869 AS3MTQ9HBK9 375 aa28.12■■■□□ 2.09
TNFRSF4-203ENST00000497869 BAZ2BQ9UIF8 2168 aaKnown RBP28.11■■■□□ 2.09
TNFRSF4-203ENST00000497869 SPDYE5A6NIY4 337 aa28.11■■■□□ 2.09
TNFRSF4-203ENST00000497869 STX6O43752 255 aa28.11■■■□□ 2.09
TNFRSF4-203ENST00000497869 GUCY1B3Q02153 619 aa28.11■■■□□ 2.09
TNFRSF4-203ENST00000497869 FOXD4L5Q5VV16 416 aaPredicted RBP28.11■■■□□ 2.09
TNFRSF4-203ENST00000497869 TRIM22Q8IYM9 498 aa28.11■■■□□ 2.09
TNFRSF4-203ENST00000497869 ADGRF4Q8IZF3 695 aa28.11■■■□□ 2.09
TNFRSF4-203ENST00000497869 FOXD4L4Q8WXT5 416 aaPredicted RBP28.11■■■□□ 2.09
TNFRSF4-203ENST00000497869 TMEM232C9JQI7 657 aa28.1■■■□□ 2.09
TNFRSF4-203ENST00000497869 IRF6O14896 467 aa28.1■■■□□ 2.09
TNFRSF4-203ENST00000497869 DEXIO95424 95 aa28.1■■■□□ 2.09
TNFRSF4-203ENST00000497869 SMARCA1P28370 1054 aa28.1■■■□□ 2.09
TNFRSF4-203ENST00000497869 HMGCS2P54868 508 aa28.1■■■□□ 2.09
TNFRSF4-203ENST00000497869 OTUD5Q96G74 571 aa28.1■■■□□ 2.09
TNFRSF4-203ENST00000497869 PIGSQ96S52 555 aa28.1■■■□□ 2.09
TNFRSF4-203ENST00000497869 PASKQ96RG2 1323 aa28.1■■■□□ 2.09
TNFRSF4-203ENST00000497869 VCAM1P19320 739 aa28.09■■■□□ 2.09
TNFRSF4-203ENST00000497869 ERO1BQ86YB8 467 aa28.09■■■□□ 2.09
TNFRSF4-203ENST00000497869 FBXO28Q9NVF7 368 aa28.09■■■□□ 2.09
TNFRSF4-203ENST00000497869 ISY1Q9ULR0 285 aaKnown RBP28.09■■■□□ 2.09
TNFRSF4-203ENST00000497869 PPATQ06203 517 aa28.09■■■□□ 2.09
TNFRSF4-203ENST00000497869 BTNL9Q6UXG8 535 aa28.09■■■□□ 2.09
TNFRSF4-203ENST00000497869 MTMR8Q96EF0 704 aa28.09■■■□□ 2.09
TNFRSF4-203ENST00000497869 SNAP25P60880 206 aa28.08■■■□□ 2.09
TNFRSF4-203ENST00000497869 FKBP1BP68106 108 aa28.08■■■□□ 2.09
TNFRSF4-203ENST00000497869 PFKFB3Q16875 520 aaPredicted RBP28.08■■■□□ 2.09
TNFRSF4-203ENST00000497869 TYW1BQ6NUM6 668 aa28.08■■■□□ 2.09
TNFRSF4-203ENST00000497869 C12orf42Q96LP6 360 aa28.08■■■□□ 2.09
TNFRSF4-203ENST00000497869 PPP1R11O60927 126 aaPredicted RBP28.07■■■□□ 2.08
TNFRSF4-203ENST00000497869 HOMER1Q86YM7 354 aa28.07■■■□□ 2.08
TNFRSF4-203ENST00000497869 LPAR1Q92633 364 aa28.07■■■□□ 2.08
TNFRSF4-203ENST00000497869 OPTNQ96CV9 577 aa28.07■■■□□ 2.08
TNFRSF4-203ENST00000497869 VPS37CA5D8V6 355 aaPredicted RBP28.06■■■□□ 2.08
TNFRSF4-203ENST00000497869 SH3D19Q5HYK7 790 aa28.06■■■□□ 2.08
TNFRSF4-203ENST00000497869 FBXO18Q8NFZ0 1043 aa28.06■■■□□ 2.08
TNFRSF4-203ENST00000497869 GPKOWQ92917 476 aaPredicted RBP eCLIP28.06■■■□□ 2.08
TNFRSF4-203ENST00000497869 CHAMP1Q96JM3 812 aa28.06■■■□□ 2.08
TNFRSF4-203ENST00000497869 C8orf76Q96K31 380 aa28.06■■■□□ 2.08
TNFRSF4-203ENST00000497869 VPS54Q9P1Q0 977 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms