RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 MTMR6Q9Y217 621 aa23.08■■□□□ 1.29
ACTN4-208ENST00000497637 SUGT1Q9Y2Z0 365 aa23.08■■□□□ 1.29
ACTN4-208ENST00000497637 LAMA2P24043 3122 aaKnown RBP23.07■■□□□ 1.28
ACTN4-208ENST00000497637 TRAK2O60296 914 aa23.07■■□□□ 1.28
ACTN4-208ENST00000497637 BAG3O95817 575 aa23.07■■□□□ 1.28
ACTN4-208ENST00000497637 HMGCRP04035 888 aa23.07■■□□□ 1.28
ACTN4-208ENST00000497637 FGRP09769 529 aa23.07■■□□□ 1.28
ACTN4-208ENST00000497637 SKOR2Q2VWA4 1001 aaPredicted RBP23.07■■□□□ 1.28
ACTN4-208ENST00000497637 LARP1BQ659C4 914 aaKnown RBP23.07■■□□□ 1.28
ACTN4-208ENST00000497637 SLF2Q8IX21 1173 aa23.07■■□□□ 1.28
ACTN4-208ENST00000497637 IGDCC4Q8TDY8 1250 aa23.07■■□□□ 1.28
ACTN4-208ENST00000497637 FAM151AQ8WW52 585 aa23.07■■□□□ 1.28
ACTN4-208ENST00000497637 HMX1Q9NP08 348 aaPredicted RBP23.07■■□□□ 1.28
ACTN4-208ENST00000497637 DCP1AQ9NPI6 582 aaPredicted RBP23.07■■□□□ 1.28
ACTN4-208ENST00000497637 BRPF3Q9ULD4 1205 aa23.07■■□□□ 1.28
ACTN4-208ENST00000497637 SPTBN5Q9NRC6 3674 aaKnown RBP23.07■■□□□ 1.28
ACTN4-208ENST00000497637 KLF18A0A0U1RQI7 1052 aa23.06■■□□□ 1.28
ACTN4-208ENST00000497637 HMGN5P82970 282 aaKnown RBP23.06■■□□□ 1.28
ACTN4-208ENST00000497637 FOXD4L5Q5VV16 416 aaPredicted RBP23.06■■□□□ 1.28
ACTN4-208ENST00000497637 CTR9Q6PD62 1173 aa23.06■■□□□ 1.28
ACTN4-208ENST00000497637 FOXD4L4Q8WXT5 416 aaPredicted RBP23.06■■□□□ 1.28
ACTN4-208ENST00000497637 NOL10Q9BSC4 688 aaKnown RBP23.06■■□□□ 1.28
ACTN4-208ENST00000497637 INCENPQ9NQS7 918 aa23.06■■□□□ 1.28
ACTN4-208ENST00000497637 ZSWIM5Q9P217 1185 aa23.06■■□□□ 1.28
ACTN4-208ENST00000497637 ALPK3Q96L96 1907 aa23.06■■□□□ 1.28
ACTN4-208ENST00000497637 MROH7-TTC4A0A0A0MT08 1334 aa23.06■■□□□ 1.28
ACTN4-208ENST00000497637 A0A0G2JLL6 359 aaPredicted RBP23.05■■□□□ 1.28
ACTN4-208ENST00000497637 MINDY4BA8MYZ0 360 aa23.05■■□□□ 1.28
ACTN4-208ENST00000497637 MCTP1Q6DN14 999 aa23.05■■□□□ 1.28
ACTN4-208ENST00000497637 HHIPL2Q6UWX4 724 aa23.05■■□□□ 1.28
ACTN4-208ENST00000497637 PRRT2Q7Z6L0 340 aaPredicted RBP23.05■■□□□ 1.28
ACTN4-208ENST00000497637 NSUN7Q8NE18 718 aaKnown RBP23.05■■□□□ 1.28
ACTN4-208ENST00000497637 MGAMO43451 1857 aa23.05■■□□□ 1.28
ACTN4-208ENST00000497637 GPR75-ASB3A0A0A6YYF3 556 aa23.04■■□□□ 1.28
ACTN4-208ENST00000497637 USP17L12C9JPN9 530 aa23.04■■□□□ 1.28
ACTN4-208ENST00000497637 USP17L21D6R901 530 aa23.04■■□□□ 1.28
ACTN4-208ENST00000497637 JAK2O60674 1132 aa23.04■■□□□ 1.28
ACTN4-208ENST00000497637 KDM4AO75164 1064 aa23.04■■□□□ 1.28
ACTN4-208ENST00000497637 CTDNEP1O95476 244 aa23.04■■□□□ 1.28
ACTN4-208ENST00000497637 F13A1P00488 732 aa23.04■■□□□ 1.28
ACTN4-208ENST00000497637 LIFRP42702 1097 aa23.04■■□□□ 1.28
ACTN4-208ENST00000497637 ZNF697Q5TEC3 545 aa23.04■■□□□ 1.28
ACTN4-208ENST00000497637 SGMS1Q86VZ5 419 aa23.04■■□□□ 1.28
ACTN4-208ENST00000497637 OGDHLQ9ULD0 1010 aa23.04■■□□□ 1.28
ACTN4-208ENST00000497637 CCT2P78371 535 aaKnown RBP23.03■■□□□ 1.28
ACTN4-208ENST00000497637 DIXDC1Q155Q3 683 aa23.03■■□□□ 1.28
ACTN4-208ENST00000497637 TMEM67Q5HYA8 995 aa23.03■■□□□ 1.28
ACTN4-208ENST00000497637 LY9Q9HBG7 655 aa23.03■■□□□ 1.28
ACTN4-208ENST00000497637 PICK1Q9NRD5 415 aa23.03■■□□□ 1.28
ACTN4-208ENST00000497637 ARPP21Q9UBL0 812 aaPredicted RBP23.03■■□□□ 1.28
ACTN4-208ENST00000497637 NAP1L2Q9ULW6 460 aaPredicted RBP23.03■■□□□ 1.28
ACTN4-208ENST00000497637 KIF3AQ9Y496 699 aa23.03■■□□□ 1.28
ACTN4-208ENST00000497637 ATP6V1DQ9Y5K8 247 aa23.03■■□□□ 1.28
ACTN4-208ENST00000497637 ZHX2Q9Y6X8 837 aa23.03■■□□□ 1.28
ACTN4-208ENST00000497637 GAKO14976 1311 aa23.03■■□□□ 1.28
ACTN4-208ENST00000497637 PRUNE2Q8WUY3 3088 aa23.02■■□□□ 1.28
ACTN4-208ENST00000497637 IFIT3O14879 490 aaKnown RBP23.02■■□□□ 1.28
ACTN4-208ENST00000497637 DHX16O60231 1041 aaKnown RBP23.02■■□□□ 1.28
ACTN4-208ENST00000497637 PLCG2P16885 1265 aa23.02■■□□□ 1.28
ACTN4-208ENST00000497637 COL9A1P20849 921 aa23.02■■□□□ 1.28
ACTN4-208ENST00000497637 MAFAQ8NHW3 353 aaPredicted RBP23.02■■□□□ 1.28
ACTN4-208ENST00000497637 ESR2Q92731 530 aa23.02■■□□□ 1.28
ACTN4-208ENST00000497637 LMBRD1Q9NUN5 540 aa23.02■■□□□ 1.28
ACTN4-208ENST00000497637 PTPDC1A2A3K4 754 aa23.01■■□□□ 1.27
ACTN4-208ENST00000497637 GOLGA8BA8MQT2 603 aa23.01■■□□□ 1.27
ACTN4-208ENST00000497637 ORC4O43929 436 aa23.01■■□□□ 1.27
ACTN4-208ENST00000497637 SLC3A2P08195 630 aaKnown RBP23.01■■□□□ 1.27
ACTN4-208ENST00000497637 NT5C2P49902 561 aa23.01■■□□□ 1.27
ACTN4-208ENST00000497637 FAM110CQ1W6H9 321 aa23.01■■□□□ 1.27
ACTN4-208ENST00000497637 RRP12Q5JTH9 1297 aaKnown RBP23.01■■□□□ 1.27
ACTN4-208ENST00000497637 GADL1Q6ZQY3 521 aa23.01■■□□□ 1.27
ACTN4-208ENST00000497637 TMTC2Q8N394 836 aa23.01■■□□□ 1.27
ACTN4-208ENST00000497637 SH3RF3Q8TEJ3 882 aaPredicted RBP23.01■■□□□ 1.27
ACTN4-208ENST00000497637 FAM161BQ96MY7 647 aa23.01■■□□□ 1.27
ACTN4-208ENST00000497637 NCOA5Q9HCD5 579 aaKnown RBP23.01■■□□□ 1.27
ACTN4-208ENST00000497637 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.01■■□□□ 1.27
ACTN4-208ENST00000497637 CYP2D7A0A087X1C5 515 aa23■■□□□ 1.27
ACTN4-208ENST00000497637 DTNBO60941 627 aa23■■□□□ 1.27
ACTN4-208ENST00000497637 BTDP43251 543 aa23■■□□□ 1.27
ACTN4-208ENST00000497637 USP5P45974 858 aa23■■□□□ 1.27
ACTN4-208ENST00000497637 SART3Q15020 963 aaKnown RBP23■■□□□ 1.27
ACTN4-208ENST00000497637 ANKRD13CQ8N6S4 541 aa23■■□□□ 1.27
ACTN4-208ENST00000497637 TOMM22Q9NS69 142 aa23■■□□□ 1.27
ACTN4-208ENST00000497637 EYSQ5T1H1 3165 aa22.99■■□□□ 1.27
ACTN4-208ENST00000497637 SCYL3Q8IZE3 742 aa22.99■■□□□ 1.27
ACTN4-208ENST00000497637 FAM184AQ8NB25 1140 aa22.99■■□□□ 1.27
ACTN4-208ENST00000497637 CDX2Q99626 313 aaPredicted RBP22.99■■□□□ 1.27
ACTN4-208ENST00000497637 LBHD1Q9BQE6 289 aaPredicted RBP22.99■■□□□ 1.27
ACTN4-208ENST00000497637 PNMA3Q9UL41 463 aa22.99■■□□□ 1.27
ACTN4-208ENST00000497637 AFG3L2Q9Y4W6 797 aa22.99■■□□□ 1.27
ACTN4-208ENST00000497637 VPS37CA5D8V6 355 aaPredicted RBP22.98■■□□□ 1.27
ACTN4-208ENST00000497637 PTPRAP18433 802 aa22.98■■□□□ 1.27
ACTN4-208ENST00000497637 MDM2Q00987 491 aaPredicted RBP22.98■■□□□ 1.27
ACTN4-208ENST00000497637 C12orf60Q5U649 245 aa22.98■■□□□ 1.27
ACTN4-208ENST00000497637 APOA5Q6Q788 366 aa22.98■■□□□ 1.27
ACTN4-208ENST00000497637 NFXL1Q6ZNB6 911 aa22.98■■□□□ 1.27
ACTN4-208ENST00000497637 DDX11Q96FC9 970 aa22.98■■□□□ 1.27
ACTN4-208ENST00000497637 SENP2Q9HC62 589 aa22.98■■□□□ 1.27
ACTN4-208ENST00000497637 COL2A1P02458 1487 aaPredicted RBP22.98■■□□□ 1.27
ACTN4-208ENST00000497637 ERICH2A1L162 156 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms