RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 HHIPL2Q6UWX4 724 aa13.2□□□□□ -0.3
SNRNP200-208ENST00000497539 TEX11Q8IYF3 940 aa13.2□□□□□ -0.3
SNRNP200-208ENST00000497539 TGFBRAP1Q8WUH2 860 aa13.2□□□□□ -0.3
SNRNP200-208ENST00000497539 SLX4Q8IY92 1834 aa13.2□□□□□ -0.3
SNRNP200-208ENST00000497539 ADAMTSL1Q8N6G6 1762 aa13.2□□□□□ -0.3
SNRNP200-208ENST00000497539 WDHD1O75717 1129 aaPredicted RBP13.19□□□□□ -0.3
SNRNP200-208ENST00000497539 NDUFA8P51970 172 aa13.19□□□□□ -0.3
SNRNP200-208ENST00000497539 TFAP4Q01664 338 aa13.19□□□□□ -0.3
SNRNP200-208ENST00000497539 AKAP17AQ02040 695 aaKnown RBP13.19□□□□□ -0.3
SNRNP200-208ENST00000497539 GNL2Q13823 731 aaKnown RBP13.19□□□□□ -0.3
SNRNP200-208ENST00000497539 IQCB1Q15051 598 aa13.19□□□□□ -0.3
SNRNP200-208ENST00000497539 ZKSCAN8Q15776 578 aaPredicted RBP13.19□□□□□ -0.3
SNRNP200-208ENST00000497539 DPP8Q6V1X1 898 aaPredicted RBP13.19□□□□□ -0.3
SNRNP200-208ENST00000497539 NEDD1Q8NHV4 660 aa13.19□□□□□ -0.3
SNRNP200-208ENST00000497539 SGSM3Q96HU1 749 aa13.19□□□□□ -0.3
SNRNP200-208ENST00000497539 LZTS2Q9BRK4 669 aa13.19□□□□□ -0.3
SNRNP200-208ENST00000497539 PAXBP1Q9Y5B6 917 aa13.19□□□□□ -0.3
SNRNP200-208ENST00000497539 BTBD18B2RXH4 712 aa13.19□□□□□ -0.3
SNRNP200-208ENST00000497539 SMARCA1P28370 1054 aa13.19□□□□□ -0.3
SNRNP200-208ENST00000497539 NPY5RQ15761 445 aa13.19□□□□□ -0.3
SNRNP200-208ENST00000497539 PFKFB3Q16875 520 aaPredicted RBP13.19□□□□□ -0.3
SNRNP200-208ENST00000497539 FAM47AQ5JRC9 791 aa13.19□□□□□ -0.3
SNRNP200-208ENST00000497539 STK11IPQ8N1F8 1099 aa13.19□□□□□ -0.3
SNRNP200-208ENST00000497539 SRBD1Q8N5C6 995 aaKnown RBP13.19□□□□□ -0.3
SNRNP200-208ENST00000497539 DDX41Q9UJV9 622 aaKnown RBP13.19□□□□□ -0.3
SNRNP200-208ENST00000497539 CEP131Q9UPN4 1083 aa13.19□□□□□ -0.3
SNRNP200-208ENST00000497539 MYH8P13535 1937 aa13.19□□□□□ -0.3
SNRNP200-208ENST00000497539 KIF1CO43896 1103 aaKnown RBP13.18□□□□□ -0.3
SNRNP200-208ENST00000497539 BMP15O95972 392 aa13.18□□□□□ -0.3
SNRNP200-208ENST00000497539 KRT2P35908 639 aa13.18□□□□□ -0.3
SNRNP200-208ENST00000497539 HDLBPQ00341 1268 aaKnown RBP13.18□□□□□ -0.3
SNRNP200-208ENST00000497539 PODNQ7Z5L7 613 aa13.18□□□□□ -0.3
SNRNP200-208ENST00000497539 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.18□□□□□ -0.3
SNRNP200-208ENST00000497539 BPIFA3Q9BQP9 254 aa13.18□□□□□ -0.3
SNRNP200-208ENST00000497539 ZC3H12CQ9C0D7 883 aaKnown RBP13.18□□□□□ -0.3
SNRNP200-208ENST00000497539 KAT14Q9H8E8 782 aa13.18□□□□□ -0.3
SNRNP200-208ENST00000497539 RGS17Q9UGC6 210 aaPredicted RBP13.18□□□□□ -0.3
SNRNP200-208ENST00000497539 SIPA1L1O43166 1804 aa13.18□□□□□ -0.3
SNRNP200-208ENST00000497539 BECN2A8MW95 431 aa13.18□□□□□ -0.3
SNRNP200-208ENST00000497539 NMT2O60551 498 aa13.18□□□□□ -0.3
SNRNP200-208ENST00000497539 PFKFB1P16118 471 aa13.18□□□□□ -0.3
SNRNP200-208ENST00000497539 PTPN14Q15678 1187 aa13.18□□□□□ -0.3
SNRNP200-208ENST00000497539 SLC15A2Q16348 729 aa13.18□□□□□ -0.3
SNRNP200-208ENST00000497539 KMT5BQ4FZB7 885 aa13.18□□□□□ -0.3
SNRNP200-208ENST00000497539 CERS5Q8N5B7 392 aa13.18□□□□□ -0.3
SNRNP200-208ENST00000497539 KIF18AQ8NI77 898 aa13.18□□□□□ -0.3
SNRNP200-208ENST00000497539 COL2A1P02458 1487 aaPredicted RBP13.18□□□□□ -0.3
SNRNP200-208ENST00000497539 NPM3O75607 178 aaKnown RBP13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 PTPREP23469 700 aa13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 GUCY2CP25092 1073 aa13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 SSR1P43307 286 aaKnown RBP13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 CDK8P49336 464 aa13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 PLCD1P51178 756 aa13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 GTF2IP78347 998 aa13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 GABPAQ06546 454 aa13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 SHC4Q6S5L8 630 aa13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 MAPKAPK5Q8IW41 473 aa13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 KRI1Q8N9T8 703 aaKnown RBP13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 DYNLL2Q96FJ2 89 aa13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 ST7Q9NRC1 585 aa13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 ANO10Q9NW15 660 aa13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 FBXO2Q9UK22 296 aaPredicted RBP13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 KCNJ14Q9UNX9 436 aa13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 SCG2P13521 617 aa13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 TRAPPC10P48553 1259 aa13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 ELF2Q15723 593 aa13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 SARM1Q6SZW1 724 aa13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 C2CD5Q86YS7 1000 aa13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 DAGLBQ8NCG7 672 aa13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 PNMA1Q8ND90 353 aa13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 C7orf43Q8WVR3 580 aa13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 BORCS6Q96GS4 357 aa13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 TMX4Q9H1E5 349 aaPredicted RBP13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 MKNK2Q9HBH9 465 aa13.17□□□□□ -0.3
SNRNP200-208ENST00000497539 A0A1B0GVL5 298 aa13.16□□□□□ -0.3
SNRNP200-208ENST00000497539 PALM3A6NDB9 673 aaPredicted RBP13.16□□□□□ -0.3
SNRNP200-208ENST00000497539 ZNF202O95125 648 aa13.16□□□□□ -0.3
SNRNP200-208ENST00000497539 TSPY3P0CV98 308 aa13.16□□□□□ -0.3
SNRNP200-208ENST00000497539 TSPY8P0CW00 308 aa13.16□□□□□ -0.3
SNRNP200-208ENST00000497539 ICE2Q659A1 982 aa13.16□□□□□ -0.3
SNRNP200-208ENST00000497539 ZNF444Q8N0Y2 327 aaPredicted RBP13.16□□□□□ -0.3
SNRNP200-208ENST00000497539 CNKSR1Q969H4 720 aa13.16□□□□□ -0.3
SNRNP200-208ENST00000497539 MAD2L2Q9UI95 211 aa13.16□□□□□ -0.3
SNRNP200-208ENST00000497539 V9GY48 417 aaPredicted RBP13.16□□□□□ -0.3
SNRNP200-208ENST00000497539 IGKV6D-41A0A0C4DH26 115 aa13.16□□□□□ -0.3
SNRNP200-208ENST00000497539 H0YIN7 160 aa13.16□□□□□ -0.3
SNRNP200-208ENST00000497539 GALNT17Q6IS24 598 aa13.16□□□□□ -0.3
SNRNP200-208ENST00000497539 CMTR1Q8N1G2 835 aaKnown RBP13.16□□□□□ -0.3
SNRNP200-208ENST00000497539 KIAA1468Q9P260 1216 aa13.16□□□□□ -0.3
SNRNP200-208ENST00000497539 TUBE1Q9UJT0 475 aa13.16□□□□□ -0.3
SNRNP200-208ENST00000497539 SRPRBQ9Y5M8 271 aaKnown RBP13.16□□□□□ -0.3
SNRNP200-208ENST00000497539 TNNT3P45378 269 aaPredicted RBP13.16□□□□□ -0.3
SNRNP200-208ENST00000497539 OXER1Q8TDS5 423 aa13.16□□□□□ -0.3
SNRNP200-208ENST00000497539 SPZ1Q9BXG8 430 aa13.16□□□□□ -0.3
SNRNP200-208ENST00000497539 EHD4Q9H223 541 aa13.16□□□□□ -0.3
SNRNP200-208ENST00000497539 STK32BQ9NY57 414 aa13.16□□□□□ -0.3
SNRNP200-208ENST00000497539 SWAP70Q9UH65 585 aa13.16□□□□□ -0.3
SNRNP200-208ENST00000497539 SCN9AQ15858 1988 aa13.15□□□□□ -0.3
SNRNP200-208ENST00000497539 CALML3P27482 149 aa13.15□□□□□ -0.3
SNRNP200-208ENST00000497539 CDC25BP30305 580 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms