RNA–Protein interactions for RNA: ENST00000497390.5

PCBP4-216, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-216ENST00000497390 PUF60Q9UHX1 559 aaKnown RBP18.52■□□□□ 0.55
PCBP4-216ENST00000497390 KDM4FA0A1W2PPD8 638 aa18.51■□□□□ 0.55
PCBP4-216ENST00000497390 NUTM2BA6NNL0 878 aaPredicted RBP18.51■□□□□ 0.55
PCBP4-216ENST00000497390 NUTM2EB1AL46 878 aaPredicted RBP18.51■□□□□ 0.55
PCBP4-216ENST00000497390 MFAP3LO75121 409 aa18.51■□□□□ 0.55
PCBP4-216ENST00000497390 KIF20AO95235 890 aa18.51■□□□□ 0.55
PCBP4-216ENST00000497390 BMS1Q14692 1282 aaKnown RBP18.51■□□□□ 0.55
PCBP4-216ENST00000497390 FBXO33Q7Z6M2 555 aa18.51■□□□□ 0.55
PCBP4-216ENST00000497390 FERMT2Q96AC1 680 aa18.51■□□□□ 0.55
PCBP4-216ENST00000497390 TFR2Q9UP52 801 aa18.51■□□□□ 0.55
PCBP4-216ENST00000497390 RREB1Q92766 1687 aa18.51■□□□□ 0.55
PCBP4-216ENST00000497390 POLR3GO15318 223 aaPredicted RBP18.51■□□□□ 0.55
PCBP4-216ENST00000497390 TUBB4AP04350 444 aa18.51■□□□□ 0.55
PCBP4-216ENST00000497390 PMS1P54277 932 aaKnown RBP18.51■□□□□ 0.55
PCBP4-216ENST00000497390 SF3B3Q15393 1217 aaKnown RBP18.51■□□□□ 0.55
PCBP4-216ENST00000497390 TMCO3Q6UWJ1 677 aa18.51■□□□□ 0.55
PCBP4-216ENST00000497390 RSRC2Q7L4I2 434 aaKnown RBP18.51■□□□□ 0.55
PCBP4-216ENST00000497390 SLC44A5Q8NCS7 719 aa18.51■□□□□ 0.55
PCBP4-216ENST00000497390 CTCFLQ8NI51 663 aaPredicted RBP18.51■□□□□ 0.55
PCBP4-216ENST00000497390 GPR101Q96P66 508 aaPredicted RBP18.51■□□□□ 0.55
PCBP4-216ENST00000497390 GSDMAQ96QA5 445 aa18.51■□□□□ 0.55
PCBP4-216ENST00000497390 PARD6BQ9BYG5 372 aa18.51■□□□□ 0.55
PCBP4-216ENST00000497390 RBM28Q9NW13 759 aaKnown RBP18.51■□□□□ 0.55
PCBP4-216ENST00000497390 TSPY2A6NKD2 308 aa18.5■□□□□ 0.55
PCBP4-216ENST00000497390 TBC1D8O95759 1140 aa18.5■□□□□ 0.55
PCBP4-216ENST00000497390 PPFIBP1Q86W92 1011 aa18.5■□□□□ 0.55
PCBP4-216ENST00000497390 ROBO1Q9Y6N7 1651 aa18.5■□□□□ 0.55
PCBP4-216ENST00000497390 USP17L3A6NCW0 530 aa18.5■□□□□ 0.55
PCBP4-216ENST00000497390 USP17L4A6NCW7 530 aa18.5■□□□□ 0.55
PCBP4-216ENST00000497390 CCDC175P0C221 793 aa18.5■□□□□ 0.55
PCBP4-216ENST00000497390 USP17L1Q7RTZ2 530 aa18.5■□□□□ 0.55
PCBP4-216ENST00000497390 PANX2Q96RD6 677 aa18.5■□□□□ 0.55
PCBP4-216ENST00000497390 TMEM60Q9H2L4 133 aa18.5■□□□□ 0.55
PCBP4-216ENST00000497390 MCM9Q9NXL9 1143 aa18.5■□□□□ 0.55
PCBP4-216ENST00000497390 DDAH1O94760 285 aa18.49■□□□□ 0.55
PCBP4-216ENST00000497390 PFKFB3Q16875 520 aaPredicted RBP18.49■□□□□ 0.55
PCBP4-216ENST00000497390 CC2D1AQ6P1N0 951 aaPredicted RBP18.49■□□□□ 0.55
PCBP4-216ENST00000497390 C4orf32Q8N8J7 132 aa18.49■□□□□ 0.55
PCBP4-216ENST00000497390 TRIM10Q9UDY6 481 aa18.49■□□□□ 0.55
PCBP4-216ENST00000497390 KIAA1551Q9HCM1 1747 aa18.49■□□□□ 0.55
PCBP4-216ENST00000497390 PRCPP42785 496 aa18.49■□□□□ 0.55
PCBP4-216ENST00000497390 PPP2R5BQ15173 497 aa18.49■□□□□ 0.55
PCBP4-216ENST00000497390 ZNF569Q5MCW4 686 aa18.49■□□□□ 0.55
PCBP4-216ENST00000497390 BRMS1Q9HCU9 246 aa18.49■□□□□ 0.55
PCBP4-216ENST00000497390 N4BP3O15049 544 aa18.48■□□□□ 0.55
PCBP4-216ENST00000497390 NKRFO15226 690 aaKnown RBP eCLIP18.48■□□□□ 0.55
PCBP4-216ENST00000497390 GYS2P54840 703 aa18.48■□□□□ 0.55
PCBP4-216ENST00000497390 DIXDC1Q155Q3 683 aa18.48■□□□□ 0.55
PCBP4-216ENST00000497390 NELFBQ8WX92 580 aa18.48■□□□□ 0.55
PCBP4-216ENST00000497390 CHP1Q99653 195 aa18.48■□□□□ 0.55
PCBP4-216ENST00000497390 SRRTQ9BXP5 876 aaKnown RBP18.48■□□□□ 0.55
PCBP4-216ENST00000497390 GOLGA8HP0CJ92 632 aa18.48■□□□□ 0.55
PCBP4-216ENST00000497390 HIBADHP31937 336 aaKnown RBP18.48■□□□□ 0.55
PCBP4-216ENST00000497390 RPS8P62241 208 aaKnown RBP18.48■□□□□ 0.55
PCBP4-216ENST00000497390 TFAP4Q01664 338 aa18.48■□□□□ 0.55
PCBP4-216ENST00000497390 NAALADL2Q58DX5 795 aa18.48■□□□□ 0.55
PCBP4-216ENST00000497390 IRF2BP1Q8IU81 584 aa18.48■□□□□ 0.55
PCBP4-216ENST00000497390 IQUBQ8NA54 791 aa18.48■□□□□ 0.55
PCBP4-216ENST00000497390 ZNF652Q9Y2D9 606 aa18.48■□□□□ 0.55
PCBP4-216ENST00000497390 LAMB1P07942 1786 aa18.48■□□□□ 0.55
PCBP4-216ENST00000497390 CYTH3O43739 400 aa18.47■□□□□ 0.55
PCBP4-216ENST00000497390 ORC4O43929 436 aa18.47■□□□□ 0.55
PCBP4-216ENST00000497390 FAM182BQ5T319 152 aa18.47■□□□□ 0.55
PCBP4-216ENST00000497390 SLC35F6Q8N357 371 aa18.47■□□□□ 0.55
PCBP4-216ENST00000497390 COL5A3P25940 1745 aaPredicted RBP18.47■□□□□ 0.55
PCBP4-216ENST00000497390 CALM1P0DP23 149 aa18.47■□□□□ 0.55
PCBP4-216ENST00000497390 CALM2P0DP24 149 aa18.47■□□□□ 0.55
PCBP4-216ENST00000497390 CALM3P0DP25 149 aa18.47■□□□□ 0.55
PCBP4-216ENST00000497390 NOL10Q9BSC4 688 aaKnown RBP18.47■□□□□ 0.55
PCBP4-216ENST00000497390 SUGCTQ9HAC7 445 aa18.47■□□□□ 0.55
PCBP4-216ENST00000497390 COPB1P53618 953 aaKnown RBP18.46■□□□□ 0.55
PCBP4-216ENST00000497390 SLF1Q9BQI6 1058 aa18.46■□□□□ 0.55
PCBP4-216ENST00000497390 CRNKL1Q9BZJ0 848 aaKnown RBP18.46■□□□□ 0.55
PCBP4-216ENST00000497390 KCNJ18B7U540 433 aa18.45■□□□□ 0.54
PCBP4-216ENST00000497390 RPN1P04843 607 aaKnown RBP18.45■□□□□ 0.54
PCBP4-216ENST00000497390 PAK1Q13153 545 aa18.45■□□□□ 0.54
PCBP4-216ENST00000497390 KCNJ12Q14500 433 aa18.45■□□□□ 0.54
PCBP4-216ENST00000497390 INF2Q27J81 1249 aa18.45■□□□□ 0.54
PCBP4-216ENST00000497390 TCP11X2Q5H9J9 407 aa18.45■□□□□ 0.54
PCBP4-216ENST00000497390 SH3RF3Q8TEJ3 882 aaPredicted RBP18.45■□□□□ 0.54
PCBP4-216ENST00000497390 ABHD10Q9NUJ1 306 aa18.45■□□□□ 0.54
PCBP4-216ENST00000497390 GOLGA6L9A6NEM1 432 aa18.45■□□□□ 0.54
PCBP4-216ENST00000497390 ST5P78524 1137 aa18.45■□□□□ 0.54
PCBP4-216ENST00000497390 BLIDQ8IZY5 108 aa18.45■□□□□ 0.54
PCBP4-216ENST00000497390 PNMA1Q8ND90 353 aa18.45■□□□□ 0.54
PCBP4-216ENST00000497390 PNKPQ96T60 521 aa18.45■□□□□ 0.54
PCBP4-216ENST00000497390 NUP88Q99567 741 aaPredicted RBP18.45■□□□□ 0.54
PCBP4-216ENST00000497390 COL22A1Q8NFW1 1626 aaPredicted RBP18.44■□□□□ 0.54
PCBP4-216ENST00000497390 GTPBP6O43824 516 aaPredicted RBP18.44■□□□□ 0.54
PCBP4-216ENST00000497390 CLEC4GQ6UXB4 293 aa18.44■□□□□ 0.54
PCBP4-216ENST00000497390 ANKZF1Q9H8Y5 726 aa18.44■□□□□ 0.54
PCBP4-216ENST00000497390 ARGLU1Q9NWB6 273 aaPredicted RBP18.44■□□□□ 0.54
PCBP4-216ENST00000497390 ARHGAP25P42331 645 aa18.44■□□□□ 0.54
PCBP4-216ENST00000497390 WWC2Q6AWC2 1192 aa18.44■□□□□ 0.54
PCBP4-216ENST00000497390 GPR161Q8N6U8 529 aaKnown RBP18.44■□□□□ 0.54
PCBP4-216ENST00000497390 LIMA1Q9UHB6 759 aaKnown RBP18.44■□□□□ 0.54
PCBP4-216ENST00000497390 SAP30BPQ9UHR5 308 aaKnown RBP18.44■□□□□ 0.54
PCBP4-216ENST00000497390 MAD2L2Q9UI95 211 aa18.44■□□□□ 0.54
PCBP4-216ENST00000497390 REXO2Q9Y3B8 237 aaKnown RBP18.44■□□□□ 0.54
PCBP4-216ENST00000497390 STAT6P42226 847 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms