RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 OTOP1Q7RTM1 612 aa13.57□□□□□ -0.24
HLA-B-254ENST00000497377 STAG1Q8WVM7 1258 aa13.57□□□□□ -0.24
HLA-B-254ENST00000497377 RNF25Q96BH1 459 aaPredicted RBP13.57□□□□□ -0.24
HLA-B-254ENST00000497377 RPAP3Q9H6T3 665 aaPredicted RBP13.57□□□□□ -0.24
HLA-B-254ENST00000497377 MTMR4Q9NYA4 1195 aa13.57□□□□□ -0.24
HLA-B-254ENST00000497377 MORF4L1Q9UBU8 362 aa13.57□□□□□ -0.24
HLA-B-254ENST00000497377 TRIM17Q9Y577 477 aa13.57□□□□□ -0.24
HLA-B-254ENST00000497377 WDR46O15213 610 aaKnown RBP13.56□□□□□ -0.24
HLA-B-254ENST00000497377 CASC1Q6TDU7 716 aa13.56□□□□□ -0.24
HLA-B-254ENST00000497377 LBX2Q6XYB7 198 aa13.56□□□□□ -0.24
HLA-B-254ENST00000497377 MFSD6Q6ZSS7 791 aa13.56□□□□□ -0.24
HLA-B-254ENST00000497377 CLEC10AQ8IUN9 316 aa13.56□□□□□ -0.24
HLA-B-254ENST00000497377 ANKRD13CQ8N6S4 541 aa13.56□□□□□ -0.24
HLA-B-254ENST00000497377 MKL1Q969V6 931 aa13.56□□□□□ -0.24
HLA-B-254ENST00000497377 CEP95Q96GE4 821 aa13.56□□□□□ -0.24
HLA-B-254ENST00000497377 P2RX7Q99572 595 aaKnown RBP13.56□□□□□ -0.24
HLA-B-254ENST00000497377 TMEM121BQ9BXQ6 578 aaPredicted RBP13.56□□□□□ -0.24
HLA-B-254ENST00000497377 HOXC10Q9NYD6 342 aa13.56□□□□□ -0.24
HLA-B-254ENST00000497377 MGAMO43451 1857 aa13.56□□□□□ -0.24
HLA-B-254ENST00000497377 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.55□□□□□ -0.24
HLA-B-254ENST00000497377 RANBP6O60518 1105 aaKnown RBP13.55□□□□□ -0.24
HLA-B-254ENST00000497377 PSMC4P43686 418 aa13.55□□□□□ -0.24
HLA-B-254ENST00000497377 FCGRTP55899 365 aa13.55□□□□□ -0.24
HLA-B-254ENST00000497377 HAND2P61296 217 aa13.55□□□□□ -0.24
HLA-B-254ENST00000497377 FAM47AQ5JRC9 791 aa13.55□□□□□ -0.24
HLA-B-254ENST00000497377 ZFP91Q96JP5 570 aaPredicted RBP13.55□□□□□ -0.24
HLA-B-254ENST00000497377 IL25Q9H293 177 aa13.55□□□□□ -0.24
HLA-B-254ENST00000497377 TOMM22Q9NS69 142 aa13.55□□□□□ -0.24
HLA-B-254ENST00000497377 CLIP2Q9UDT6 1046 aa13.55□□□□□ -0.24
HLA-B-254ENST00000497377 RABGAP1Q9Y3P9 1069 aa13.55□□□□□ -0.24
HLA-B-254ENST00000497377 MYPNQ86TC9 1320 aa13.55□□□□□ -0.24
HLA-B-254ENST00000497377 FMNL1O95466 1100 aaPredicted RBP13.54□□□□□ -0.24
HLA-B-254ENST00000497377 COG2Q14746 738 aa13.54□□□□□ -0.24
HLA-B-254ENST00000497377 KIAA1211Q6ZU35 1233 aa13.54□□□□□ -0.24
HLA-B-254ENST00000497377 TBC1D10CQ8IV04 446 aa13.54□□□□□ -0.24
HLA-B-254ENST00000497377 GMCL1P1Q8NEA9 526 aa13.54□□□□□ -0.24
HLA-B-254ENST00000497377 GPRC5AQ8NFJ5 357 aa13.54□□□□□ -0.24
HLA-B-254ENST00000497377 ESR2Q92731 530 aa13.54□□□□□ -0.24
HLA-B-254ENST00000497377 ABHD8Q96I13 439 aa13.54□□□□□ -0.24
HLA-B-254ENST00000497377 TANGO6Q9C0B7 1094 aa13.54□□□□□ -0.24
HLA-B-254ENST00000497377 NBPF3Q9H094 633 aa13.54□□□□□ -0.24
HLA-B-254ENST00000497377 CNNM2Q9H8M5 875 aa13.54□□□□□ -0.24
HLA-B-254ENST00000497377 TCP11L1Q9NUJ3 509 aa13.54□□□□□ -0.24
HLA-B-254ENST00000497377 PTPN22Q9Y2R2 807 aa13.54□□□□□ -0.24
HLA-B-254ENST00000497377 F5H6K3 240 aa13.53□□□□□ -0.24
HLA-B-254ENST00000497377 NOVP48745 357 aa13.53□□□□□ -0.24
HLA-B-254ENST00000497377 CCNA1P78396 465 aa13.53□□□□□ -0.24
HLA-B-254ENST00000497377 KLRC3Q07444 240 aa13.53□□□□□ -0.24
HLA-B-254ENST00000497377 CCDC178Q5BJE1 867 aa13.53□□□□□ -0.24
HLA-B-254ENST00000497377 RRP12Q5JTH9 1297 aaKnown RBP13.53□□□□□ -0.24
HLA-B-254ENST00000497377 KIAA1755Q5JYT7 1200 aa13.53□□□□□ -0.24
HLA-B-254ENST00000497377 SKAP1Q86WV1 359 aa13.53□□□□□ -0.24
HLA-B-254ENST00000497377 SPICE1Q8N0Z3 855 aa13.53□□□□□ -0.24
HLA-B-254ENST00000497377 MB21D1Q8N884 522 aa13.53□□□□□ -0.24
HLA-B-254ENST00000497377 TRIM47Q96LD4 638 aa13.53□□□□□ -0.24
HLA-B-254ENST00000497377 ESYT1Q9BSJ8 1104 aa13.53□□□□□ -0.24
HLA-B-254ENST00000497377 KRT23Q9C075 422 aa13.53□□□□□ -0.24
HLA-B-254ENST00000497377 ARHGAP39Q9C0H5 1083 aa13.53□□□□□ -0.24
HLA-B-254ENST00000497377 INCENPQ9NQS7 918 aa13.53□□□□□ -0.24
HLA-B-254ENST00000497377 RBPJLQ9UBG7 517 aa13.53□□□□□ -0.24
HLA-B-254ENST00000497377 TACC3Q9Y6A5 838 aa13.53□□□□□ -0.24
HLA-B-254ENST00000497377 RLFQ13129 1914 aa13.52□□□□□ -0.24
HLA-B-254ENST00000497377 SPDYE16A6NNV3 312 aaPredicted RBP13.52□□□□□ -0.25
HLA-B-254ENST00000497377 RAD21O60216 631 aa13.52□□□□□ -0.25
HLA-B-254ENST00000497377 CDC45O75419 566 aa13.52□□□□□ -0.25
HLA-B-254ENST00000497377 FLOT1O75955 427 aa13.52□□□□□ -0.25
HLA-B-254ENST00000497377 NDUFB10O96000 172 aa13.52□□□□□ -0.25
HLA-B-254ENST00000497377 ERVK-9P63128 1117 aa13.52□□□□□ -0.25
HLA-B-254ENST00000497377 ERVK-24P63145 666 aa13.52□□□□□ -0.25
HLA-B-254ENST00000497377 CAP1Q01518 475 aa13.52□□□□□ -0.25
HLA-B-254ENST00000497377 PTH1RQ03431 593 aa13.52□□□□□ -0.25
HLA-B-254ENST00000497377 MAP4K1Q92918 833 aa13.52□□□□□ -0.25
HLA-B-254ENST00000497377 COA7Q96BR5 231 aa13.52□□□□□ -0.25
HLA-B-254ENST00000497377 TTC14Q96N46 770 aa13.52□□□□□ -0.25
HLA-B-254ENST00000497377 IL17RBQ9NRM6 502 aa13.52□□□□□ -0.25
HLA-B-254ENST00000497377 SRRDQ9UH36 339 aa13.52□□□□□ -0.25
HLA-B-254ENST00000497377 STX8Q9UNK0 236 aa13.52□□□□□ -0.25
HLA-B-254ENST00000497377 HPS5Q9UPZ3 1129 aa13.52□□□□□ -0.25
HLA-B-254ENST00000497377 PARP14Q460N5 1801 aa13.52□□□□□ -0.25
HLA-B-254ENST00000497377 ZSWIM8A7E2V4 1837 aa13.51□□□□□ -0.25
HLA-B-254ENST00000497377 TNPO2O14787 897 aaKnown RBP13.51□□□□□ -0.25
HLA-B-254ENST00000497377 CTGFP29279 349 aa13.51□□□□□ -0.25
HLA-B-254ENST00000497377 MAPK4P31152 587 aa13.51□□□□□ -0.25
HLA-B-254ENST00000497377 IQCA1Q86XH1 822 aa13.51□□□□□ -0.25
HLA-B-254ENST00000497377 CCAR1Q8IX12 1150 aaKnown RBP13.51□□□□□ -0.25
HLA-B-254ENST00000497377 GMCL1Q96IK5 515 aa13.51□□□□□ -0.25
HLA-B-254ENST00000497377 PAGR1Q9BTK6 254 aa13.51□□□□□ -0.25
HLA-B-254ENST00000497377 TXNRD2Q9NNW7 524 aa13.51□□□□□ -0.25
HLA-B-254ENST00000497377 HTTP42858 3142 aa13.51□□□□□ -0.25
HLA-B-254ENST00000497377 A0A0G2JMZ2 1700 aa13.5□□□□□ -0.25
HLA-B-254ENST00000497377 NEDD4P46934 1319 aa13.5□□□□□ -0.25
HLA-B-254ENST00000497377 NMT2O60551 498 aa13.5□□□□□ -0.25
HLA-B-254ENST00000497377 TOP1P11387 765 aaKnown RBP13.5□□□□□ -0.25
HLA-B-254ENST00000497377 TRDNQ13061 729 aa13.5□□□□□ -0.25
HLA-B-254ENST00000497377 FAM83BQ5T0W9 1011 aa13.5□□□□□ -0.25
HLA-B-254ENST00000497377 IFFO2Q5TF58 517 aa13.5□□□□□ -0.25
HLA-B-254ENST00000497377 SLFN13Q68D06 897 aa13.5□□□□□ -0.25
HLA-B-254ENST00000497377 LRRC47Q8N1G4 583 aaKnown RBP13.5□□□□□ -0.25
HLA-B-254ENST00000497377 MARVELD3Q96A59 401 aa13.5□□□□□ -0.25
HLA-B-254ENST00000497377 FEM1BQ9UK73 627 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms