RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 PPT2Q9UMR5 302 aa10.05□□□□□ -0.8
TARDBP-210ENST00000496840 ZNF281Q9Y2X9 895 aa10.05□□□□□ -0.8
TARDBP-210ENST00000496840 ZNF503-AS2A6NEH8 195 aa10.04□□□□□ -0.8
TARDBP-210ENST00000496840 SIGLEC6O43699 453 aa10.04□□□□□ -0.8
TARDBP-210ENST00000496840 HK2P52789 917 aa10.04□□□□□ -0.8
TARDBP-210ENST00000496840 SNW1Q13573 536 aaKnown RBP10.04□□□□□ -0.8
TARDBP-210ENST00000496840 RNF111Q6ZNA4 994 aa10.04□□□□□ -0.8
TARDBP-210ENST00000496840 TMC3Q7Z5M5 1100 aa10.04□□□□□ -0.8
TARDBP-210ENST00000496840 PDZD8Q8NEN9 1154 aa10.04□□□□□ -0.8
TARDBP-210ENST00000496840 SYTL4Q96C24 671 aaPredicted RBP10.04□□□□□ -0.8
TARDBP-210ENST00000496840 ZNF512BQ96KM6 892 aaPredicted RBP10.04□□□□□ -0.8
TARDBP-210ENST00000496840 PRR13Q9NZ81 148 aa10.04□□□□□ -0.8
TARDBP-210ENST00000496840 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.03□□□□□ -0.8
TARDBP-210ENST00000496840 TMEM67Q5HYA8 995 aa10.03□□□□□ -0.8
TARDBP-210ENST00000496840 TCTN2Q96GX1 697 aa10.03□□□□□ -0.8
TARDBP-210ENST00000496840 TGIF2Q9GZN2 237 aa10.03□□□□□ -0.8
TARDBP-210ENST00000496840 PRDM14Q9GZV8 571 aa10.03□□□□□ -0.8
TARDBP-210ENST00000496840 MKRN2Q9H000 416 aaKnown RBP10.03□□□□□ -0.8
TARDBP-210ENST00000496840 GUCY2CP25092 1073 aa10.02□□□□□ -0.81
TARDBP-210ENST00000496840 PMS1P54277 932 aaKnown RBP10.02□□□□□ -0.81
TARDBP-210ENST00000496840 LCE1DQ5T752 114 aa10.02□□□□□ -0.81
TARDBP-210ENST00000496840 C9orf131Q5VYM1 1079 aa10.02□□□□□ -0.81
TARDBP-210ENST00000496840 FBXW10Q5XX13 1052 aa10.02□□□□□ -0.81
TARDBP-210ENST00000496840 LSRQ86X29 649 aaPredicted RBP10.02□□□□□ -0.81
TARDBP-210ENST00000496840 USHBP1Q8N6Y0 703 aa10.02□□□□□ -0.81
TARDBP-210ENST00000496840 MYLIPQ8WY64 445 aa10.02□□□□□ -0.81
TARDBP-210ENST00000496840 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.02□□□□□ -0.81
TARDBP-210ENST00000496840 PRAMEF1O95521 474 aa10.01□□□□□ -0.81
TARDBP-210ENST00000496840 DUSP4Q13115 394 aa10.01□□□□□ -0.81
TARDBP-210ENST00000496840 NR0B2Q15466 257 aa10.01□□□□□ -0.81
TARDBP-210ENST00000496840 LILRA2Q8N149 483 aa10.01□□□□□ -0.81
TARDBP-210ENST00000496840 OXR1Q8N573 874 aa10.01□□□□□ -0.81
TARDBP-210ENST00000496840 LINC00116Q8NCU8 138 aa10.01□□□□□ -0.81
TARDBP-210ENST00000496840 ABHD4Q8TB40 342 aa10.01□□□□□ -0.81
TARDBP-210ENST00000496840 SMARCC1Q92922 1105 aaPredicted RBP10.01□□□□□ -0.81
TARDBP-210ENST00000496840 SP110Q9HB58 689 aa10.01□□□□□ -0.81
TARDBP-210ENST00000496840 EFR3BQ9Y2G0 817 aa10.01□□□□□ -0.81
TARDBP-210ENST00000496840 PCDHB12Q9Y5F1 795 aa10.01□□□□□ -0.81
TARDBP-210ENST00000496840 FITM1A5D6W6 292 aa10□□□□□ -0.81
TARDBP-210ENST00000496840 PCBP3P57721 371 aaKnown RBP10□□□□□ -0.81
TARDBP-210ENST00000496840 ERVFC1P60507 584 aa10□□□□□ -0.81
TARDBP-210ENST00000496840 AUHQ13825 339 aaKnown RBP10□□□□□ -0.81
TARDBP-210ENST00000496840 LRRC10BA6NIK2 292 aa9.99□□□□□ -0.81
TARDBP-210ENST00000496840 FARP2O94887 1054 aaPredicted RBP9.99□□□□□ -0.81
TARDBP-210ENST00000496840 CHRNEQ04844 493 aa9.99□□□□□ -0.81
TARDBP-210ENST00000496840 ANKS4BQ8N8V4 417 aa9.99□□□□□ -0.81
TARDBP-210ENST00000496840 LINC01599Q8WXQ3 324 aa9.99□□□□□ -0.81
TARDBP-210ENST00000496840 LIN37Q96GY3 246 aaPredicted RBP9.99□□□□□ -0.81
TARDBP-210ENST00000496840 CRBNQ96SW2 442 aa9.99□□□□□ -0.81
TARDBP-210ENST00000496840 CHST7Q9NS84 486 aa9.99□□□□□ -0.81
TARDBP-210ENST00000496840 C9IYK1 514 aa9.98□□□□□ -0.81
TARDBP-210ENST00000496840 YBX3P16989 372 aaKnown RBP eCLIP9.98□□□□□ -0.81
TARDBP-210ENST00000496840 GIPRP48546 466 aa9.98□□□□□ -0.81
TARDBP-210ENST00000496840 UNC5AQ6ZN44 842 aa9.98□□□□□ -0.81
TARDBP-210ENST00000496840 CCDC81Q6ZN84 652 aa9.98□□□□□ -0.81
TARDBP-210ENST00000496840 SPPL2CQ8IUH8 684 aa9.98□□□□□ -0.81
TARDBP-210ENST00000496840 C7orf61Q8IZ16 206 aa9.98□□□□□ -0.81
TARDBP-210ENST00000496840 OR6P1Q8NGX9 317 aa9.98□□□□□ -0.81
TARDBP-210ENST00000496840 G6PC3Q9BUM1 346 aa9.98□□□□□ -0.81
TARDBP-210ENST00000496840 FOXP3Q9BZS1 431 aa9.98□□□□□ -0.81
TARDBP-210ENST00000496840 FBXL21Q9UKT6 434 aa9.98□□□□□ -0.81
TARDBP-210ENST00000496840 TCFL5Q9UL49 500 aa9.98□□□□□ -0.81
TARDBP-210ENST00000496840 EIF6P56537 245 aaKnown RBP9.97□□□□□ -0.81
TARDBP-210ENST00000496840 ZYXQ15942 572 aaKnown RBP9.97□□□□□ -0.81
TARDBP-210ENST00000496840 BBS9Q3SYG4 887 aa9.97□□□□□ -0.81
TARDBP-210ENST00000496840 ANKRD39Q53RE8 183 aa9.97□□□□□ -0.81
TARDBP-210ENST00000496840 RUFY4Q6ZNE9 571 aa9.97□□□□□ -0.81
TARDBP-210ENST00000496840 CCDC144CPQ8IYA2 1237 aa9.97□□□□□ -0.81
TARDBP-210ENST00000496840 C19orf47Q8N9M1 422 aaKnown RBP9.97□□□□□ -0.81
TARDBP-210ENST00000496840 SEC16BQ96JE7 1060 aa9.97□□□□□ -0.81
TARDBP-210ENST00000496840 SRRTQ9BXP5 876 aaKnown RBP9.97□□□□□ -0.81
TARDBP-210ENST00000496840 GFOD1Q9NXC2 390 aa9.97□□□□□ -0.81
TARDBP-210ENST00000496840 EBF1Q9UH73 591 aa9.97□□□□□ -0.81
TARDBP-210ENST00000496840 SLC12A7Q9Y666 1083 aa9.97□□□□□ -0.81
TARDBP-210ENST00000496840 FAM86C2PA6NEL3 165 aa9.96□□□□□ -0.82
TARDBP-210ENST00000496840 SHOXO15266 292 aa9.96□□□□□ -0.82
TARDBP-210ENST00000496840 C8AP07357 584 aa9.96□□□□□ -0.82
TARDBP-210ENST00000496840 MESP2Q0VG99 397 aa9.96□□□□□ -0.82
TARDBP-210ENST00000496840 MLANAQ16655 118 aa9.96□□□□□ -0.82
TARDBP-210ENST00000496840 MPZL3Q6UWV2 235 aa9.96□□□□□ -0.82
TARDBP-210ENST00000496840 PPFIBP1Q86W92 1011 aa9.96□□□□□ -0.82
TARDBP-210ENST00000496840 CCSER2Q9H7U1 834 aa9.96□□□□□ -0.82
TARDBP-210ENST00000496840 SSU72P8A0A1W2PR75 194 aa9.95□□□□□ -0.82
TARDBP-210ENST00000496840 TMEM82A0PJX8 343 aa9.95□□□□□ -0.82
TARDBP-210ENST00000496840 SYPP08247 313 aa9.95□□□□□ -0.82
TARDBP-210ENST00000496840 ENDOUP21128 410 aaKnown RBP9.95□□□□□ -0.82
TARDBP-210ENST00000496840 RPL10P27635 214 aaKnown RBP9.95□□□□□ -0.82
TARDBP-210ENST00000496840 BMP8BP34820 402 aa9.95□□□□□ -0.82
TARDBP-210ENST00000496840 ZNF648Q5T619 568 aaPredicted RBP9.95□□□□□ -0.82
TARDBP-210ENST00000496840 FAM84AQ96KN4 292 aa9.95□□□□□ -0.82
TARDBP-210ENST00000496840 ACBD3Q9H3P7 528 aa9.95□□□□□ -0.82
TARDBP-210ENST00000496840 ZNF214Q9UL59 606 aaPredicted RBP9.95□□□□□ -0.82
TARDBP-210ENST00000496840 NASPP49321 788 aaPredicted RBP9.94□□□□□ -0.82
TARDBP-210ENST00000496840 SNX17Q15036 470 aa9.94□□□□□ -0.82
TARDBP-210ENST00000496840 WAPLQ7Z5K2 1190 aa9.94□□□□□ -0.82
TARDBP-210ENST00000496840 BHLHE22Q8NFJ8 381 aaPredicted RBP9.94□□□□□ -0.82
TARDBP-210ENST00000496840 MINPP1Q9UNW1 487 aa9.94□□□□□ -0.82
TARDBP-210ENST00000496840 TRHRP34981 398 aaPredicted RBP9.93□□□□□ -0.82
TARDBP-210ENST00000496840 CTSKP43235 329 aa9.93□□□□□ -0.82
TARDBP-210ENST00000496840 KIR2DL1P43626 348 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms