RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 AFF3P51826 1226 aaKnown RBP6.35□□□□□ -1.39
CLK1-214ENST00000496205 TMEM201Q5SNT2 666 aa6.35□□□□□ -1.39
CLK1-214ENST00000496205 PRRT2Q7Z6L0 340 aaPredicted RBP6.35□□□□□ -1.39
CLK1-214ENST00000496205 FBXO33Q7Z6M2 555 aa6.35□□□□□ -1.39
CLK1-214ENST00000496205 ZDHHC14Q8IZN3 488 aa6.35□□□□□ -1.39
CLK1-214ENST00000496205 KIAA1522Q9P206 1035 aaPredicted RBP6.35□□□□□ -1.39
CLK1-214ENST00000496205 SLC22A31A6NKX4 558 aa6.34□□□□□ -1.39
CLK1-214ENST00000496205 CHURC1-FNTBB4DL54 471 aa6.34□□□□□ -1.39
CLK1-214ENST00000496205 ZNF16P17020 682 aaPredicted RBP6.34□□□□□ -1.39
CLK1-214ENST00000496205 VIPR1P32241 457 aa6.34□□□□□ -1.39
CLK1-214ENST00000496205 RANGAP1P46060 587 aaPredicted RBP6.34□□□□□ -1.39
CLK1-214ENST00000496205 MEI1Q5TIA1 1274 aa6.34□□□□□ -1.39
CLK1-214ENST00000496205 SLFN12Q8IYM2 578 aa6.34□□□□□ -1.39
CLK1-214ENST00000496205 USHBP1Q8N6Y0 703 aa6.34□□□□□ -1.39
CLK1-214ENST00000496205 AK5Q9Y6K8 562 aa6.34□□□□□ -1.39
CLK1-214ENST00000496205 N4BP3O15049 544 aa6.33□□□□□ -1.4
CLK1-214ENST00000496205 YARSP54577 528 aaKnown RBP6.33□□□□□ -1.4
CLK1-214ENST00000496205 BNC2Q6ZN30 1099 aaPredicted RBP6.33□□□□□ -1.4
CLK1-214ENST00000496205 TMEFF1Q8IYR6 380 aa6.33□□□□□ -1.4
CLK1-214ENST00000496205 SYT8Q8NBV8 401 aa6.33□□□□□ -1.4
CLK1-214ENST00000496205 VWCEQ96DN2 955 aa6.33□□□□□ -1.4
CLK1-214ENST00000496205 BCL2L13Q9BXK5 485 aa6.33□□□□□ -1.4
CLK1-214ENST00000496205 SIRT5Q9NXA8 310 aa6.33□□□□□ -1.4
CLK1-214ENST00000496205 HRKO00198 91 aa6.32□□□□□ -1.4
CLK1-214ENST00000496205 IRS4O14654 1257 aaPredicted RBP6.32□□□□□ -1.4
CLK1-214ENST00000496205 RPL10P27635 214 aaKnown RBP6.32□□□□□ -1.4
CLK1-214ENST00000496205 TNNI2P48788 182 aa6.32□□□□□ -1.4
CLK1-214ENST00000496205 CLEC16AQ2KHT3 1053 aa6.32□□□□□ -1.4
CLK1-214ENST00000496205 GIPC2Q8TF65 315 aa6.32□□□□□ -1.4
CLK1-214ENST00000496205 ASPNQ9BXN1 380 aa6.32□□□□□ -1.4
CLK1-214ENST00000496205 FAM221AA4D161 298 aa6.31□□□□□ -1.4
CLK1-214ENST00000496205 NRDCO43847 1150 aa6.31□□□□□ -1.4
CLK1-214ENST00000496205 DNAJA2O60884 412 aa6.31□□□□□ -1.4
CLK1-214ENST00000496205 CILPO75339 1184 aa6.31□□□□□ -1.4
CLK1-214ENST00000496205 CELA3BP08861 270 aa6.31□□□□□ -1.4
CLK1-214ENST00000496205 CDR1P51861 262 aa6.31□□□□□ -1.4
CLK1-214ENST00000496205 YBX1P67809 324 aaKnown RBP6.31□□□□□ -1.4
CLK1-214ENST00000496205 PHC3Q8NDX5 983 aa6.31□□□□□ -1.4
CLK1-214ENST00000496205 PLCD4Q9BRC7 762 aa6.31□□□□□ -1.4
CLK1-214ENST00000496205 FOXP3Q9BZS1 431 aa6.31□□□□□ -1.4
CLK1-214ENST00000496205 CRTAC1Q9NQ79 661 aa6.31□□□□□ -1.4
CLK1-214ENST00000496205 ZMYM5Q9UJ78 669 aa6.31□□□□□ -1.4
CLK1-214ENST00000496205 TMEM82A0PJX8 343 aa6.3□□□□□ -1.4
CLK1-214ENST00000496205 F6X3S4 739 aa6.3□□□□□ -1.4
CLK1-214ENST00000496205 ERCC3P19447 782 aa6.3□□□□□ -1.4
CLK1-214ENST00000496205 KIR3DS1Q14943 382 aa6.3□□□□□ -1.4
CLK1-214ENST00000496205 SLC14A2Q15849 920 aa6.3□□□□□ -1.4
CLK1-214ENST00000496205 ZPBP2Q6X784 338 aa6.3□□□□□ -1.4
CLK1-214ENST00000496205 RNF111Q6ZNA4 994 aa6.3□□□□□ -1.4
CLK1-214ENST00000496205 CEP128Q6ZU80 1094 aa6.3□□□□□ -1.4
CLK1-214ENST00000496205 WAPLQ7Z5K2 1190 aa6.3□□□□□ -1.4
CLK1-214ENST00000496205 MAP6Q96JE9 813 aa6.3□□□□□ -1.4
CLK1-214ENST00000496205 HHIPL1Q96JK4 782 aa6.3□□□□□ -1.4
CLK1-214ENST00000496205 CCDC74BQ96LY2 380 aa6.3□□□□□ -1.4
CLK1-214ENST00000496205 KIF2CQ99661 725 aa6.3□□□□□ -1.4
CLK1-214ENST00000496205 HDAC8Q9BY41 377 aa6.3□□□□□ -1.4
CLK1-214ENST00000496205 ADAM7Q9H2U9 754 aa6.3□□□□□ -1.4
CLK1-214ENST00000496205 REV1Q9UBZ9 1251 aa6.3□□□□□ -1.4
CLK1-214ENST00000496205 KLHL3Q9UH77 587 aa6.3□□□□□ -1.4
CLK1-214ENST00000496205 PRR36Q9H6K5 1346 aa6.29□□□□□ -1.4
CLK1-214ENST00000496205 PRPF40AO75400 957 aaKnown RBP6.29□□□□□ -1.4
CLK1-214ENST00000496205 KIR2DL1P43626 348 aaPredicted RBP6.29□□□□□ -1.4
CLK1-214ENST00000496205 KIR2DL2P43627 348 aaPredicted RBP6.29□□□□□ -1.4
CLK1-214ENST00000496205 NMIQ13287 307 aaPredicted RBP6.29□□□□□ -1.4
CLK1-214ENST00000496205 FAM129CQ86XR2 697 aa6.29□□□□□ -1.4
CLK1-214ENST00000496205 SYTL5Q8TDW5 730 aaPredicted RBP6.29□□□□□ -1.4
CLK1-214ENST00000496205 POLR3KQ9Y2Y1 108 aaPredicted RBP6.29□□□□□ -1.4
CLK1-214ENST00000496205 F13A1P00488 732 aa6.28□□□□□ -1.4
CLK1-214ENST00000496205 ADRB1P08588 477 aa6.28□□□□□ -1.4
CLK1-214ENST00000496205 PNLIPP16233 465 aa6.28□□□□□ -1.4
CLK1-214ENST00000496205 CNKSR3Q6P9H4 555 aa6.28□□□□□ -1.4
CLK1-214ENST00000496205 CCDC84Q86UT8 332 aaPredicted RBP6.28□□□□□ -1.4
CLK1-214ENST00000496205 IGDCC3Q8IVU1 814 aa6.28□□□□□ -1.4
CLK1-214ENST00000496205 ENOX1Q8TC92 643 aaKnown RBP6.28□□□□□ -1.4
CLK1-214ENST00000496205 MZB1Q8WU39 189 aa6.28□□□□□ -1.4
CLK1-214ENST00000496205 TCTN2Q96GX1 697 aa6.28□□□□□ -1.4
CLK1-214ENST00000496205 DUSP9Q99956 384 aaKnown RBP6.28□□□□□ -1.4
CLK1-214ENST00000496205 IGSF5Q9NSI5 407 aa6.28□□□□□ -1.4
CLK1-214ENST00000496205 KLHL14Q9P2G3 628 aa6.28□□□□□ -1.4
CLK1-214ENST00000496205 E9PSI1 815 aa6.27□□□□□ -1.41
CLK1-214ENST00000496205 GRIN3BO60391 1043 aa6.27□□□□□ -1.41
CLK1-214ENST00000496205 CAMK2GQ13555 558 aaPredicted RBP6.27□□□□□ -1.41
CLK1-214ENST00000496205 TMC3Q7Z5M5 1100 aa6.27□□□□□ -1.41
CLK1-214ENST00000496205 TP53I13Q8NBR0 393 aaPredicted RBP6.27□□□□□ -1.41
CLK1-214ENST00000496205 GATAD2BQ8WXI9 593 aa6.27□□□□□ -1.41
CLK1-214ENST00000496205 MRRFQ96E11 262 aaKnown RBP6.27□□□□□ -1.41
CLK1-214ENST00000496205 TCFL5Q9UL49 500 aa6.27□□□□□ -1.41
CLK1-214ENST00000496205 FKTNO75072 461 aa6.26□□□□□ -1.41
CLK1-214ENST00000496205 HTR3BO95264 441 aa6.26□□□□□ -1.41
CLK1-214ENST00000496205 BPNT1O95861 308 aa6.26□□□□□ -1.41
CLK1-214ENST00000496205 PF4P02776 101 aa6.26□□□□□ -1.41
CLK1-214ENST00000496205 RLBP1P12271 317 aa6.26□□□□□ -1.41
CLK1-214ENST00000496205 ERVFRD-1P60508 538 aa6.26□□□□□ -1.41
CLK1-214ENST00000496205 BBS9Q3SYG4 887 aa6.26□□□□□ -1.41
CLK1-214ENST00000496205 LDHDQ86WU2 507 aa6.26□□□□□ -1.41
CLK1-214ENST00000496205 PHACTR4Q8IZ21 702 aa6.26□□□□□ -1.41
CLK1-214ENST00000496205 DAGLBQ8NCG7 672 aa6.26□□□□□ -1.41
CLK1-214ENST00000496205 NOC4LQ9BVI4 516 aaKnown RBP6.26□□□□□ -1.41
CLK1-214ENST00000496205 LUC7LQ9NQ29 371 aaKnown RBP6.26□□□□□ -1.41
CLK1-214ENST00000496205 RTP1P59025 263 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms