RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 BTBD19C9JJ37 291 aa15.78■□□□□ 0.12
PTPN7-218ENST00000496197 SLC35G1Q2M3R5 365 aa15.78■□□□□ 0.12
PTPN7-218ENST00000496197 TTBK2Q6IQ55 1244 aa15.78■□□□□ 0.12
PTPN7-218ENST00000496197 PROCA1Q8NCQ7 364 aaPredicted RBP15.78■□□□□ 0.12
PTPN7-218ENST00000496197 NUP133Q8WUM0 1156 aa15.78■□□□□ 0.12
PTPN7-218ENST00000496197 GMCL1Q96IK5 515 aa15.78■□□□□ 0.12
PTPN7-218ENST00000496197 FAM217BQ9NTX9 383 aaPredicted RBP15.78■□□□□ 0.12
PTPN7-218ENST00000496197 FBXO28Q9NVF7 368 aa15.78■□□□□ 0.12
PTPN7-218ENST00000496197 MAD2L2Q9UI95 211 aa15.78■□□□□ 0.12
PTPN7-218ENST00000496197 SLC12A7Q9Y666 1083 aa15.78■□□□□ 0.12
PTPN7-218ENST00000496197 GOLGA8BA8MQT2 603 aa15.78■□□□□ 0.12
PTPN7-218ENST00000496197 DTNBO60941 627 aa15.78■□□□□ 0.12
PTPN7-218ENST00000496197 CETPP11597 493 aa15.78■□□□□ 0.12
PTPN7-218ENST00000496197 PDIA3P30101 505 aaKnown RBP15.78■□□□□ 0.12
PTPN7-218ENST00000496197 CDC27P30260 824 aa15.78■□□□□ 0.12
PTPN7-218ENST00000496197 ZNF543Q08ER8 600 aa15.78■□□□□ 0.12
PTPN7-218ENST00000496197 ST3GAL1Q11201 340 aa15.78■□□□□ 0.12
PTPN7-218ENST00000496197 GRM4Q14833 912 aa15.78■□□□□ 0.12
PTPN7-218ENST00000496197 POTEEQ6S8J3 1075 aa15.78■□□□□ 0.12
PTPN7-218ENST00000496197 CATIPQ7Z7H3 387 aa15.78■□□□□ 0.12
PTPN7-218ENST00000496197 TMTC2Q8N394 836 aa15.78■□□□□ 0.12
PTPN7-218ENST00000496197 LPAR1Q92633 364 aa15.78■□□□□ 0.12
PTPN7-218ENST00000496197 TMOD4Q9NZQ9 345 aa15.78■□□□□ 0.12
PTPN7-218ENST00000496197 AGTPBP1Q9UPW5 1226 aa15.78■□□□□ 0.12
PTPN7-218ENST00000496197 BAZ2BQ9UIF8 2168 aaKnown RBP15.77■□□□□ 0.12
PTPN7-218ENST00000496197 SMCHD1A6NHR9 2005 aa15.77■□□□□ 0.12
PTPN7-218ENST00000496197 MANSC4A6NHS7 340 aaPredicted RBP15.77■□□□□ 0.11
PTPN7-218ENST00000496197 WDR46O15213 610 aaKnown RBP15.77■□□□□ 0.11
PTPN7-218ENST00000496197 DDAH1O94760 285 aa15.77■□□□□ 0.11
PTPN7-218ENST00000496197 BMP3P12645 472 aa15.77■□□□□ 0.11
PTPN7-218ENST00000496197 SLC1A4P43007 532 aa15.77■□□□□ 0.11
PTPN7-218ENST00000496197 STK3Q13188 491 aa15.77■□□□□ 0.11
PTPN7-218ENST00000496197 NOGQ13253 232 aa15.77■□□□□ 0.11
PTPN7-218ENST00000496197 ME3Q16798 604 aa15.77■□□□□ 0.11
PTPN7-218ENST00000496197 CCDC96Q2M329 555 aa15.77■□□□□ 0.11
PTPN7-218ENST00000496197 NBPF11Q86T75 865 aa15.77■□□□□ 0.11
PTPN7-218ENST00000496197 CMTR1Q8N1G2 835 aaKnown RBP15.77■□□□□ 0.11
PTPN7-218ENST00000496197 DCAF4Q8WV16 495 aa15.77■□□□□ 0.11
PTPN7-218ENST00000496197 NCOA5Q9HCD5 579 aaKnown RBP15.77■□□□□ 0.11
PTPN7-218ENST00000496197 GPCPD1Q9NPB8 672 aa15.77■□□□□ 0.11
PTPN7-218ENST00000496197 NAP1L2Q9ULW6 460 aaPredicted RBP15.77■□□□□ 0.11
PTPN7-218ENST00000496197 NID2Q14112 1375 aa15.77■□□□□ 0.11
PTPN7-218ENST00000496197 PALM3A6NDB9 673 aaPredicted RBP15.76■□□□□ 0.11
PTPN7-218ENST00000496197 ZBTB43O43298 467 aa15.76■□□□□ 0.11
PTPN7-218ENST00000496197 PLEKHA8P1O95397 391 aa15.76■□□□□ 0.11
PTPN7-218ENST00000496197 SLC16A2P36021 539 aa15.76■□□□□ 0.11
PTPN7-218ENST00000496197 CCT2P78371 535 aaKnown RBP15.76■□□□□ 0.11
PTPN7-218ENST00000496197 CATSPERGQ6ZRH7 1159 aa15.76■□□□□ 0.11
PTPN7-218ENST00000496197 FASTKD5Q7L8L6 764 aaKnown RBP15.76■□□□□ 0.11
PTPN7-218ENST00000496197 GOLGA8AA7E2F4 631 aa15.75■□□□□ 0.11
PTPN7-218ENST00000496197 TMEM232C9JQI7 657 aa15.75■□□□□ 0.11
PTPN7-218ENST00000496197 PDHXO00330 501 aa15.75■□□□□ 0.11
PTPN7-218ENST00000496197 PEX10O60683 326 aa15.75■□□□□ 0.11
PTPN7-218ENST00000496197 TM4SF4P48230 202 aa15.75■□□□□ 0.11
PTPN7-218ENST00000496197 SCRN1Q12765 414 aa15.75■□□□□ 0.11
PTPN7-218ENST00000496197 ANKRD23Q86SG2 305 aa15.75■□□□□ 0.11
PTPN7-218ENST00000496197 IFNL1Q8IU54 200 aa15.75■□□□□ 0.11
PTPN7-218ENST00000496197 DNAJC5GQ8N7S2 189 aa15.75■□□□□ 0.11
PTPN7-218ENST00000496197 NECAB1Q8N987 351 aa15.75■□□□□ 0.11
PTPN7-218ENST00000496197 FANCBQ8NB91 859 aa15.75■□□□□ 0.11
PTPN7-218ENST00000496197 ZNF274Q96GC6 653 aaPredicted RBP15.75■□□□□ 0.11
PTPN7-218ENST00000496197 TANGO6Q9C0B7 1094 aa15.75■□□□□ 0.11
PTPN7-218ENST00000496197 UBA5Q9GZZ9 404 aa15.75■□□□□ 0.11
PTPN7-218ENST00000496197 PCNTO95613 3336 aa15.75■□□□□ 0.11
PTPN7-218ENST00000496197 CYTH3O43739 400 aa15.74■□□□□ 0.11
PTPN7-218ENST00000496197 ST18O60284 1047 aa15.74■□□□□ 0.11
PTPN7-218ENST00000496197 PARP1P09874 1014 aaKnown RBP15.74■□□□□ 0.11
PTPN7-218ENST00000496197 CYP2C8P10632 490 aa15.74■□□□□ 0.11
PTPN7-218ENST00000496197 HOXA7P31268 230 aaPredicted RBP15.74■□□□□ 0.11
PTPN7-218ENST00000496197 ADD1P35611 737 aaKnown RBP15.74■□□□□ 0.11
PTPN7-218ENST00000496197 METAP2P50579 478 aaKnown RBP eCLIP15.74■□□□□ 0.11
PTPN7-218ENST00000496197 ANKRD1Q15327 319 aa15.74■□□□□ 0.11
PTPN7-218ENST00000496197 MAP3K14Q99558 947 aa15.74■□□□□ 0.11
PTPN7-218ENST00000496197 ASCC2Q9H1I8 757 aaPredicted RBP15.74■□□□□ 0.11
PTPN7-218ENST00000496197 ISY1Q9ULR0 285 aaKnown RBP15.74■□□□□ 0.11
PTPN7-218ENST00000496197 ZSWIM8A7E2V4 1837 aa15.74■□□□□ 0.11
PTPN7-218ENST00000496197 CEP350Q5VT06 3117 aa15.74■□□□□ 0.11
PTPN7-218ENST00000496197 USP17L15C9J2P7 530 aa15.73■□□□□ 0.11
PTPN7-218ENST00000496197 USP17L13C9JLJ4 530 aa15.73■□□□□ 0.11
PTPN7-218ENST00000496197 USP17L11C9JVI0 530 aa15.73■□□□□ 0.11
PTPN7-218ENST00000496197 USP17L18D6R9N7 530 aa15.73■□□□□ 0.11
PTPN7-218ENST00000496197 USP17L22D6RA61 530 aa15.73■□□□□ 0.11
PTPN7-218ENST00000496197 USP17L17D6RBQ6 530 aa15.73■□□□□ 0.11
PTPN7-218ENST00000496197 USP17L19D6RCP7 530 aa15.73■□□□□ 0.11
PTPN7-218ENST00000496197 USP17L20D6RJB6 530 aa15.73■□□□□ 0.11
PTPN7-218ENST00000496197 PPFIA3O75145 1194 aa15.73■□□□□ 0.11
PTPN7-218ENST00000496197 SNAP25P60880 206 aa15.73■□□□□ 0.11
PTPN7-218ENST00000496197 USP17L24Q0WX57 530 aa15.73■□□□□ 0.11
PTPN7-218ENST00000496197 ASPRV1Q53RT3 343 aa15.73■□□□□ 0.11
PTPN7-218ENST00000496197 SAMD1Q6SPF0 538 aaPredicted RBP15.73■□□□□ 0.11
PTPN7-218ENST00000496197 SRBD1Q8N5C6 995 aaKnown RBP15.73■□□□□ 0.11
PTPN7-218ENST00000496197 P2RX7Q99572 595 aaKnown RBP15.73■□□□□ 0.11
PTPN7-218ENST00000496197 TSHZ2Q9NRE2 1034 aa15.73■□□□□ 0.11
PTPN7-218ENST00000496197 LIMCH1Q9UPQ0 1083 aa15.73■□□□□ 0.11
PTPN7-218ENST00000496197 SPDYE16A6NNV3 312 aaPredicted RBP15.72■□□□□ 0.11
PTPN7-218ENST00000496197 KLRF2D3W0D1 207 aa15.72■□□□□ 0.11
PTPN7-218ENST00000496197 PFKFB2O60825 505 aa15.72■□□□□ 0.11
PTPN7-218ENST00000496197 FLOT1O75955 427 aa15.72■□□□□ 0.11
PTPN7-218ENST00000496197 CALM1P0DP23 149 aa15.72■□□□□ 0.11
PTPN7-218ENST00000496197 CALM2P0DP24 149 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms