RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 ZIC2O95409 532 aaPredicted RBP6.11□□□□□ -1.43
XPA-204ENST00000496104 VARSP26640 1264 aaKnown RBP6.11□□□□□ -1.43
XPA-204ENST00000496104 KLRK1P26718 216 aa6.11□□□□□ -1.43
XPA-204ENST00000496104 TEFQ10587 303 aa6.11□□□□□ -1.43
XPA-204ENST00000496104 RASA3Q14644 834 aa6.11□□□□□ -1.43
XPA-204ENST00000496104 SF3A1Q15459 793 aaKnown RBP6.11□□□□□ -1.43
XPA-204ENST00000496104 LINC01559Q495D7 138 aa6.11□□□□□ -1.43
XPA-204ENST00000496104 PARP10Q53GL7 1025 aa6.11□□□□□ -1.43
XPA-204ENST00000496104 TAF7LQ5H9L4 462 aa6.11□□□□□ -1.43
XPA-204ENST00000496104 HFE2Q6ZVN8 426 aa6.11□□□□□ -1.43
XPA-204ENST00000496104 PPP1R42Q7Z4L9 355 aa6.11□□□□□ -1.43
XPA-204ENST00000496104 GALNT6Q8NCL4 622 aa6.11□□□□□ -1.43
XPA-204ENST00000496104 TRIB2Q92519 343 aa6.11□□□□□ -1.43
XPA-204ENST00000496104 LBHD1Q9BQE6 289 aaPredicted RBP6.11□□□□□ -1.43
XPA-204ENST00000496104 PBX4Q9BYU1 374 aa6.11□□□□□ -1.43
XPA-204ENST00000496104 PDLIM7Q9NR12 457 aa6.11□□□□□ -1.43
XPA-204ENST00000496104 PTPRFP10586 1907 aa6.11□□□□□ -1.43
XPA-204ENST00000496104 ASH1LQ9NR48 2969 aaKnown RBP6.1□□□□□ -1.43
XPA-204ENST00000496104 HMGCRP04035 888 aa6.1□□□□□ -1.43
XPA-204ENST00000496104 FBXO45P0C2W1 286 aa6.1□□□□□ -1.43
XPA-204ENST00000496104 TCF3P15923 654 aa6.1□□□□□ -1.43
XPA-204ENST00000496104 RTP1P59025 263 aa6.1□□□□□ -1.43
XPA-204ENST00000496104 PPIL2Q13356 520 aa6.1□□□□□ -1.43
XPA-204ENST00000496104 SF3B3Q15393 1217 aaKnown RBP6.1□□□□□ -1.43
XPA-204ENST00000496104 TMEM164Q5U3C3 297 aa6.1□□□□□ -1.43
XPA-204ENST00000496104 PHTF2Q8N3S3 785 aa6.1□□□□□ -1.43
XPA-204ENST00000496104 TSC1Q92574 1164 aa6.1□□□□□ -1.43
XPA-204ENST00000496104 UBXN4Q92575 508 aa6.1□□□□□ -1.43
XPA-204ENST00000496104 ITPKCQ96DU7 683 aa6.1□□□□□ -1.43
XPA-204ENST00000496104 PRMT6Q96LA8 375 aaPredicted RBP6.1□□□□□ -1.43
XPA-204ENST00000496104 RNPC3Q96LT9 517 aaKnown RBP6.1□□□□□ -1.43
XPA-204ENST00000496104 GAS2L1Q99501 681 aaPredicted RBP6.1□□□□□ -1.43
XPA-204ENST00000496104 SEC31BQ9NQW1 1179 aa6.1□□□□□ -1.43
XPA-204ENST00000496104 FAM86C1Q9NVL1 165 aa6.1□□□□□ -1.43
XPA-204ENST00000496104 GJD2Q9UKL4 321 aa6.1□□□□□ -1.43
XPA-204ENST00000496104 ZFYVE26Q68DK2 2539 aa6.09□□□□□ -1.43
XPA-204ENST00000496104 FAM208BQ5VWN6 2430 aa6.09□□□□□ -1.43
XPA-204ENST00000496104 ATRNL1Q5VV63 1379 aa6.09□□□□□ -1.43
XPA-204ENST00000496104 MED23Q9ULK4 1368 aa6.09□□□□□ -1.43
XPA-204ENST00000496104 FLNBO75369 2602 aaKnown RBP6.09□□□□□ -1.43
XPA-204ENST00000496104 GNAT3A8MTJ3 354 aa6.09□□□□□ -1.43
XPA-204ENST00000496104 CLSTN1O94985 981 aa6.09□□□□□ -1.43
XPA-204ENST00000496104 F12P00748 615 aaPredicted RBP6.09□□□□□ -1.43
XPA-204ENST00000496104 EIF4G2P78344 907 aaKnown RBP eCLIP6.09□□□□□ -1.43
XPA-204ENST00000496104 SNAPC2Q13487 334 aa6.09□□□□□ -1.43
XPA-204ENST00000496104 PROSER3Q2NL68 480 aa6.09□□□□□ -1.43
XPA-204ENST00000496104 SUPT20HL1Q3ZLR7 823 aa6.09□□□□□ -1.43
XPA-204ENST00000496104 RASIP1Q5U651 963 aa6.09□□□□□ -1.43
XPA-204ENST00000496104 STRIP1Q5VSL9 837 aa6.09□□□□□ -1.43
XPA-204ENST00000496104 ASCL5Q7RTU5 278 aa6.09□□□□□ -1.43
XPA-204ENST00000496104 ERO1BQ86YB8 467 aa6.09□□□□□ -1.43
XPA-204ENST00000496104 PLEKHM2Q8IWE5 1019 aa6.09□□□□□ -1.43
XPA-204ENST00000496104 LINC00528Q8N1L1 170 aa6.09□□□□□ -1.43
XPA-204ENST00000496104 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.09□□□□□ -1.43
XPA-204ENST00000496104 STK32AQ8WU08 396 aa6.09□□□□□ -1.43
XPA-204ENST00000496104 BAP1Q92560 729 aa6.09□□□□□ -1.43
XPA-204ENST00000496104 ZKSCAN4Q969J2 545 aaPredicted RBP6.09□□□□□ -1.43
XPA-204ENST00000496104 UIMC1Q96RL1 719 aa6.09□□□□□ -1.43
XPA-204ENST00000496104 BCL11AQ9H165 835 aa6.09□□□□□ -1.43
XPA-204ENST00000496104 GGA1Q9UJY5 639 aa6.09□□□□□ -1.43
XPA-204ENST00000496104 KCNH4Q9UQ05 1017 aa6.09□□□□□ -1.43
XPA-204ENST00000496104 MYO3BQ8WXR4 1341 aa6.08□□□□□ -1.44
XPA-204ENST00000496104 CYSRT1A8MQ03 144 aa6.08□□□□□ -1.44
XPA-204ENST00000496104 UPP2O95045 317 aa6.08□□□□□ -1.44
XPA-204ENST00000496104 IGFBP4P22692 258 aa6.08□□□□□ -1.44
XPA-204ENST00000496104 CCND3P30281 292 aaPredicted RBP6.08□□□□□ -1.44
XPA-204ENST00000496104 PTSQ03393 145 aa6.08□□□□□ -1.44
XPA-204ENST00000496104 SNX17Q15036 470 aa6.08□□□□□ -1.44
XPA-204ENST00000496104 KRT40Q6A162 431 aa6.08□□□□□ -1.44
XPA-204ENST00000496104 OGFOD1Q8N543 542 aa6.08□□□□□ -1.44
XPA-204ENST00000496104 FAM174AQ8TBP5 190 aa6.08□□□□□ -1.44
XPA-204ENST00000496104 OCSTAMPQ9BR26 566 aa6.08□□□□□ -1.44
XPA-204ENST00000496104 THUMPD2Q9BTF0 503 aaKnown RBP6.08□□□□□ -1.44
XPA-204ENST00000496104 TMEM39BQ9GZU3 492 aa6.08□□□□□ -1.44
XPA-204ENST00000496104 SPEF2Q9C093 1822 aa6.08□□□□□ -1.44
XPA-204ENST00000496104 SH3TC1Q8TE82 1336 aa6.07□□□□□ -1.44
XPA-204ENST00000496104 PHIPQ8WWQ0 1821 aa6.07□□□□□ -1.44
XPA-204ENST00000496104 ZBBXA8MT70 800 aa6.07□□□□□ -1.44
XPA-204ENST00000496104 TNPO2O14787 897 aaKnown RBP6.07□□□□□ -1.44
XPA-204ENST00000496104 CCNYL3P0C7X3 344 aa6.07□□□□□ -1.44
XPA-204ENST00000496104 MYL6BP14649 208 aa6.07□□□□□ -1.44
XPA-204ENST00000496104 RPS8P62241 208 aaKnown RBP6.07□□□□□ -1.44
XPA-204ENST00000496104 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.07□□□□□ -1.44
XPA-204ENST00000496104 LYPD4Q6UWN0 246 aa6.07□□□□□ -1.44
XPA-204ENST00000496104 KIF6Q6ZMV9 814 aa6.07□□□□□ -1.44
XPA-204ENST00000496104 C16orf59Q7L2K0 433 aa6.07□□□□□ -1.44
XPA-204ENST00000496104 CERS3Q8IU89 383 aa6.07□□□□□ -1.44
XPA-204ENST00000496104 ZNF511Q8NB15 262 aa6.07□□□□□ -1.44
XPA-204ENST00000496104 CCER1Q8TC90 406 aaPredicted RBP6.07□□□□□ -1.44
XPA-204ENST00000496104 KRTAP4-12Q9BQ66 201 aa6.07□□□□□ -1.44
XPA-204ENST00000496104 VEZTQ9HBM0 779 aa6.07□□□□□ -1.44
XPA-204ENST00000496104 YBX2Q9Y2T7 364 aaKnown RBP6.07□□□□□ -1.44
XPA-204ENST00000496104 RRP7AQ9Y3A4 280 aaKnown RBP6.07□□□□□ -1.44
XPA-204ENST00000496104 SPTBN2O15020 2390 aa6.07□□□□□ -1.44
XPA-204ENST00000496104 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.06□□□□□ -1.44
XPA-204ENST00000496104 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.06□□□□□ -1.44
XPA-204ENST00000496104 EPOPA6NHQ4 379 aa6.06□□□□□ -1.44
XPA-204ENST00000496104 ZZEF1O43149 2961 aa6.06□□□□□ -1.44
XPA-204ENST00000496104 INPP5BP32019 993 aa6.06□□□□□ -1.44
XPA-204ENST00000496104 ACAP1Q15027 740 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms