RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 GMCL1P1Q8NEA9 526 aa20.88■□□□□ 0.93
HDAC4-211ENST00000494800 ATG4CQ96DT6 458 aa20.88■□□□□ 0.93
HDAC4-211ENST00000494800 STX8Q9UNK0 236 aa20.88■□□□□ 0.93
HDAC4-211ENST00000494800 RRP12Q5JTH9 1297 aaKnown RBP20.87■□□□□ 0.93
HDAC4-211ENST00000494800 MFSD6Q6ZSS7 791 aa20.87■□□□□ 0.93
HDAC4-211ENST00000494800 SHCBP1Q8NEM2 672 aa20.87■□□□□ 0.93
HDAC4-211ENST00000494800 SLF1Q9BQI6 1058 aa20.87■□□□□ 0.93
HDAC4-211ENST00000494800 MROH8Q9H579 483 aa20.87■□□□□ 0.93
HDAC4-211ENST00000494800 CTNNA3Q9UI47 895 aa20.87■□□□□ 0.93
HDAC4-211ENST00000494800 PPP1R9AQ9ULJ8 1098 aa20.87■□□□□ 0.93
HDAC4-211ENST00000494800 CTDP1Q9Y5B0 961 aaPredicted RBP20.87■□□□□ 0.93
HDAC4-211ENST00000494800 CENPFP49454 3210 aa20.87■□□□□ 0.93
HDAC4-211ENST00000494800 RAD50Q92878 1312 aa20.86■□□□□ 0.93
HDAC4-211ENST00000494800 SLC15A5A6NIM6 579 aa20.86■□□□□ 0.93
HDAC4-211ENST00000494800 FGRP09769 529 aa20.86■□□□□ 0.93
HDAC4-211ENST00000494800 ZKSCAN1P17029 563 aaPredicted RBP20.86■□□□□ 0.93
HDAC4-211ENST00000494800 EN2P19622 333 aaPredicted RBP20.86■□□□□ 0.93
HDAC4-211ENST00000494800 NT5C2P49902 561 aa20.86■□□□□ 0.93
HDAC4-211ENST00000494800 HAND2P61296 217 aa20.86■□□□□ 0.93
HDAC4-211ENST00000494800 MORN1Q5T089 497 aa20.86■□□□□ 0.93
HDAC4-211ENST00000494800 AKNAD1Q5T1N1 836 aa20.86■□□□□ 0.93
HDAC4-211ENST00000494800 LRRC47Q8N1G4 583 aaKnown RBP20.86■□□□□ 0.93
HDAC4-211ENST00000494800 APBA2Q99767 749 aa20.86■□□□□ 0.93
HDAC4-211ENST00000494800 DSCC1Q9BVC3 393 aa20.86■□□□□ 0.93
HDAC4-211ENST00000494800 MOV10L1Q9BXT6 1211 aaKnown RBP20.86■□□□□ 0.93
HDAC4-211ENST00000494800 ISY1Q9ULR0 285 aaKnown RBP20.86■□□□□ 0.93
HDAC4-211ENST00000494800 RBBP6Q7Z6E9 1792 aaKnown RBP20.86■□□□□ 0.93
HDAC4-211ENST00000494800 STRNO43815 780 aa20.85■□□□□ 0.93
HDAC4-211ENST00000494800 SLC25A27O95847 323 aa20.85■□□□□ 0.93
HDAC4-211ENST00000494800 GJB1P08034 283 aa20.85■□□□□ 0.93
HDAC4-211ENST00000494800 CAPN2P17655 700 aa20.85■□□□□ 0.93
HDAC4-211ENST00000494800 PTPREP23469 700 aa20.85■□□□□ 0.93
HDAC4-211ENST00000494800 COPB2P35606 906 aa20.85■□□□□ 0.93
HDAC4-211ENST00000494800 MAP2K5Q13163 448 aa20.85■□□□□ 0.93
HDAC4-211ENST00000494800 SLFN13Q68D06 897 aa20.85■□□□□ 0.93
HDAC4-211ENST00000494800 PRPF38AQ8NAV1 312 aaKnown RBP20.85■□□□□ 0.93
HDAC4-211ENST00000494800 NUP88Q99567 741 aaPredicted RBP20.85■□□□□ 0.93
HDAC4-211ENST00000494800 INCENPQ9NQS7 918 aa20.85■□□□□ 0.93
HDAC4-211ENST00000494800 FBXO28Q9NVF7 368 aa20.85■□□□□ 0.93
HDAC4-211ENST00000494800 VWA5AO00534 786 aa20.84■□□□□ 0.93
HDAC4-211ENST00000494800 NEFLP07196 543 aa20.84■□□□□ 0.93
HDAC4-211ENST00000494800 ERCC3P19447 782 aa20.84■□□□□ 0.93
HDAC4-211ENST00000494800 IMMTQ16891 758 aaKnown RBP20.84■□□□□ 0.93
HDAC4-211ENST00000494800 NCAPG2Q86XI2 1143 aa20.84■□□□□ 0.93
HDAC4-211ENST00000494800 STAG1Q8WVM7 1258 aa20.84■□□□□ 0.93
HDAC4-211ENST00000494800 UNC93B1Q9H1C4 597 aa20.84■□□□□ 0.93
HDAC4-211ENST00000494800 SLC5A4Q9NY91 659 aa20.84■□□□□ 0.93
HDAC4-211ENST00000494800 FEM1BQ9UK73 627 aa20.84■□□□□ 0.93
HDAC4-211ENST00000494800 ADAMTS5Q9UNA0 930 aa20.84■□□□□ 0.93
HDAC4-211ENST00000494800 ZBED4O75132 1171 aa20.83■□□□□ 0.93
HDAC4-211ENST00000494800 BMP3P12645 472 aa20.83■□□□□ 0.93
HDAC4-211ENST00000494800 GJA8P48165 433 aa20.83■□□□□ 0.93
HDAC4-211ENST00000494800 GRB14Q14449 540 aa20.83■□□□□ 0.93
HDAC4-211ENST00000494800 TMEM132BQ14DG7 1078 aa20.83■□□□□ 0.93
HDAC4-211ENST00000494800 DPP9Q86TI2 863 aa20.83■□□□□ 0.93
HDAC4-211ENST00000494800 ESR2Q92731 530 aa20.83■□□□□ 0.93
HDAC4-211ENST00000494800 USP6NLQ92738 828 aa20.83■□□□□ 0.93
HDAC4-211ENST00000494800 GMCL1Q96IK5 515 aa20.83■□□□□ 0.93
HDAC4-211ENST00000494800 HMX1Q9NP08 348 aaPredicted RBP20.83■□□□□ 0.93
HDAC4-211ENST00000494800 A0A0G2JMZ2 1700 aa20.82■□□□□ 0.92
HDAC4-211ENST00000494800 SLC1A4P43007 532 aa20.82■□□□□ 0.92
HDAC4-211ENST00000494800 IKQ13123 557 aaPredicted RBP20.82■□□□□ 0.92
HDAC4-211ENST00000494800 TRIB2Q92519 343 aa20.82■□□□□ 0.92
HDAC4-211ENST00000494800 IL17RBQ9NRM6 502 aa20.82■□□□□ 0.92
HDAC4-211ENST00000494800 TCP11L1Q9NUJ3 509 aa20.82■□□□□ 0.92
HDAC4-211ENST00000494800 RPTORQ8N122 1335 aa20.81■□□□□ 0.92
HDAC4-211ENST00000494800 NMT2O60551 498 aa20.81■□□□□ 0.92
HDAC4-211ENST00000494800 FDX1P10109 184 aa20.81■□□□□ 0.92
HDAC4-211ENST00000494800 FCER1AP12319 257 aa20.81■□□□□ 0.92
HDAC4-211ENST00000494800 CHMLP26374 656 aa20.81■□□□□ 0.92
HDAC4-211ENST00000494800 STAT3P40763 770 aa20.81■□□□□ 0.92
HDAC4-211ENST00000494800 STAT2P52630 851 aa20.81■□□□□ 0.92
HDAC4-211ENST00000494800 RIOX2Q8IUF8 465 aa20.81■□□□□ 0.92
HDAC4-211ENST00000494800 ABRAQ8N0Z2 381 aa20.81■□□□□ 0.92
HDAC4-211ENST00000494800 U2AF1L4Q8WU68 220 aaKnown RBP20.81■□□□□ 0.92
HDAC4-211ENST00000494800 CHURC1Q8WUH1 139 aa20.81■□□□□ 0.92
HDAC4-211ENST00000494800 KIFC2Q96AC6 838 aa20.81■□□□□ 0.92
HDAC4-211ENST00000494800 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.81■□□□□ 0.92
HDAC4-211ENST00000494800 SGPL1O95470 568 aa20.8■□□□□ 0.92
HDAC4-211ENST00000494800 HOXC6P09630 235 aa20.8■□□□□ 0.92
HDAC4-211ENST00000494800 PRKAR2AP13861 404 aaKnown RBP20.8■□□□□ 0.92
HDAC4-211ENST00000494800 ADORA2AP29274 412 aa20.8■□□□□ 0.92
HDAC4-211ENST00000494800 CCDC178Q5BJE1 867 aa20.8■□□□□ 0.92
HDAC4-211ENST00000494800 MFSD14CQ5VZR4 134 aa20.8■□□□□ 0.92
HDAC4-211ENST00000494800 FAM160B2Q86V87 743 aa20.8■□□□□ 0.92
HDAC4-211ENST00000494800 TBC1D10CQ8IV04 446 aa20.8■□□□□ 0.92
HDAC4-211ENST00000494800 DEFB118Q96PH6 123 aa20.8■□□□□ 0.92
HDAC4-211ENST00000494800 TEX13BQ9BXU2 312 aa20.8■□□□□ 0.92
HDAC4-211ENST00000494800 PAK6Q9NQU5 681 aaPredicted RBP20.8■□□□□ 0.92
HDAC4-211ENST00000494800 MYH4Q9Y623 1939 aa20.79■□□□□ 0.92
HDAC4-211ENST00000494800 TMEM232C9JQI7 657 aa20.79■□□□□ 0.92
HDAC4-211ENST00000494800 TFRCP02786 760 aaKnown RBP20.79■□□□□ 0.92
HDAC4-211ENST00000494800 TOP1P11387 765 aaKnown RBP20.79■□□□□ 0.92
HDAC4-211ENST00000494800 MCCP23508 829 aa20.79■□□□□ 0.92
HDAC4-211ENST00000494800 KCTD2Q14681 263 aa20.79■□□□□ 0.92
HDAC4-211ENST00000494800 IQCA1Q86XH1 822 aa20.79■□□□□ 0.92
HDAC4-211ENST00000494800 CCDC136Q96JN2 1154 aa20.79■□□□□ 0.92
HDAC4-211ENST00000494800 TTC14Q96N46 770 aa20.79■□□□□ 0.92
HDAC4-211ENST00000494800 NBPF3Q9H094 633 aa20.79■□□□□ 0.92
HDAC4-211ENST00000494800 CNNM2Q9H8M5 875 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms