RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 BAZ2AQ9UIF9 1905 aaKnown RBP17.31■□□□□ 0.36
SDF4-207ENST00000494748 PDE2AO00408 941 aaPredicted RBP17.31■□□□□ 0.36
SDF4-207ENST00000494748 GGCXP38435 758 aa17.31■□□□□ 0.36
SDF4-207ENST00000494748 GSPT2Q8IYD1 628 aaKnown RBP17.31■□□□□ 0.36
SDF4-207ENST00000494748 ACBD3Q9H3P7 528 aa17.31■□□□□ 0.36
SDF4-207ENST00000494748 DUOX1Q9NRD9 1551 aa17.31■□□□□ 0.36
SDF4-207ENST00000494748 RCCD1A6NED2 376 aa17.31■□□□□ 0.36
SDF4-207ENST00000494748 ERVV-2B6SEH9 535 aa17.31■□□□□ 0.36
SDF4-207ENST00000494748 AKAP17AQ02040 695 aaKnown RBP17.31■□□□□ 0.36
SDF4-207ENST00000494748 MAGEB6Q8N7X4 407 aa17.31■□□□□ 0.36
SDF4-207ENST00000494748 PPM1EQ8WY54 764 aa17.31■□□□□ 0.36
SDF4-207ENST00000494748 YY1AP1Q9H869 796 aa17.31■□□□□ 0.36
SDF4-207ENST00000494748 LCORLQ8N3X6 602 aa17.3■□□□□ 0.36
SDF4-207ENST00000494748 ZNF507Q8TCN5 953 aa17.3■□□□□ 0.36
SDF4-207ENST00000494748 MTA3Q9BTC8 594 aa17.3■□□□□ 0.36
SDF4-207ENST00000494748 JRKLQ9Y4A0 524 aa17.3■□□□□ 0.36
SDF4-207ENST00000494748 SLIT2O94813 1529 aa17.3■□□□□ 0.36
SDF4-207ENST00000494748 SMIM22K7EJ46 135 aa17.3■□□□□ 0.36
SDF4-207ENST00000494748 PRDM1O75626 825 aa17.3■□□□□ 0.36
SDF4-207ENST00000494748 ATP2C1P98194 919 aaPredicted RBP17.3■□□□□ 0.36
SDF4-207ENST00000494748 GOLGA6L1Q8N7Z2 621 aa17.3■□□□□ 0.36
SDF4-207ENST00000494748 HAUS4Q9H6D7 363 aa17.3■□□□□ 0.36
SDF4-207ENST00000494748 ZMYND10O75800 440 aa17.3■□□□□ 0.36
SDF4-207ENST00000494748 PAK1Q13153 545 aa17.29■□□□□ 0.36
SDF4-207ENST00000494748 RRP12Q5JTH9 1297 aaKnown RBP17.29■□□□□ 0.36
SDF4-207ENST00000494748 RRAGBQ5VZM2 374 aa17.29■□□□□ 0.36
SDF4-207ENST00000494748 NELFBQ8WX92 580 aa17.29■□□□□ 0.36
SDF4-207ENST00000494748 SAR1BQ9Y6B6 198 aa17.29■□□□□ 0.36
SDF4-207ENST00000494748 RASSF10A6NK89 507 aa17.29■□□□□ 0.36
SDF4-207ENST00000494748 CTSWP56202 376 aa17.29■□□□□ 0.36
SDF4-207ENST00000494748 NKX1-1Q15270 411 aaPredicted RBP17.29■□□□□ 0.36
SDF4-207ENST00000494748 CCNI2Q6ZMN8 369 aaPredicted RBP17.29■□□□□ 0.36
SDF4-207ENST00000494748 EFCAB13Q8IY85 973 aa17.29■□□□□ 0.36
SDF4-207ENST00000494748 RREB1Q92766 1687 aa17.29■□□□□ 0.36
SDF4-207ENST00000494748 ADAMTS3O15072 1205 aa17.29■□□□□ 0.36
SDF4-207ENST00000494748 KRT2P35908 639 aa17.29■□□□□ 0.36
SDF4-207ENST00000494748 STIM1Q13586 685 aa17.29■□□□□ 0.36
SDF4-207ENST00000494748 RASGRF1Q13972 1273 aa17.29■□□□□ 0.36
SDF4-207ENST00000494748 SPATA5Q8NB90 893 aa17.29■□□□□ 0.36
SDF4-207ENST00000494748 GDAP1L1Q96MZ0 367 aa17.29■□□□□ 0.36
SDF4-207ENST00000494748 PURBQ96QR8 312 aaKnown RBP17.29■□□□□ 0.36
SDF4-207ENST00000494748 SELENOOQ9BVL4 669 aa17.29■□□□□ 0.36
SDF4-207ENST00000494748 GRIN2DO15399 1336 aa17.28■□□□□ 0.36
SDF4-207ENST00000494748 PCDH11XQ9BZA7 1347 aa17.28■□□□□ 0.36
SDF4-207ENST00000494748 PCDH11YQ9BZA8 1340 aa17.28■□□□□ 0.36
SDF4-207ENST00000494748 CCDC196A0A1B0GTZ2 297 aa17.28■□□□□ 0.36
SDF4-207ENST00000494748 hCG_1642624A0A1W2PR95 340 aa17.28■□□□□ 0.36
SDF4-207ENST00000494748 GUCY2CP25092 1073 aa17.28■□□□□ 0.36
SDF4-207ENST00000494748 ZNF174Q15697 407 aa17.28■□□□□ 0.36
SDF4-207ENST00000494748 MEA1Q16626 185 aa17.28■□□□□ 0.36
SDF4-207ENST00000494748 AENQ8WTP8 325 aaKnown RBP17.28■□□□□ 0.36
SDF4-207ENST00000494748 TTYH3Q9C0H2 523 aa17.28■□□□□ 0.36
SDF4-207ENST00000494748 KAT14Q9H8E8 782 aa17.28■□□□□ 0.36
SDF4-207ENST00000494748 PNPLA7Q6ZV29 1317 aa17.28■□□□□ 0.36
SDF4-207ENST00000494748 ZNF185O15231 689 aa17.28■□□□□ 0.36
SDF4-207ENST00000494748 PMS1P54277 932 aaKnown RBP17.28■□□□□ 0.36
SDF4-207ENST00000494748 SPAG1Q07617 926 aa17.28■□□□□ 0.36
SDF4-207ENST00000494748 HLFQ16534 295 aa17.28■□□□□ 0.36
SDF4-207ENST00000494748 ZNF658Q5TYW1 1059 aaPredicted RBP17.28■□□□□ 0.36
SDF4-207ENST00000494748 MB21D1Q8N884 522 aa17.28■□□□□ 0.36
SDF4-207ENST00000494748 NUP133Q8WUM0 1156 aa17.28■□□□□ 0.36
SDF4-207ENST00000494748 LACRTQ9GZZ8 138 aa17.28■□□□□ 0.36
SDF4-207ENST00000494748 GDAQ9Y2T3 454 aa17.28■□□□□ 0.36
SDF4-207ENST00000494748 EXOC5O00471 708 aa17.27■□□□□ 0.36
SDF4-207ENST00000494748 UQCRFS1P1P0C7P4 283 aa17.27■□□□□ 0.36
SDF4-207ENST00000494748 PRCPP42785 496 aa17.27■□□□□ 0.36
SDF4-207ENST00000494748 CNNM1Q9NRU3 951 aa17.27■□□□□ 0.36
SDF4-207ENST00000494748 CAPN11Q9UMQ6 739 aa17.27■□□□□ 0.36
SDF4-207ENST00000494748 CICQ96RK0 1608 aaPredicted RBP17.27■□□□□ 0.36
SDF4-207ENST00000494748 MYH10P35580 1976 aa17.27■□□□□ 0.36
SDF4-207ENST00000494748 GTPBP6O43824 516 aaPredicted RBP17.27■□□□□ 0.36
SDF4-207ENST00000494748 UBXN1Q04323 297 aa17.27■□□□□ 0.36
SDF4-207ENST00000494748 PTGDRQ13258 359 aa17.27■□□□□ 0.36
SDF4-207ENST00000494748 TADA2BQ86TJ2 420 aa17.27■□□□□ 0.36
SDF4-207ENST00000494748 NLRP10Q86W26 655 aa17.27■□□□□ 0.36
SDF4-207ENST00000494748 OR8K1Q8NGG5 319 aa17.27■□□□□ 0.36
SDF4-207ENST00000494748 KAT2BQ92831 832 aa17.27■□□□□ 0.36
SDF4-207ENST00000494748 PLEKHA8P1O95397 391 aa17.27■□□□□ 0.35
SDF4-207ENST00000494748 GTF2A1P52655 376 aaPredicted RBP17.27■□□□□ 0.35
SDF4-207ENST00000494748 EHD4Q9H223 541 aa17.27■□□□□ 0.35
SDF4-207ENST00000494748 BRMS1Q9HCU9 246 aa17.27■□□□□ 0.35
SDF4-207ENST00000494748 TRIM49BA6NDI0 452 aa17.26■□□□□ 0.35
SDF4-207ENST00000494748 LGALS16A8MUM7 142 aa17.26■□□□□ 0.35
SDF4-207ENST00000494748 PARP1P09874 1014 aaKnown RBP17.26■□□□□ 0.35
SDF4-207ENST00000494748 DNAJC21Q5F1R6 531 aaKnown RBP17.26■□□□□ 0.35
SDF4-207ENST00000494748 SUGP1Q8IWZ8 645 aaKnown RBP17.26■□□□□ 0.35
SDF4-207ENST00000494748 TMTC2Q8N394 836 aa17.26■□□□□ 0.35
SDF4-207ENST00000494748 CAPZA3Q96KX2 299 aa17.26■□□□□ 0.35
SDF4-207ENST00000494748 PDS5AQ29RF7 1337 aaKnown RBP17.26■□□□□ 0.35
SDF4-207ENST00000494748 CACNA1SQ13698 1873 aa17.26■□□□□ 0.35
SDF4-207ENST00000494748 A0A1W2PQC6 194 aa17.26■□□□□ 0.35
SDF4-207ENST00000494748 ANKRD18BA2A2Z9 1011 aa17.26■□□□□ 0.35
SDF4-207ENST00000494748 PRPF3O43395 683 aaKnown RBP17.26■□□□□ 0.35
SDF4-207ENST00000494748 MAP9Q49MG5 647 aa17.26■□□□□ 0.35
SDF4-207ENST00000494748 JAKMIP2Q96AA8 810 aa17.26■□□□□ 0.35
SDF4-207ENST00000494748 A0A1B0GUL6 1792 aa17.26■□□□□ 0.35
SDF4-207ENST00000494748 BAZ2BQ9UIF8 2168 aaKnown RBP17.26■□□□□ 0.35
SDF4-207ENST00000494748 MCM3P25205 808 aa17.26■□□□□ 0.35
SDF4-207ENST00000494748 IRAK1P51617 712 aa17.26■□□□□ 0.35
SDF4-207ENST00000494748 SART3Q15020 963 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms