RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 SYKP43405 635 aa18.96■□□□□ 0.63
ATG4B-225ENST00000494465 TIGD1Q96MW7 591 aa18.96■□□□□ 0.63
ATG4B-225ENST00000494465 SDF4Q9BRK5 362 aa18.96■□□□□ 0.63
ATG4B-225ENST00000494465 CBX8Q9HC52 389 aa18.96■□□□□ 0.63
ATG4B-225ENST00000494465 BARHL2Q9NY43 387 aa18.96■□□□□ 0.63
ATG4B-225ENST00000494465 PIM2Q9P1W9 311 aa18.96■□□□□ 0.63
ATG4B-225ENST00000494465 USP25Q9UHP3 1055 aa18.96■□□□□ 0.63
ATG4B-225ENST00000494465 CEP131Q9UPN4 1083 aa18.96■□□□□ 0.63
ATG4B-225ENST00000494465 SRPRBQ9Y5M8 271 aaKnown RBP18.96■□□□□ 0.63
ATG4B-225ENST00000494465 ATRNL1Q5VV63 1379 aa18.96■□□□□ 0.63
ATG4B-225ENST00000494465 FAM196BA6NMK8 535 aa18.96■□□□□ 0.63
ATG4B-225ENST00000494465 METTL16Q86W50 562 aaKnown RBP18.96■□□□□ 0.63
ATG4B-225ENST00000494465 BLIDQ8IZY5 108 aa18.96■□□□□ 0.63
ATG4B-225ENST00000494465 DNAJC25Q9H1X3 360 aa18.96■□□□□ 0.63
ATG4B-225ENST00000494465 CLIP2Q9UDT6 1046 aa18.96■□□□□ 0.63
ATG4B-225ENST00000494465 PCDHA4Q9UN74 947 aa18.96■□□□□ 0.63
ATG4B-225ENST00000494465 AP5Z1O43299 807 aa18.95■□□□□ 0.62
ATG4B-225ENST00000494465 ZNF579Q8NAF0 562 aaKnown RBP18.95■□□□□ 0.62
ATG4B-225ENST00000494465 CCDC17Q96LX7 622 aa18.95■□□□□ 0.62
ATG4B-225ENST00000494465 MTFR1LQ9H019 292 aa18.95■□□□□ 0.62
ATG4B-225ENST00000494465 COL2A1P02458 1487 aaPredicted RBP18.95■□□□□ 0.62
ATG4B-225ENST00000494465 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.95■□□□□ 0.62
ATG4B-225ENST00000494465 ENTPD3O75355 529 aa18.95■□□□□ 0.62
ATG4B-225ENST00000494465 SHROOM1Q2M3G4 852 aaPredicted RBP18.95■□□□□ 0.62
ATG4B-225ENST00000494465 SOGA3Q5TF21 947 aa18.95■□□□□ 0.62
ATG4B-225ENST00000494465 TATDN1Q6P1N9 297 aa18.95■□□□□ 0.62
ATG4B-225ENST00000494465 PIK3AP1Q6ZUJ8 805 aa18.95■□□□□ 0.62
ATG4B-225ENST00000494465 LUZP1Q86V48 1076 aa18.95■□□□□ 0.62
ATG4B-225ENST00000494465 DAGLBQ8NCG7 672 aa18.95■□□□□ 0.62
ATG4B-225ENST00000494465 RIOX1Q9H6W3 641 aa18.95■□□□□ 0.62
ATG4B-225ENST00000494465 NOL7Q9UMY1 257 aaKnown RBP18.95■□□□□ 0.62
ATG4B-225ENST00000494465 SPECC1Q5M775 1068 aa18.94■□□□□ 0.62
ATG4B-225ENST00000494465 HEATR3Q7Z4Q2 680 aa18.94■□□□□ 0.62
ATG4B-225ENST00000494465 KIAA1468Q9P260 1216 aa18.94■□□□□ 0.62
ATG4B-225ENST00000494465 A0A087WWV3 80 aa18.93■□□□□ 0.62
ATG4B-225ENST00000494465 SPDYE2BA6NHP3 402 aa18.93■□□□□ 0.62
ATG4B-225ENST00000494465 SPDYE6P0CI01 402 aa18.93■□□□□ 0.62
ATG4B-225ENST00000494465 STX1AQ16623 288 aa18.93■□□□□ 0.62
ATG4B-225ENST00000494465 TTC38Q5R3I4 469 aa18.93■□□□□ 0.62
ATG4B-225ENST00000494465 C11orf57Q6ZUT1 292 aaPredicted RBP18.93■□□□□ 0.62
ATG4B-225ENST00000494465 ZSCAN29Q8IWY8 852 aaPredicted RBP18.93■□□□□ 0.62
ATG4B-225ENST00000494465 FAM177A1Q8N128 213 aaPredicted RBP18.93■□□□□ 0.62
ATG4B-225ENST00000494465 TRIM44Q96DX7 344 aaPredicted RBP18.93■□□□□ 0.62
ATG4B-225ENST00000494465 KCNH3Q9ULD8 1083 aa18.93■□□□□ 0.62
ATG4B-225ENST00000494465 ZBTB12Q9Y330 459 aaPredicted RBP18.93■□□□□ 0.62
ATG4B-225ENST00000494465 FRMPD2Q68DX3 1309 aaPredicted RBP18.93■□□□□ 0.62
ATG4B-225ENST00000494465 MPHOSPH10O00566 681 aaKnown RBP18.93■□□□□ 0.62
ATG4B-225ENST00000494465 TRAPPC10P48553 1259 aa18.93■□□□□ 0.62
ATG4B-225ENST00000494465 ASPRV1Q53RT3 343 aa18.93■□□□□ 0.62
ATG4B-225ENST00000494465 FOXP4Q8IVH2 680 aaPredicted RBP18.93■□□□□ 0.62
ATG4B-225ENST00000494465 UBA5Q9GZZ9 404 aa18.93■□□□□ 0.62
ATG4B-225ENST00000494465 ZNRF3Q9ULT6 936 aa18.93■□□□□ 0.62
ATG4B-225ENST00000494465 CAVIN2O95810 425 aa18.92■□□□□ 0.62
ATG4B-225ENST00000494465 ZNF165P49910 485 aa18.92■□□□□ 0.62
ATG4B-225ENST00000494465 ZNF174Q15697 407 aa18.92■□□□□ 0.62
ATG4B-225ENST00000494465 CCDC148Q8NFR7 591 aa18.92■□□□□ 0.62
ATG4B-225ENST00000494465 RASGRP4Q8TDF6 673 aa18.92■□□□□ 0.62
ATG4B-225ENST00000494465 POLD1P28340 1107 aa18.92■□□□□ 0.62
ATG4B-225ENST00000494465 GALNT17Q6IS24 598 aa18.92■□□□□ 0.62
ATG4B-225ENST00000494465 RRP36Q96EU6 259 aaKnown RBP18.92■□□□□ 0.62
ATG4B-225ENST00000494465 PIGSQ96S52 555 aa18.92■□□□□ 0.62
ATG4B-225ENST00000494465 ZMYND12Q9H0C1 365 aa18.92■□□□□ 0.62
ATG4B-225ENST00000494465 CSRNP2Q9H175 543 aa18.92■□□□□ 0.62
ATG4B-225ENST00000494465 PCDHA6Q9UN73 950 aa18.92■□□□□ 0.62
ATG4B-225ENST00000494465 PCDHA8Q9Y5H6 950 aa18.92■□□□□ 0.62
ATG4B-225ENST00000494465 BMP15O95972 392 aa18.91■□□□□ 0.62
ATG4B-225ENST00000494465 ZNF543Q08ER8 600 aa18.91■□□□□ 0.62
ATG4B-225ENST00000494465 IQCB1Q15051 598 aa18.91■□□□□ 0.62
ATG4B-225ENST00000494465 LONRF3Q496Y0 759 aa18.91■□□□□ 0.62
ATG4B-225ENST00000494465 CERKLQ49MI3 558 aaPredicted RBP18.91■□□□□ 0.62
ATG4B-225ENST00000494465 DALRD3Q5D0E6 543 aaKnown RBP18.91■□□□□ 0.62
ATG4B-225ENST00000494465 ADCY5O95622 1261 aa18.91■□□□□ 0.62
ATG4B-225ENST00000494465 ATP2C1P98194 919 aaPredicted RBP18.91■□□□□ 0.62
ATG4B-225ENST00000494465 USP49Q70CQ1 688 aa18.91■□□□□ 0.62
ATG4B-225ENST00000494465 HOMER1Q86YM7 354 aa18.91■□□□□ 0.62
ATG4B-225ENST00000494465 NIM1KQ8IY84 436 aa18.91■□□□□ 0.62
ATG4B-225ENST00000494465 VAT1LQ9HCJ6 419 aa18.91■□□□□ 0.62
ATG4B-225ENST00000494465 SIAH1Q8IUQ4 282 aa18.9■□□□□ 0.62
ATG4B-225ENST00000494465 MKL1Q969V6 931 aa18.9■□□□□ 0.62
ATG4B-225ENST00000494465 SGIP1Q9BQI5 828 aa18.9■□□□□ 0.62
ATG4B-225ENST00000494465 ANO10Q9NW15 660 aa18.9■□□□□ 0.62
ATG4B-225ENST00000494465 PTGDRQ13258 359 aa18.9■□□□□ 0.62
ATG4B-225ENST00000494465 KRBA2Q6ZNG9 492 aa18.9■□□□□ 0.62
ATG4B-225ENST00000494465 ARFGEF1Q9Y6D6 1849 aa18.9■□□□□ 0.62
ATG4B-225ENST00000494465 CXCL9Q07325 125 aa18.89■□□□□ 0.61
ATG4B-225ENST00000494465 HS1BP3Q53T59 392 aa18.89■□□□□ 0.61
ATG4B-225ENST00000494465 FAM43AQ8N2R8 423 aa18.89■□□□□ 0.61
ATG4B-225ENST00000494465 FERMT2Q96AC1 680 aa18.89■□□□□ 0.61
ATG4B-225ENST00000494465 GPCPD1Q9NPB8 672 aa18.89■□□□□ 0.61
ATG4B-225ENST00000494465 RRAGDQ9NQL2 400 aaPredicted RBP18.89■□□□□ 0.61
ATG4B-225ENST00000494465 FAM13BQ9NYF5 915 aa18.89■□□□□ 0.61
ATG4B-225ENST00000494465 NYAP2Q9P242 653 aa18.89■□□□□ 0.61
ATG4B-225ENST00000494465 ZNF70Q9UC06 446 aaPredicted RBP18.89■□□□□ 0.61
ATG4B-225ENST00000494465 SEC63Q9UGP8 760 aaKnown RBP18.89■□□□□ 0.61
ATG4B-225ENST00000494465 TUBE1Q9UJT0 475 aa18.89■□□□□ 0.61
ATG4B-225ENST00000494465 HDAC9Q9UKV0 1011 aa18.89■□□□□ 0.61
ATG4B-225ENST00000494465 EEF2P13639 858 aaKnown RBP18.89■□□□□ 0.61
ATG4B-225ENST00000494465 NAPAP54920 295 aa18.89■□□□□ 0.61
ATG4B-225ENST00000494465 JAG1P78504 1218 aa18.89■□□□□ 0.61
ATG4B-225ENST00000494465 R3HDM1Q15032 1099 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms