RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 KIAA1683Q9H0B3 1180 aa10.46□□□□□ -0.73
ITGB1-217ENST00000494395 NAPBQ9H115 298 aa10.46□□□□□ -0.73
ITGB1-217ENST00000494395 ANAPC4Q9UJX5 808 aa10.46□□□□□ -0.73
ITGB1-217ENST00000494395 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.46□□□□□ -0.73
ITGB1-217ENST00000494395 PLIN4Q96Q06 1357 aa10.46□□□□□ -0.74
ITGB1-217ENST00000494395 A0A0G2JMZ2 1700 aa10.45□□□□□ -0.74
ITGB1-217ENST00000494395 IGKV6D-41A0A0C4DH26 115 aa10.45□□□□□ -0.74
ITGB1-217ENST00000494395 PPP1R3GB7ZBB8 358 aa10.45□□□□□ -0.74
ITGB1-217ENST00000494395 HIP1O00291 1037 aa10.45□□□□□ -0.74
ITGB1-217ENST00000494395 FGAP02671 866 aa10.45□□□□□ -0.74
ITGB1-217ENST00000494395 APPP05067 770 aa10.45□□□□□ -0.74
ITGB1-217ENST00000494395 CENPBP07199 599 aaPredicted RBP10.45□□□□□ -0.74
ITGB1-217ENST00000494395 CYP2C8P10632 490 aa10.45□□□□□ -0.74
ITGB1-217ENST00000494395 BCRP11274 1271 aa10.45□□□□□ -0.74
ITGB1-217ENST00000494395 HOXA7P31268 230 aaPredicted RBP10.45□□□□□ -0.74
ITGB1-217ENST00000494395 SP3Q02447 781 aa10.45□□□□□ -0.74
ITGB1-217ENST00000494395 PPARAQ07869 468 aa10.45□□□□□ -0.74
ITGB1-217ENST00000494395 RAB3GAP1Q15042 981 aa10.45□□□□□ -0.74
ITGB1-217ENST00000494395 CTU1Q7Z7A3 348 aaKnown RBP10.45□□□□□ -0.74
ITGB1-217ENST00000494395 CLEC10AQ8IUN9 316 aa10.45□□□□□ -0.74
ITGB1-217ENST00000494395 PARK7Q99497 189 aaKnown RBP10.45□□□□□ -0.74
ITGB1-217ENST00000494395 NACAP1Q9BZK3 213 aa10.45□□□□□ -0.74
ITGB1-217ENST00000494395 CABP5Q9NP86 173 aa10.45□□□□□ -0.74
ITGB1-217ENST00000494395 HTTP42858 3142 aa10.45□□□□□ -0.74
ITGB1-217ENST00000494395 MINDY4BA8MYZ0 360 aa10.44□□□□□ -0.74
ITGB1-217ENST00000494395 FGRP09769 529 aa10.44□□□□□ -0.74
ITGB1-217ENST00000494395 CHMLP26374 656 aa10.44□□□□□ -0.74
ITGB1-217ENST00000494395 SSTR3P32745 418 aaPredicted RBP10.44□□□□□ -0.74
ITGB1-217ENST00000494395 KIAA1755Q5JYT7 1200 aa10.44□□□□□ -0.74
ITGB1-217ENST00000494395 USP17L2Q6R6M4 530 aa10.44□□□□□ -0.74
ITGB1-217ENST00000494395 POTEEQ6S8J3 1075 aa10.44□□□□□ -0.74
ITGB1-217ENST00000494395 CWC27Q6UX04 472 aaKnown RBP10.44□□□□□ -0.74
ITGB1-217ENST00000494395 TNS4Q8IZW8 715 aa10.44□□□□□ -0.74
ITGB1-217ENST00000494395 CD99L2Q8TCZ2 262 aa10.44□□□□□ -0.74
ITGB1-217ENST00000494395 MCOLN1Q9GZU1 580 aa10.44□□□□□ -0.74
ITGB1-217ENST00000494395 NBPF3Q9H094 633 aa10.44□□□□□ -0.74
ITGB1-217ENST00000494395 ASCC2Q9H1I8 757 aaPredicted RBP10.44□□□□□ -0.74
ITGB1-217ENST00000494395 DIAPH3Q9NSV4 1193 aa10.44□□□□□ -0.74
ITGB1-217ENST00000494395 CPA4Q9UI42 421 aa10.44□□□□□ -0.74
ITGB1-217ENST00000494395 DOCK3Q8IZD9 2030 aa10.43□□□□□ -0.74
ITGB1-217ENST00000494395 RAD50Q92878 1312 aa10.43□□□□□ -0.74
ITGB1-217ENST00000494395 MPHOSPH10O00566 681 aaKnown RBP10.43□□□□□ -0.74
ITGB1-217ENST00000494395 NEFLP07196 543 aa10.43□□□□□ -0.74
ITGB1-217ENST00000494395 CTGFP29279 349 aa10.43□□□□□ -0.74
ITGB1-217ENST00000494395 USP14P54578 494 aa10.43□□□□□ -0.74
ITGB1-217ENST00000494395 MFAP1P55081 439 aaKnown RBP10.43□□□□□ -0.74
ITGB1-217ENST00000494395 ICA1Q05084 483 aa10.43□□□□□ -0.74
ITGB1-217ENST00000494395 CTDSPL2Q05D32 466 aa10.43□□□□□ -0.74
ITGB1-217ENST00000494395 ZYXQ15942 572 aaKnown RBP10.43□□□□□ -0.74
ITGB1-217ENST00000494395 ERICH6BQ5W0A0 696 aa10.43□□□□□ -0.74
ITGB1-217ENST00000494395 OTOP1Q7RTM1 612 aa10.43□□□□□ -0.74
ITGB1-217ENST00000494395 STK11IPQ8N1F8 1099 aa10.43□□□□□ -0.74
ITGB1-217ENST00000494395 ERO1AQ96HE7 468 aa10.43□□□□□ -0.74
ITGB1-217ENST00000494395 CCDC136Q96JN2 1154 aa10.43□□□□□ -0.74
ITGB1-217ENST00000494395 DSCC1Q9BVC3 393 aa10.43□□□□□ -0.74
ITGB1-217ENST00000494395 TMOD4Q9NZQ9 345 aa10.43□□□□□ -0.74
ITGB1-217ENST00000494395 TMX2Q9Y320 296 aa10.43□□□□□ -0.74
ITGB1-217ENST00000494395 PLXNB2O15031 1838 aa10.42□□□□□ -0.74
ITGB1-217ENST00000494395 ORC4O43929 436 aa10.42□□□□□ -0.74
ITGB1-217ENST00000494395 PRDM1O75626 825 aa10.42□□□□□ -0.74
ITGB1-217ENST00000494395 EEF2P13639 858 aaKnown RBP10.42□□□□□ -0.74
ITGB1-217ENST00000494395 VCAM1P19320 739 aa10.42□□□□□ -0.74
ITGB1-217ENST00000494395 LACTBP83111 547 aaPredicted RBP10.42□□□□□ -0.74
ITGB1-217ENST00000494395 PABPC4Q13310 644 aaKnown RBP eCLIP10.42□□□□□ -0.74
ITGB1-217ENST00000494395 FEZ1Q99689 392 aa10.42□□□□□ -0.74
ITGB1-217ENST00000494395 ARHGAP39Q9C0H5 1083 aa10.42□□□□□ -0.74
ITGB1-217ENST00000494395 KANSL2Q9H9L4 492 aa10.42□□□□□ -0.74
ITGB1-217ENST00000494395 MKNK2Q9HBH9 465 aa10.42□□□□□ -0.74
ITGB1-217ENST00000494395 INCENPQ9NQS7 918 aa10.42□□□□□ -0.74
ITGB1-217ENST00000494395 FAM217BQ9NTX9 383 aaPredicted RBP10.42□□□□□ -0.74
ITGB1-217ENST00000494395 NYAP2Q9P242 653 aa10.42□□□□□ -0.74
ITGB1-217ENST00000494395 PNMA3Q9UL41 463 aa10.42□□□□□ -0.74
ITGB1-217ENST00000494395 COL11A1P12107 1806 aaPredicted RBP10.42□□□□□ -0.74
ITGB1-217ENST00000494395 SGSM2O43147 1006 aa10.41□□□□□ -0.74
ITGB1-217ENST00000494395 NOVP48745 357 aa10.41□□□□□ -0.74
ITGB1-217ENST00000494395 PDE4BQ07343 736 aa10.41□□□□□ -0.74
ITGB1-217ENST00000494395 PKN2Q16513 984 aaKnown RBP10.41□□□□□ -0.74
ITGB1-217ENST00000494395 FAM110CQ1W6H9 321 aa10.41□□□□□ -0.74
ITGB1-217ENST00000494395 BMP2KLQ5H9B9 411 aa10.41□□□□□ -0.74
ITGB1-217ENST00000494395 LHX8Q68G74 356 aa10.41□□□□□ -0.74
ITGB1-217ENST00000494395 LBX2Q6XYB7 198 aa10.41□□□□□ -0.74
ITGB1-217ENST00000494395 CATSPERGQ6ZRH7 1159 aa10.41□□□□□ -0.74
ITGB1-217ENST00000494395 TBC1D10CQ8IV04 446 aa10.41□□□□□ -0.74
ITGB1-217ENST00000494395 NEDD1Q8NHV4 660 aa10.41□□□□□ -0.74
ITGB1-217ENST00000494395 NKX2-3Q8TAU0 364 aa10.41□□□□□ -0.74
ITGB1-217ENST00000494395 STAG1Q8WVM7 1258 aa10.41□□□□□ -0.74
ITGB1-217ENST00000494395 ABHD8Q96I13 439 aa10.41□□□□□ -0.74
ITGB1-217ENST00000494395 P2RX7Q99572 595 aaKnown RBP10.41□□□□□ -0.74
ITGB1-217ENST00000494395 VCPKMTQ9H867 229 aa10.41□□□□□ -0.74
ITGB1-217ENST00000494395 ZNF287Q9HBT7 754 aa10.41□□□□□ -0.74
ITGB1-217ENST00000494395 ARHGEF10LQ9HCE6 1279 aa10.41□□□□□ -0.74
ITGB1-217ENST00000494395 MTMR4Q9NYA4 1195 aa10.41□□□□□ -0.74
ITGB1-217ENST00000494395 MORF4L1Q9UBU8 362 aa10.41□□□□□ -0.74
ITGB1-217ENST00000494395 USP17L15C9J2P7 530 aa10.4□□□□□ -0.74
ITGB1-217ENST00000494395 USP17L13C9JLJ4 530 aa10.4□□□□□ -0.74
ITGB1-217ENST00000494395 USP17L11C9JVI0 530 aa10.4□□□□□ -0.74
ITGB1-217ENST00000494395 USP17L18D6R9N7 530 aa10.4□□□□□ -0.74
ITGB1-217ENST00000494395 USP17L22D6RA61 530 aa10.4□□□□□ -0.74
ITGB1-217ENST00000494395 USP17L17D6RBQ6 530 aa10.4□□□□□ -0.74
ITGB1-217ENST00000494395 USP17L19D6RCP7 530 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms