RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 ASIC4Q96FT7 647 aa3.67□□□□□ -1.82
LMNB1-207ENST00000494185 SLC6A18Q96N87 628 aa3.67□□□□□ -1.82
LMNB1-207ENST00000494185 SLC9A7Q96T83 725 aa3.67□□□□□ -1.82
LMNB1-207ENST00000494185 RC3H2Q9HBD1 1191 aaKnown RBP3.67□□□□□ -1.82
LMNB1-207ENST00000494185 MRVI1Q9Y6F6 885 aa3.67□□□□□ -1.82
LMNB1-207ENST00000494185 FAM86C2PA6NEL3 165 aa3.66□□□□□ -1.82
LMNB1-207ENST00000494185 STK10O94804 968 aaKnown RBP3.66□□□□□ -1.82
LMNB1-207ENST00000494185 UBOX5O94941 541 aa3.66□□□□□ -1.82
LMNB1-207ENST00000494185 GSNP06396 782 aa3.66□□□□□ -1.82
LMNB1-207ENST00000494185 ACRP10323 421 aa3.66□□□□□ -1.82
LMNB1-207ENST00000494185 SLC7A5Q01650 507 aa3.66□□□□□ -1.82
LMNB1-207ENST00000494185 FXNQ16595 210 aa3.66□□□□□ -1.82
LMNB1-207ENST00000494185 NKPD1Q17RQ9 610 aa3.66□□□□□ -1.82
LMNB1-207ENST00000494185 GNPTABQ3T906 1256 aa3.66□□□□□ -1.82
LMNB1-207ENST00000494185 OLFML2BQ68BL8 750 aa3.66□□□□□ -1.82
LMNB1-207ENST00000494185 HEATR6Q6AI08 1181 aaKnown RBP3.66□□□□□ -1.82
LMNB1-207ENST00000494185 UNC5AQ6ZN44 842 aa3.66□□□□□ -1.82
LMNB1-207ENST00000494185 ATG4DQ86TL0 474 aaPredicted RBP3.66□□□□□ -1.82
LMNB1-207ENST00000494185 TTC6Q86TZ1 520 aa3.66□□□□□ -1.82
LMNB1-207ENST00000494185 TSPYL5Q86VY4 417 aaPredicted RBP3.66□□□□□ -1.82
LMNB1-207ENST00000494185 CREG2Q8IUH2 290 aa3.66□□□□□ -1.82
LMNB1-207ENST00000494185 HSPA12BQ96MM6 686 aa3.66□□□□□ -1.82
LMNB1-207ENST00000494185 ALPK1Q96QP1 1244 aa3.66□□□□□ -1.82
LMNB1-207ENST00000494185 TRIM55Q9BYV6 548 aa3.66□□□□□ -1.82
LMNB1-207ENST00000494185 ZNF408Q9H9D4 720 aa3.66□□□□□ -1.82
LMNB1-207ENST00000494185 PAK6Q9NQU5 681 aaPredicted RBP3.66□□□□□ -1.82
LMNB1-207ENST00000494185 FAM53CQ9NYF3 392 aa3.66□□□□□ -1.82
LMNB1-207ENST00000494185 ACTR10Q9NZ32 417 aa3.66□□□□□ -1.82
LMNB1-207ENST00000494185 PRKAG3Q9UGI9 489 aa3.66□□□□□ -1.82
LMNB1-207ENST00000494185 TRBV23OR9-2A0A075B6M9 112 aa3.65□□□□□ -1.83
LMNB1-207ENST00000494185 FITM1A5D6W6 292 aa3.65□□□□□ -1.83
LMNB1-207ENST00000494185 NOP56O00567 594 aaKnown RBP3.65□□□□□ -1.83
LMNB1-207ENST00000494185 SMAD7O15105 426 aaKnown RBP3.65□□□□□ -1.83
LMNB1-207ENST00000494185 SIGLEC6O43699 453 aa3.65□□□□□ -1.83
LMNB1-207ENST00000494185 CD8BP10966 210 aa3.65□□□□□ -1.83
LMNB1-207ENST00000494185 GTF2F1P35269 517 aaKnown RBP eCLIP3.65□□□□□ -1.83
LMNB1-207ENST00000494185 ETFBP38117 255 aa3.65□□□□□ -1.83
LMNB1-207ENST00000494185 CASP7P55210 303 aa3.65□□□□□ -1.83
LMNB1-207ENST00000494185 POU4F1Q01851 419 aa3.65□□□□□ -1.83
LMNB1-207ENST00000494185 EGR3Q06889 387 aa3.65□□□□□ -1.83
LMNB1-207ENST00000494185 ZNF792Q3KQV3 632 aa3.65□□□□□ -1.83
LMNB1-207ENST00000494185 FAM214BQ7L5A3 538 aa3.65□□□□□ -1.83
LMNB1-207ENST00000494185 C7orf61Q8IZ16 206 aa3.65□□□□□ -1.83
LMNB1-207ENST00000494185 LILRA2Q8N149 483 aa3.65□□□□□ -1.83
LMNB1-207ENST00000494185 FAM169BQ8N8A8 192 aa3.65□□□□□ -1.83
LMNB1-207ENST00000494185 NAT16Q8N8M0 369 aa3.65□□□□□ -1.83
LMNB1-207ENST00000494185 ANKS4BQ8N8V4 417 aa3.65□□□□□ -1.83
LMNB1-207ENST00000494185 ARMC5Q96C12 935 aa3.65□□□□□ -1.83
LMNB1-207ENST00000494185 HIRIP3Q9BW71 556 aaPredicted RBP3.65□□□□□ -1.83
LMNB1-207ENST00000494185 CARS2Q9HA77 564 aaKnown RBP3.65□□□□□ -1.83
LMNB1-207ENST00000494185 ATP13A1Q9HD20 1204 aa3.65□□□□□ -1.83
LMNB1-207ENST00000494185 CHST7Q9NS84 486 aa3.65□□□□□ -1.83
LMNB1-207ENST00000494185 WHRNQ9P202 907 aa3.65□□□□□ -1.83
LMNB1-207ENST00000494185 TMEM59LQ9UK28 342 aa3.65□□□□□ -1.83
LMNB1-207ENST00000494185 SUGT1Q9Y2Z0 365 aa3.65□□□□□ -1.83
LMNB1-207ENST00000494185 ST14Q9Y5Y6 855 aa3.65□□□□□ -1.83
LMNB1-207ENST00000494185 A0A087WZG4 1122 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 A0A1W2PQ27 194 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 A0A1W2PQ64 194 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 A0A1W2PQC6 194 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 A0A1W2PQD8 194 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 A0A1W2PQH9 124 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 IGSF3O75054 1194 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 GDNFP39905 211 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 ARL4AP40617 200 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 TMEM62Q0P6H9 643 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 AUHQ13825 339 aaKnown RBP3.64□□□□□ -1.83
LMNB1-207ENST00000494185 ZYXQ15942 572 aaKnown RBP3.64□□□□□ -1.83
LMNB1-207ENST00000494185 ANKRD39Q53RE8 183 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 NBPF6Q5VWK0 638 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 VHLLQ6RSH7 139 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 CYP2R1Q6VVX0 501 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 ANKS3Q6ZW76 656 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 ADAT2Q7Z6V5 191 aaKnown RBP3.64□□□□□ -1.83
LMNB1-207ENST00000494185 TMEM192Q8IY95 271 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 ABI1Q8IZP0 508 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 PDZD8Q8NEN9 1154 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 FLAD1Q8NFF5 587 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 NBPF4Q96M43 638 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 DRC1Q96MC2 740 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 EPN3Q9H201 632 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 SLAMF8Q9P0V8 285 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 ZMYM5Q9UJ78 669 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 ZNF214Q9UL59 606 aaPredicted RBP3.64□□□□□ -1.83
LMNB1-207ENST00000494185 PLAGL2Q9UPG8 496 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 DIS3Q9Y2L1 958 aaKnown RBP3.64□□□□□ -1.83
LMNB1-207ENST00000494185 FHOD1Q9Y613 1164 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 CNTNAP4Q9C0A0 1308 aa3.64□□□□□ -1.83
LMNB1-207ENST00000494185 COL17A1Q9UMD9 1497 aaPredicted RBP3.63□□□□□ -1.83
LMNB1-207ENST00000494185 ANKRD34BA5PLL1 514 aa3.63□□□□□ -1.83
LMNB1-207ENST00000494185 IQCA1LA6NCM1 817 aa3.63□□□□□ -1.83
LMNB1-207ENST00000494185 PRR33A8MZF0 331 aa3.63□□□□□ -1.83
LMNB1-207ENST00000494185 BMP8BP34820 402 aa3.63□□□□□ -1.83
LMNB1-207ENST00000494185 SNX17Q15036 470 aa3.63□□□□□ -1.83
LMNB1-207ENST00000494185 SLC14A2Q15849 920 aa3.63□□□□□ -1.83
LMNB1-207ENST00000494185 KCNMB1Q16558 191 aa3.63□□□□□ -1.83
LMNB1-207ENST00000494185 LARP1BQ659C4 914 aaKnown RBP3.63□□□□□ -1.83
LMNB1-207ENST00000494185 EEPD1Q7L9B9 569 aa3.63□□□□□ -1.83
LMNB1-207ENST00000494185 KSR1Q8IVT5 923 aa3.63□□□□□ -1.83
LMNB1-207ENST00000494185 LINC00116Q8NCU8 138 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms