RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 FLOT2Q14254 428 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 TMCO5AQ8N6Q1 288 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 RNF217Q8TC41 542 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 BCAS4Q8TDM0 211 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 GIPC2Q8TF65 315 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 SMYD2Q9NRG4 433 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 TPCN1Q9ULQ1 816 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 PHF8Q9UPP1 1060 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 SATB2Q9UPW6 733 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 C9orf84Q5VXU9 1444 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 EIF3CLB5ME19 914 aaKnown RBP8.61□□□□□ -1.03
BRCA1-221ENST00000493795 DDX39AO00148 427 aaKnown RBP8.61□□□□□ -1.03
BRCA1-221ENST00000493795 PPP1R12AO14974 1030 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-221ENST00000493795 POLR2DO15514 142 aaKnown RBP8.61□□□□□ -1.03
BRCA1-221ENST00000493795 IGHDP01880 384 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 ZFXP17010 805 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-221ENST00000493795 EEF1GP26641 437 aaKnown RBP8.61□□□□□ -1.03
BRCA1-221ENST00000493795 KPNA2P52292 529 aaKnown RBP8.61□□□□□ -1.03
BRCA1-221ENST00000493795 BFSP1Q12934 665 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 CAPN12Q6ZSI9 719 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 SCYL3Q8IZE3 742 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 NME8Q8N427 588 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 EIF3CQ99613 913 aaKnown RBP8.61□□□□□ -1.03
BRCA1-221ENST00000493795 CCPG1Q9ULG6 757 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 PASKQ96RG2 1323 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 ZRANB2O95218 330 aaKnown RBP eCLIP8.61□□□□□ -1.03
BRCA1-221ENST00000493795 INHBAP08476 426 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 MTX1Q13505 466 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 ATG16L1Q676U5 607 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 SPZ1Q9BXG8 430 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 TRIM55Q9BYV6 548 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 NIP7Q9Y221 180 aaKnown RBP eCLIP8.61□□□□□ -1.03
BRCA1-221ENST00000493795 ZBED4O75132 1171 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 RPSAP08865 295 aaKnown RBP8.61□□□□□ -1.03
BRCA1-221ENST00000493795 POLE2P56282 527 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 YWHAGP61981 247 aaKnown RBP eCLIP8.61□□□□□ -1.03
BRCA1-221ENST00000493795 PDE1BQ01064 536 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 NBPF14Q5TI25 921 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 BBS5Q8N3I7 341 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 PRPF38AQ8NAV1 312 aaKnown RBP8.61□□□□□ -1.03
BRCA1-221ENST00000493795 XAGE3Q8WTP9 111 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 MRFAP1L1Q96HT8 127 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 TMEM87BQ96K49 555 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 PLEKHA4Q9H4M7 779 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 TBC1D7Q9P0N9 293 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 EFCAB14O75071 495 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 N4BP1O75113 896 aaKnown RBP8.61□□□□□ -1.03
BRCA1-221ENST00000493795 STAT1P42224 750 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 NELFCDQ8IXH7 590 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 PIP4K2CQ8TBX8 421 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 GDAP1L1Q96MZ0 367 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 RTEL1Q9NZ71 1219 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 CHPF2Q9P2E5 772 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 POLKQ9UBT6 870 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 TNNC2P02585 160 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 SKIP12755 728 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 XPAP23025 273 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-221ENST00000493795 NEK2P51955 445 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 DEUP1Q05D60 604 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 ZBTB41Q5SVQ8 909 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 MYLK4Q86YV6 388 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-221ENST00000493795 ST13P4Q8IZP2 240 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-221ENST00000493795 PGBD1Q96JS3 809 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 DPH5Q9H2P9 285 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 DENND2AQ9ULE3 1009 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 NSD2O96028 1365 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 HEXIM1O94992 359 aaKnown RBP8.6□□□□□ -1.03
BRCA1-221ENST00000493795 PCYT1AP49585 367 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 PDE6CP51160 858 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 LRMPQ12912 555 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 CALCRLQ16602 461 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 OTUD6AQ7L8S5 288 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 DYMQ7RTS9 669 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 ANKRD44Q8N8A2 993 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 YY1AP1Q9H869 796 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 IRAK4Q9NWZ3 460 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 SAP30BPQ9UHR5 308 aaKnown RBP8.6□□□□□ -1.03
BRCA1-221ENST00000493795 CAPN11Q9UMQ6 739 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 PARP3Q9Y6F1 533 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 TOP2AP11388 1531 aaKnown RBP8.6□□□□□ -1.03
BRCA1-221ENST00000493795 ABL1P00519 1130 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 IFNA8P32881 189 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 POSTNQ15063 836 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 ZC3H12BQ5HYM0 836 aaKnown RBP8.6□□□□□ -1.03
BRCA1-221ENST00000493795 SERPINI1Q99574 410 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 LLPHQ9BRT6 129 aaKnown RBP8.6□□□□□ -1.03
BRCA1-221ENST00000493795 CBX8Q9HC52 389 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 OLA1Q9NTK5 396 aaKnown RBP8.6□□□□□ -1.03
BRCA1-221ENST00000493795 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-221ENST00000493795 COPG1Q9Y678 874 aaKnown RBP8.6□□□□□ -1.03
BRCA1-221ENST00000493795 POTEB3A0JP26 581 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 PYGBP11216 843 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 POLD1P28340 1107 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 SLC12A1Q13621 1099 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 TAF11Q15544 211 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 PPP4R4Q6NUP7 873 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 C16orf87Q6PH81 154 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 POTEBQ6S5H4 581 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 TRMT10CQ7L0Y3 403 aaKnown RBP8.6□□□□□ -1.03
BRCA1-221ENST00000493795 CABP7Q86V35 215 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms