RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 CCDC146Q8IYE0 955 aa8.99□□□□□ -0.97
TPR-208ENST00000492973 IFNL2Q8IZJ0 200 aa8.99□□□□□ -0.97
TPR-208ENST00000492973 TMPRSS13Q9BYE2 586 aa8.99□□□□□ -0.97
TPR-208ENST00000492973 RNF208Q9H0X6 261 aa8.99□□□□□ -0.97
TPR-208ENST00000492973 TMEM39AQ9NV64 488 aa8.99□□□□□ -0.97
TPR-208ENST00000492973 WNK3Q9BYP7 1800 aa8.98□□□□□ -0.97
TPR-208ENST00000492973 KCNQ2O43526 872 aa8.98□□□□□ -0.97
TPR-208ENST00000492973 GLB1P16278 677 aa8.98□□□□□ -0.97
TPR-208ENST00000492973 MAOBP27338 520 aa8.98□□□□□ -0.97
TPR-208ENST00000492973 AP3B2Q13367 1082 aa8.98□□□□□ -0.97
TPR-208ENST00000492973 POU4F3Q15319 338 aa8.98□□□□□ -0.97
TPR-208ENST00000492973 AKAP4Q5JQC9 854 aa8.98□□□□□ -0.97
TPR-208ENST00000492973 TMC4Q7Z404 712 aa8.98□□□□□ -0.97
TPR-208ENST00000492973 ACSBG1Q96GR2 724 aa8.98□□□□□ -0.97
TPR-208ENST00000492973 UBL7Q96S82 380 aaPredicted RBP8.98□□□□□ -0.97
TPR-208ENST00000492973 GPN3Q9UHW5 284 aaPredicted RBP8.98□□□□□ -0.97
TPR-208ENST00000492973 BRWD3Q6RI45 1802 aa8.97□□□□□ -0.97
TPR-208ENST00000492973 TRIM37O94972 964 aa8.97□□□□□ -0.97
TPR-208ENST00000492973 ECEL1O95672 775 aa8.97□□□□□ -0.97
TPR-208ENST00000492973 NFE2L2Q16236 605 aa8.97□□□□□ -0.97
TPR-208ENST00000492973 C1orf141Q5JVX7 400 aa8.97□□□□□ -0.97
TPR-208ENST00000492973 NKAPLQ5M9Q1 402 aa8.97□□□□□ -0.97
TPR-208ENST00000492973 MPRIPQ6WCQ1 1025 aa8.97□□□□□ -0.97
TPR-208ENST00000492973 RUNDC1Q96C34 613 aa8.97□□□□□ -0.97
TPR-208ENST00000492973 BCL2L13Q9BXK5 485 aa8.97□□□□□ -0.97
TPR-208ENST00000492973 CEP41Q9BYV8 373 aa8.97□□□□□ -0.97
TPR-208ENST00000492973 LGR6Q9HBX8 967 aa8.97□□□□□ -0.97
TPR-208ENST00000492973 PKD1L3Q7Z443 1732 aa8.97□□□□□ -0.97
TPR-208ENST00000492973 KDM6AO15550 1401 aaPredicted RBP8.97□□□□□ -0.97
TPR-208ENST00000492973 PPP2R3AQ06190 1150 aa8.96□□□□□ -0.98
TPR-208ENST00000492973 PSMD2Q13200 908 aa8.96□□□□□ -0.98
TPR-208ENST00000492973 RSPO4Q2I0M5 234 aaPredicted RBP8.96□□□□□ -0.98
TPR-208ENST00000492973 ANKRD34AQ69YU3 496 aa8.96□□□□□ -0.98
TPR-208ENST00000492973 IL17REQ8NFR9 667 aa8.96□□□□□ -0.98
TPR-208ENST00000492973 FAM46AQ96IP4 442 aaKnown RBP8.96□□□□□ -0.98
TPR-208ENST00000492973 FAM161BQ96MY7 647 aa8.96□□□□□ -0.98
TPR-208ENST00000492973 NECAB3Q96P71 396 aaPredicted RBP8.96□□□□□ -0.98
TPR-208ENST00000492973 PNNQ9H307 717 aaKnown RBP8.96□□□□□ -0.98
TPR-208ENST00000492973 SUGCTQ9HAC7 445 aa8.96□□□□□ -0.98
TPR-208ENST00000492973 MAPK8IP3Q9UPT6 1336 aa8.96□□□□□ -0.98
TPR-208ENST00000492973 MAP3K5Q99683 1374 aa8.96□□□□□ -0.98
TPR-208ENST00000492973 SHANK3Q9BYB0 1731 aa8.95□□□□□ -0.98
TPR-208ENST00000492973 GNAT3A8MTJ3 354 aa8.95□□□□□ -0.98
TPR-208ENST00000492973 ENC1O14682 589 aa8.95□□□□□ -0.98
TPR-208ENST00000492973 RNMTO43148 476 aaKnown RBP8.95□□□□□ -0.98
TPR-208ENST00000492973 HSP90AB1P08238 724 aaKnown RBP8.95□□□□□ -0.98
TPR-208ENST00000492973 TMPOP42166 694 aaKnown RBP8.95□□□□□ -0.98
TPR-208ENST00000492973 HNRNPUQ00839 825 aaKnown RBP eCLIP8.95□□□□□ -0.98
TPR-208ENST00000492973 EXOSC6Q5RKV6 272 aaKnown RBP8.95□□□□□ -0.98
TPR-208ENST00000492973 TPTE2Q6XPS3 522 aa8.95□□□□□ -0.98
TPR-208ENST00000492973 SMG8Q8ND04 991 aaKnown RBP8.95□□□□□ -0.98
TPR-208ENST00000492973 GIPC2Q8TF65 315 aa8.95□□□□□ -0.98
TPR-208ENST00000492973 PIGBQ92521 554 aa8.95□□□□□ -0.98
TPR-208ENST00000492973 TP53INP1Q96A56 240 aa8.95□□□□□ -0.98
TPR-208ENST00000492973 CORO1BQ9BR76 489 aa8.95□□□□□ -0.98
TPR-208ENST00000492973 CEP44Q9C0F1 390 aa8.95□□□□□ -0.98
TPR-208ENST00000492973 RRP7AQ9Y3A4 280 aaKnown RBP8.95□□□□□ -0.98
TPR-208ENST00000492973 ERVV-2B6SEH9 535 aa8.94□□□□□ -0.98
TPR-208ENST00000492973 APAF1O14727 1248 aa8.94□□□□□ -0.98
TPR-208ENST00000492973 FBXO24O75426 580 aa8.94□□□□□ -0.98
TPR-208ENST00000492973 TIAF1O95411 115 aa8.94□□□□□ -0.98
TPR-208ENST00000492973 FURINP09958 794 aa8.94□□□□□ -0.98
TPR-208ENST00000492973 DCTN1Q14203 1278 aa8.94□□□□□ -0.98
TPR-208ENST00000492973 PDZD3Q86UT5 571 aa8.94□□□□□ -0.98
TPR-208ENST00000492973 STK35Q8TDR2 534 aa8.94□□□□□ -0.98
TPR-208ENST00000492973 HTATSF1O43719 755 aaKnown RBP8.93□□□□□ -0.98
TPR-208ENST00000492973 NEFMP07197 916 aa8.93□□□□□ -0.98
TPR-208ENST00000492973 CTSHP09668 335 aa8.93□□□□□ -0.98
TPR-208ENST00000492973 H2AFB1P0C5Y9 115 aa8.93□□□□□ -0.98
TPR-208ENST00000492973 H2AFB2P0C5Z0 115 aa8.93□□□□□ -0.98
TPR-208ENST00000492973 PREPP48147 710 aa8.93□□□□□ -0.98
TPR-208ENST00000492973 RIPK4P57078 832 aa8.93□□□□□ -0.98
TPR-208ENST00000492973 UVSSAQ2YD98 709 aa8.93□□□□□ -0.98
TPR-208ENST00000492973 HP1BP3Q5SSJ5 553 aaPredicted RBP8.93□□□□□ -0.98
TPR-208ENST00000492973 MCM10Q7L590 875 aa8.93□□□□□ -0.98
TPR-208ENST00000492973 DEFB132Q7Z7B7 95 aa8.93□□□□□ -0.98
TPR-208ENST00000492973 SULF2Q8IWU5 870 aa8.93□□□□□ -0.98
TPR-208ENST00000492973 ARMC10Q8N2F6 343 aa8.93□□□□□ -0.98
TPR-208ENST00000492973 SYTL4Q96C24 671 aaPredicted RBP8.93□□□□□ -0.98
TPR-208ENST00000492973 THUMPD2Q9BTF0 503 aaKnown RBP8.93□□□□□ -0.98
TPR-208ENST00000492973 CEMIPQ8WUJ3 1361 aa8.93□□□□□ -0.98
TPR-208ENST00000492973 PAGE1O75459 146 aa8.92□□□□□ -0.98
TPR-208ENST00000492973 GSTP1P09211 210 aaKnown RBP8.92□□□□□ -0.98
TPR-208ENST00000492973 NME2P22392 152 aa8.92□□□□□ -0.98
TPR-208ENST00000492973 FDX2Q6P4F2 183 aa8.92□□□□□ -0.98
TPR-208ENST00000492973 SLC52A2Q9HAB3 445 aa8.92□□□□□ -0.98
TPR-208ENST00000492973 CYP4F12Q9HCS2 524 aa8.92□□□□□ -0.98
TPR-208ENST00000492973 TMOD3Q9NYL9 352 aa8.92□□□□□ -0.98
TPR-208ENST00000492973 TTF2Q9UNY4 1162 aaKnown RBP8.92□□□□□ -0.98
TPR-208ENST00000492973 SORBS3O60504 671 aa8.91□□□□□ -0.98
TPR-208ENST00000492973 ARNTP27540 789 aa8.91□□□□□ -0.98
TPR-208ENST00000492973 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.91□□□□□ -0.98
TPR-208ENST00000492973 RTF1Q92541 710 aaKnown RBP8.91□□□□□ -0.98
TPR-208ENST00000492973 CAMKK2Q96RR4 588 aa8.91□□□□□ -0.98
TPR-208ENST00000492973 CCDC86Q9H6F5 360 aaKnown RBP8.91□□□□□ -0.98
TPR-208ENST00000492973 KRT82Q9NSB4 513 aa8.91□□□□□ -0.98
TPR-208ENST00000492973 ATG3Q9NT62 314 aa8.91□□□□□ -0.98
TPR-208ENST00000492973 ASAP1Q9ULH1 1129 aa8.91□□□□□ -0.98
TPR-208ENST00000492973 MRC1P22897 1456 aa8.9□□□□□ -0.98
TPR-208ENST00000492973 ZBED9Q6R2W3 1325 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms