RNA–Protein interactions for RNA: ENST00000491429.1

SCN1A-206, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 4

Gene SCN1A, Length 542 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-206ENST00000491429 WAPLQ7Z5K2 1190 aa8□□□□□ -1.13
SCN1A-206ENST00000491429 TMEM151BQ8IW70 566 aa8□□□□□ -1.13
SCN1A-206ENST00000491429 SIGLEC10Q96LC7 697 aa8□□□□□ -1.13
SCN1A-206ENST00000491429 HDAC8Q9BY41 377 aa8□□□□□ -1.13
SCN1A-206ENST00000491429 XYLT2Q9H1B5 865 aa8□□□□□ -1.13
SCN1A-206ENST00000491429 PARP2Q9UGN5 583 aa8□□□□□ -1.13
SCN1A-206ENST00000491429 ZMYM5Q9UJ78 669 aa8□□□□□ -1.13
SCN1A-206ENST00000491429 IRAK3Q9Y616 596 aa8□□□□□ -1.13
SCN1A-206ENST00000491429 RNF111Q6ZNA4 994 aa7.99□□□□□ -1.13
SCN1A-206ENST00000491429 SYTL5Q8TDW5 730 aaPredicted RBP7.99□□□□□ -1.13
SCN1A-206ENST00000491429 MAP6Q96JE9 813 aa7.99□□□□□ -1.13
SCN1A-206ENST00000491429 FOXP3Q9BZS1 431 aa7.99□□□□□ -1.13
SCN1A-206ENST00000491429 RTEL1Q9NZ71 1219 aa7.99□□□□□ -1.13
SCN1A-206ENST00000491429 TMEM82A0PJX8 343 aa7.98□□□□□ -1.13
SCN1A-206ENST00000491429 ANKRD33BA6NCL7 494 aa7.98□□□□□ -1.13
SCN1A-206ENST00000491429 NRDCO43847 1150 aa7.98□□□□□ -1.13
SCN1A-206ENST00000491429 SYN1P17600 705 aa7.98□□□□□ -1.13
SCN1A-206ENST00000491429 DAB2P98082 770 aa7.98□□□□□ -1.13
SCN1A-206ENST00000491429 CEP128Q6ZU80 1094 aa7.98□□□□□ -1.13
SCN1A-206ENST00000491429 DACT3Q96B18 629 aaPredicted RBP7.98□□□□□ -1.13
SCN1A-206ENST00000491429 RHOVQ96L33 236 aa7.98□□□□□ -1.13
SCN1A-206ENST00000491429 CNTD2Q9H8S5 307 aa7.98□□□□□ -1.13
SCN1A-206ENST00000491429 EPB41L4AQ9HCS5 686 aaPredicted RBP7.98□□□□□ -1.13
SCN1A-206ENST00000491429 SIRT5Q9NXA8 310 aa7.98□□□□□ -1.13
SCN1A-206ENST00000491429 OTOL1A6NHN0 477 aaPredicted RBP7.97□□□□□ -1.13
SCN1A-206ENST00000491429 VIPR1P32241 457 aa7.97□□□□□ -1.13
SCN1A-206ENST00000491429 GBP1P32455 592 aa7.97□□□□□ -1.13
SCN1A-206ENST00000491429 AFF3P51826 1226 aaKnown RBP7.97□□□□□ -1.13
SCN1A-206ENST00000491429 PSMD2Q13200 908 aa7.97□□□□□ -1.13
SCN1A-206ENST00000491429 SLC14A2Q15849 920 aa7.97□□□□□ -1.13
SCN1A-206ENST00000491429 ZPBP2Q6X784 338 aa7.97□□□□□ -1.13
SCN1A-206ENST00000491429 ENOX1Q8TC92 643 aaKnown RBP7.97□□□□□ -1.13
SCN1A-206ENST00000491429 HHIPL1Q96JK4 782 aa7.97□□□□□ -1.13
SCN1A-206ENST00000491429 FAM161BQ96MY7 647 aa7.97□□□□□ -1.13
SCN1A-206ENST00000491429 ASCC2Q9H1I8 757 aaPredicted RBP7.97□□□□□ -1.13
SCN1A-206ENST00000491429 USP31Q70CQ4 1352 aa7.97□□□□□ -1.13
SCN1A-206ENST00000491429 HRKO00198 91 aa7.96□□□□□ -1.14
SCN1A-206ENST00000491429 KIR2DL1P43626 348 aaPredicted RBP7.96□□□□□ -1.14
SCN1A-206ENST00000491429 KIR2DL2P43627 348 aaPredicted RBP7.96□□□□□ -1.14
SCN1A-206ENST00000491429 KRTAP10-2P60368 255 aa7.96□□□□□ -1.14
SCN1A-206ENST00000491429 FAM160A1Q05DH4 1040 aa7.96□□□□□ -1.14
SCN1A-206ENST00000491429 VMACQ2NL98 169 aa7.96□□□□□ -1.14
SCN1A-206ENST00000491429 TMC3Q7Z5M5 1100 aa7.96□□□□□ -1.14
SCN1A-206ENST00000491429 FBXO27Q8NI29 283 aa7.96□□□□□ -1.14
SCN1A-206ENST00000491429 TCTN2Q96GX1 697 aa7.96□□□□□ -1.14
SCN1A-206ENST00000491429 PLCD4Q9BRC7 762 aa7.96□□□□□ -1.14
SCN1A-206ENST00000491429 CRTAC1Q9NQ79 661 aa7.96□□□□□ -1.14
SCN1A-206ENST00000491429 TCFL5Q9UL49 500 aa7.96□□□□□ -1.14
SCN1A-206ENST00000491429 N4BP3O15049 544 aa7.95□□□□□ -1.14
SCN1A-206ENST00000491429 FKTNO75072 461 aa7.95□□□□□ -1.14
SCN1A-206ENST00000491429 UBOX5O94941 541 aa7.95□□□□□ -1.14
SCN1A-206ENST00000491429 DAGLBQ8NCG7 672 aa7.95□□□□□ -1.14
SCN1A-206ENST00000491429 FEZF2Q8TBJ5 459 aa7.95□□□□□ -1.14
SCN1A-206ENST00000491429 TMEM74Q96NL1 305 aa7.95□□□□□ -1.14
SCN1A-206ENST00000491429 SLC22A31A6NKX4 558 aa7.94□□□□□ -1.14
SCN1A-206ENST00000491429 RGS13O14921 159 aa7.94□□□□□ -1.14
SCN1A-206ENST00000491429 SASH1O94885 1247 aa7.94□□□□□ -1.14
SCN1A-206ENST00000491429 GBP2P32456 591 aaPredicted RBP7.94□□□□□ -1.14
SCN1A-206ENST00000491429 CDR1P51861 262 aa7.94□□□□□ -1.14
SCN1A-206ENST00000491429 CHMP4BP1P59074 171 aa7.94□□□□□ -1.14
SCN1A-206ENST00000491429 SNW1Q13573 536 aaKnown RBP7.94□□□□□ -1.14
SCN1A-206ENST00000491429 KIR3DS1Q14943 382 aa7.94□□□□□ -1.14
SCN1A-206ENST00000491429 SKOR2Q2VWA4 1001 aaPredicted RBP7.94□□□□□ -1.14
SCN1A-206ENST00000491429 BBS9Q3SYG4 887 aa7.94□□□□□ -1.14
SCN1A-206ENST00000491429 REC114Q7Z4M0 266 aa7.94□□□□□ -1.14
SCN1A-206ENST00000491429 CXorf38Q8TB03 319 aa7.94□□□□□ -1.14
SCN1A-206ENST00000491429 IRS4O14654 1257 aaPredicted RBP7.93□□□□□ -1.14
SCN1A-206ENST00000491429 PNLIPP16233 465 aa7.93□□□□□ -1.14
SCN1A-206ENST00000491429 PCBP3P57721 371 aaKnown RBP7.93□□□□□ -1.14
SCN1A-206ENST00000491429 YBX1P67809 324 aaKnown RBP7.93□□□□□ -1.14
SCN1A-206ENST00000491429 SNAP47Q5SQN1 464 aa7.93□□□□□ -1.14
SCN1A-206ENST00000491429 TMEFF1Q8IYR6 380 aa7.93□□□□□ -1.14
SCN1A-206ENST00000491429 ZNF655Q8N720 491 aaPredicted RBP7.93□□□□□ -1.14
SCN1A-206ENST00000491429 GOLM1Q8NBJ4 401 aa7.93□□□□□ -1.14
SCN1A-206ENST00000491429 SSU72P8A0A1W2PR75 194 aa7.92□□□□□ -1.14
SCN1A-206ENST00000491429 SYPP08247 313 aa7.92□□□□□ -1.14
SCN1A-206ENST00000491429 RTP1P59025 263 aa7.92□□□□□ -1.14
SCN1A-206ENST00000491429 RNF4P78317 190 aa7.92□□□□□ -1.14
SCN1A-206ENST00000491429 MPP2Q14168 576 aa7.92□□□□□ -1.14
SCN1A-206ENST00000491429 NBPF9Q3BBW0 867 aa7.92□□□□□ -1.14
SCN1A-206ENST00000491429 ARSHQ5FYA8 562 aa7.92□□□□□ -1.14
SCN1A-206ENST00000491429 ZDHHC14Q8IZN3 488 aa7.92□□□□□ -1.14
SCN1A-206ENST00000491429 SYT8Q8NBV8 401 aa7.92□□□□□ -1.14
SCN1A-206ENST00000491429 LINC00116Q8NCU8 138 aa7.92□□□□□ -1.14
SCN1A-206ENST00000491429 MINPP1Q9UNW1 487 aa7.92□□□□□ -1.14
SCN1A-206ENST00000491429 MINDY4BA8MYZ0 360 aa7.91□□□□□ -1.14
SCN1A-206ENST00000491429 PRAMEF1O95521 474 aa7.91□□□□□ -1.14
SCN1A-206ENST00000491429 ERVFRD-1P60508 538 aa7.91□□□□□ -1.14
SCN1A-206ENST00000491429 NBPF12Q5TAG4 269 aaPredicted RBP7.91□□□□□ -1.14
SCN1A-206ENST00000491429 TMC4Q7Z404 712 aa7.91□□□□□ -1.14
SCN1A-206ENST00000491429 RELL1Q8IUW5 271 aa7.91□□□□□ -1.14
SCN1A-206ENST00000491429 MZB1Q8WU39 189 aa7.91□□□□□ -1.14
SCN1A-206ENST00000491429 TLR3O15455 904 aaKnown RBP7.9□□□□□ -1.14
SCN1A-206ENST00000491429 GARTP22102 1010 aa7.9□□□□□ -1.14
SCN1A-206ENST00000491429 POLR2BP30876 1174 aaKnown RBP7.9□□□□□ -1.14
SCN1A-206ENST00000491429 XPCQ01831 940 aaPredicted RBP7.9□□□□□ -1.14
SCN1A-206ENST00000491429 ERICH6Q7L0X2 663 aa7.9□□□□□ -1.14
SCN1A-206ENST00000491429 PRRT2Q7Z6L0 340 aaPredicted RBP7.9□□□□□ -1.14
SCN1A-206ENST00000491429 CRELD1Q96HD1 420 aa7.9□□□□□ -1.14
SCN1A-206ENST00000491429 RSRP1Q9BUV0 290 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms