RNA–Protein interactions for RNA: ENST00000491349.5

RNF38-209, Transcript of ring finger protein 38, humanhuman

TSL 5

Gene RNF38, Length 959 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-209ENST00000491349 USP17L15C9J2P7 530 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 USP17L13C9JLJ4 530 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 USP17L11C9JVI0 530 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 USP17L18D6R9N7 530 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 USP17L22D6RA61 530 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 USP17L17D6RBQ6 530 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 USP17L19D6RCP7 530 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 USP17L20D6RJB6 530 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 SLURP2P0DP57 97 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 SLC1A4P43007 532 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 USP17L24Q0WX57 530 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 CCDC96Q2M329 555 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 SH3D19Q5HYK7 790 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 RCSD1Q6JBY9 416 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 RUFY3Q7L099 469 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 ANKRD23Q86SG2 305 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 CCAR1Q8IX12 1150 aaKnown RBP9.7□□□□□ -0.86
RNF38-209ENST00000491349 GMCL1P1Q8NEA9 526 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 SMCR8Q8TEV9 937 aaPredicted RBP9.7□□□□□ -0.86
RNF38-209ENST00000491349 CHURC1Q8WUH1 139 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 DCAF4Q8WV16 495 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 MKL1Q969V6 931 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 MS4A4AQ96JQ5 239 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 PARK7Q99497 189 aaKnown RBP9.7□□□□□ -0.86
RNF38-209ENST00000491349 ZKSCAN3Q9BRR0 538 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 BACH2Q9BYV9 841 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 TANGO6Q9C0B7 1094 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 NBPF3Q9H094 633 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 VCPKMTQ9H867 229 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 ZFYVE28Q9HCC9 887 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 INCENPQ9NQS7 918 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 AGTPBP1Q9UPW5 1226 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 SLC45A1Q9Y2W3 748 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 SLC12A7Q9Y666 1083 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 PTPRFP10586 1907 aa9.7□□□□□ -0.86
RNF38-209ENST00000491349 IGKV6D-41A0A0C4DH26 115 aa9.69□□□□□ -0.86
RNF38-209ENST00000491349 CCDC196A0A1B0GTZ2 297 aa9.69□□□□□ -0.86
RNF38-209ENST00000491349 FAM155AB1AL88 458 aaPredicted RBP9.69□□□□□ -0.86
RNF38-209ENST00000491349 F5H6K3 240 aa9.69□□□□□ -0.86
RNF38-209ENST00000491349 FDX1P10109 184 aa9.69□□□□□ -0.86
RNF38-209ENST00000491349 HOXB3P14651 431 aaPredicted RBP9.69□□□□□ -0.86
RNF38-209ENST00000491349 RPS6KB1P23443 525 aa9.69□□□□□ -0.86
RNF38-209ENST00000491349 LIFRP42702 1097 aa9.69□□□□□ -0.86
RNF38-209ENST00000491349 TM4SF4P48230 202 aa9.69□□□□□ -0.86
RNF38-209ENST00000491349 GNAQP50148 359 aa9.69□□□□□ -0.86
RNF38-209ENST00000491349 KLRC3Q07444 240 aa9.69□□□□□ -0.86
RNF38-209ENST00000491349 RRP1BQ14684 758 aaKnown RBP9.69□□□□□ -0.86
RNF38-209ENST00000491349 ARHGEF6Q15052 776 aa9.69□□□□□ -0.86
RNF38-209ENST00000491349 GPATCH4Q5T3I0 446 aaKnown RBP9.69□□□□□ -0.86
RNF38-209ENST00000491349 SLFN13Q68D06 897 aa9.69□□□□□ -0.86
RNF38-209ENST00000491349 FAM160B2Q86V87 743 aa9.69□□□□□ -0.86
RNF38-209ENST00000491349 MB21D2Q8IYB1 491 aaPredicted RBP9.69□□□□□ -0.86
RNF38-209ENST00000491349 LRRC47Q8N1G4 583 aaKnown RBP9.69□□□□□ -0.86
RNF38-209ENST00000491349 PNMA1Q8ND90 353 aa9.69□□□□□ -0.86
RNF38-209ENST00000491349 CTCFLQ8NI51 663 aaPredicted RBP9.69□□□□□ -0.86
RNF38-209ENST00000491349 KCNB2Q92953 911 aa9.69□□□□□ -0.86
RNF38-209ENST00000491349 C12orf42Q96LP6 360 aa9.69□□□□□ -0.86
RNF38-209ENST00000491349 CWC22Q9HCG8 908 aaKnown RBP9.69□□□□□ -0.86
RNF38-209ENST00000491349 PDRG1Q9NUG6 133 aa9.69□□□□□ -0.86
RNF38-209ENST00000491349 HOXC10Q9NYD6 342 aa9.69□□□□□ -0.86
RNF38-209ENST00000491349 PNMA2Q9UL42 364 aa9.69□□□□□ -0.86
RNF38-209ENST00000491349 MTMR7Q9Y216 660 aa9.69□□□□□ -0.86
RNF38-209ENST00000491349 LOC285556D6RIA3 1793 aa9.68□□□□□ -0.86
RNF38-209ENST00000491349 TESPA1A2RU30 521 aaPredicted RBP9.68□□□□□ -0.86
RNF38-209ENST00000491349 SMIM22K7EJ46 135 aa9.68□□□□□ -0.86
RNF38-209ENST00000491349 PDHXO00330 501 aa9.68□□□□□ -0.86
RNF38-209ENST00000491349 DHX16O60231 1041 aaKnown RBP9.68□□□□□ -0.86
RNF38-209ENST00000491349 AOC2O75106 756 aa9.68□□□□□ -0.86
RNF38-209ENST00000491349 DDAH1O94760 285 aa9.68□□□□□ -0.86
RNF38-209ENST00000491349 PARP1P09874 1014 aaKnown RBP9.68□□□□□ -0.86
RNF38-209ENST00000491349 BMP3P12645 472 aa9.68□□□□□ -0.86
RNF38-209ENST00000491349 GUCY1A2P33402 732 aa9.68□□□□□ -0.86
RNF38-209ENST00000491349 STAT2P52630 851 aa9.68□□□□□ -0.86
RNF38-209ENST00000491349 HTRA3P83110 453 aa9.68□□□□□ -0.86
RNF38-209ENST00000491349 TRAF1Q13077 416 aa9.68□□□□□ -0.86
RNF38-209ENST00000491349 KIF22Q14807 665 aa9.68□□□□□ -0.86
RNF38-209ENST00000491349 PPP2R5BQ15173 497 aa9.68□□□□□ -0.86
RNF38-209ENST00000491349 RABEP1Q15276 862 aa9.68□□□□□ -0.86
RNF38-209ENST00000491349 TAF1CQ15572 869 aaPredicted RBP9.68□□□□□ -0.86
RNF38-209ENST00000491349 ASPRV1Q53RT3 343 aa9.68□□□□□ -0.86
RNF38-209ENST00000491349 CPLX2Q6PUV4 134 aaKnown RBP9.68□□□□□ -0.86
RNF38-209ENST00000491349 CYB5R4Q7L1T6 521 aa9.68□□□□□ -0.86
RNF38-209ENST00000491349 CHST3Q7LGC8 479 aa9.68□□□□□ -0.86
RNF38-209ENST00000491349 CCDC84Q86UT8 332 aaPredicted RBP9.68□□□□□ -0.86
RNF38-209ENST00000491349 ENAHQ8N8S7 591 aaPredicted RBP9.68□□□□□ -0.86
RNF38-209ENST00000491349 ACER1Q8TDN7 264 aa9.68□□□□□ -0.86
RNF38-209ENST00000491349 ANKS1AQ92625 1134 aa9.68□□□□□ -0.86
RNF38-209ENST00000491349 GMCL1Q96IK5 515 aa9.68□□□□□ -0.86
RNF38-209ENST00000491349 TMEM47Q9BQJ4 181 aa9.68□□□□□ -0.86
RNF38-209ENST00000491349 RPAP3Q9H6T3 665 aaPredicted RBP9.68□□□□□ -0.86
RNF38-209ENST00000491349 ZSWIM6Q9HCJ5 1215 aa9.68□□□□□ -0.86
RNF38-209ENST00000491349 IL17RBQ9NRM6 502 aa9.68□□□□□ -0.86
RNF38-209ENST00000491349 FEM1BQ9UK73 627 aa9.68□□□□□ -0.86
RNF38-209ENST00000491349 MYPNQ86TC9 1320 aa9.67□□□□□ -0.86
RNF38-209ENST00000491349 NMT2O60551 498 aa9.67□□□□□ -0.86
RNF38-209ENST00000491349 ZBED4O75132 1171 aa9.67□□□□□ -0.86
RNF38-209ENST00000491349 FLOT1O75955 427 aa9.67□□□□□ -0.86
RNF38-209ENST00000491349 VCAM1P19320 739 aa9.67□□□□□ -0.86
RNF38-209ENST00000491349 HOXA7P31268 230 aaPredicted RBP9.67□□□□□ -0.86
RNF38-209ENST00000491349 GJA5P36382 358 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms