RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 A0A087X0B3 334 aa21.79■■□□□ 1.08
SNAPC3-206ENST00000490969 N4BP3O15049 544 aa21.79■■□□□ 1.08
SNAPC3-206ENST00000490969 ONECUT3O60422 494 aaPredicted RBP21.79■■□□□ 1.08
SNAPC3-206ENST00000490969 KRT31Q15323 416 aa21.79■■□□□ 1.08
SNAPC3-206ENST00000490969 TTLL11Q8NHH1 800 aa21.79■■□□□ 1.08
SNAPC3-206ENST00000490969 PAGE5Q96GU1 130 aa21.79■■□□□ 1.08
SNAPC3-206ENST00000490969 MMS19Q96T76 1030 aa21.79■■□□□ 1.08
SNAPC3-206ENST00000490969 MYCBPQ99417 103 aaPredicted RBP21.79■■□□□ 1.08
SNAPC3-206ENST00000490969 HDAC6Q9UBN7 1215 aa21.79■■□□□ 1.08
SNAPC3-206ENST00000490969 TRIM10Q9UDY6 481 aa21.79■■□□□ 1.08
SNAPC3-206ENST00000490969 TRPC5Q9UL62 973 aaPredicted RBP21.79■■□□□ 1.08
SNAPC3-206ENST00000490969 PSMD14O00487 310 aa21.78■■□□□ 1.08
SNAPC3-206ENST00000490969 IRS4O14654 1257 aaPredicted RBP21.78■■□□□ 1.08
SNAPC3-206ENST00000490969 CSF1RP07333 972 aa21.78■■□□□ 1.08
SNAPC3-206ENST00000490969 GGCXP38435 758 aa21.78■■□□□ 1.08
SNAPC3-206ENST00000490969 SH3RF1Q7Z6J0 888 aa21.78■■□□□ 1.08
SNAPC3-206ENST00000490969 TARSL2A2RTX5 802 aaKnown RBP21.78■■□□□ 1.08
SNAPC3-206ENST00000490969 ENC1O14682 589 aa21.78■■□□□ 1.08
SNAPC3-206ENST00000490969 ADD2P35612 726 aa21.78■■□□□ 1.08
SNAPC3-206ENST00000490969 LIFRP42702 1097 aa21.78■■□□□ 1.08
SNAPC3-206ENST00000490969 GSDMAQ96QA5 445 aa21.78■■□□□ 1.08
SNAPC3-206ENST00000490969 LIMA1Q9UHB6 759 aaKnown RBP21.78■■□□□ 1.08
SNAPC3-206ENST00000490969 REXO2Q9Y3B8 237 aaKnown RBP21.78■■□□□ 1.08
SNAPC3-206ENST00000490969 TRIM14Q14142 442 aa21.77■■□□□ 1.08
SNAPC3-206ENST00000490969 SART3Q15020 963 aaKnown RBP21.77■■□□□ 1.08
SNAPC3-206ENST00000490969 GDAP1L1Q96MZ0 367 aa21.77■■□□□ 1.08
SNAPC3-206ENST00000490969 PLA2G12BQ9BX93 195 aa21.77■■□□□ 1.08
SNAPC3-206ENST00000490969 AATFQ9NY61 560 aaKnown RBP eCLIP21.77■■□□□ 1.08
SNAPC3-206ENST00000490969 CTNND2Q9UQB3 1225 aa21.77■■□□□ 1.08
SNAPC3-206ENST00000490969 KRT9P35527 623 aa21.77■■□□□ 1.08
SNAPC3-206ENST00000490969 DPYDQ12882 1025 aa21.77■■□□□ 1.08
SNAPC3-206ENST00000490969 CCDC57Q2TAC2 916 aa21.77■■□□□ 1.08
SNAPC3-206ENST00000490969 MCTP2Q6DN12 878 aa21.77■■□□□ 1.08
SNAPC3-206ENST00000490969 TRIM22Q8IYM9 498 aa21.77■■□□□ 1.08
SNAPC3-206ENST00000490969 FAM76AQ8TAV0 307 aa21.77■■□□□ 1.08
SNAPC3-206ENST00000490969 EPSTI1Q96J88 318 aa21.77■■□□□ 1.08
SNAPC3-206ENST00000490969 CRACR2AQ9BSW2 395 aa21.77■■□□□ 1.08
SNAPC3-206ENST00000490969 INCENPQ9NQS7 918 aa21.77■■□□□ 1.08
SNAPC3-206ENST00000490969 EPN1Q9Y6I3 576 aaPredicted RBP21.77■■□□□ 1.08
SNAPC3-206ENST00000490969 IFIT3O14879 490 aaKnown RBP21.76■■□□□ 1.07
SNAPC3-206ENST00000490969 NDUFA10O95299 355 aa21.76■■□□□ 1.07
SNAPC3-206ENST00000490969 CHP1Q99653 195 aa21.76■■□□□ 1.07
SNAPC3-206ENST00000490969 VPS16Q9H269 839 aa21.76■■□□□ 1.07
SNAPC3-206ENST00000490969 SAR1BQ9Y6B6 198 aa21.76■■□□□ 1.07
SNAPC3-206ENST00000490969 SBF2Q86WG5 1849 aa21.76■■□□□ 1.07
SNAPC3-206ENST00000490969 LOC102724159A0A0B4J2E5 919 aa21.76■■□□□ 1.07
SNAPC3-206ENST00000490969 LRRC10BA6NIK2 292 aa21.76■■□□□ 1.07
SNAPC3-206ENST00000490969 PWP2Q15269 919 aaKnown RBP21.76■■□□□ 1.07
SNAPC3-206ENST00000490969 SWT1Q5T5J6 900 aaKnown RBP21.76■■□□□ 1.07
SNAPC3-206ENST00000490969 KAT14Q9H8E8 782 aa21.76■■□□□ 1.07
SNAPC3-206ENST00000490969 AGPSO00116 658 aa21.75■■□□□ 1.07
SNAPC3-206ENST00000490969 COBLO75128 1261 aa21.75■■□□□ 1.07
SNAPC3-206ENST00000490969 ERLIN2O94905 339 aa21.75■■□□□ 1.07
SNAPC3-206ENST00000490969 ATP1A1P05023 1023 aaKnown RBP21.75■■□□□ 1.07
SNAPC3-206ENST00000490969 CCT5P48643 541 aa21.75■■□□□ 1.07
SNAPC3-206ENST00000490969 E2F4Q16254 413 aa21.75■■□□□ 1.07
SNAPC3-206ENST00000490969 OXER1Q8TDS5 423 aa21.75■■□□□ 1.07
SNAPC3-206ENST00000490969 HAUS4Q9H6D7 363 aa21.75■■□□□ 1.07
SNAPC3-206ENST00000490969 CABP5Q9NP86 173 aa21.75■■□□□ 1.07
SNAPC3-206ENST00000490969 CICQ96RK0 1608 aaPredicted RBP21.75■■□□□ 1.07
SNAPC3-206ENST00000490969 MCAMP43121 646 aa21.75■■□□□ 1.07
SNAPC3-206ENST00000490969 COPB1P53618 953 aaKnown RBP21.75■■□□□ 1.07
SNAPC3-206ENST00000490969 CTSWP56202 376 aa21.75■■□□□ 1.07
SNAPC3-206ENST00000490969 RPGRIP1Q96KN7 1286 aa21.75■■□□□ 1.07
SNAPC3-206ENST00000490969 SELENOOQ9BVL4 669 aa21.75■■□□□ 1.07
SNAPC3-206ENST00000490969 SRGAP2O75044 1071 aa21.74■■□□□ 1.07
SNAPC3-206ENST00000490969 ZMYND10O75800 440 aa21.74■■□□□ 1.07
SNAPC3-206ENST00000490969 ITGA6P23229 1130 aa21.74■■□□□ 1.07
SNAPC3-206ENST00000490969 IRAK1P51617 712 aa21.74■■□□□ 1.07
SNAPC3-206ENST00000490969 TAB2Q9NYJ8 693 aa21.74■■□□□ 1.07
SNAPC3-206ENST00000490969 ZSWIM5Q9P217 1185 aa21.74■■□□□ 1.07
SNAPC3-206ENST00000490969 NIP7Q9Y221 180 aaKnown RBP eCLIP21.74■■□□□ 1.07
SNAPC3-206ENST00000490969 NHSQ6T4R5 1651 aa21.74■■□□□ 1.07
SNAPC3-206ENST00000490969 PAPD7Q5XG87 772 aaKnown RBP21.74■■□□□ 1.07
SNAPC3-206ENST00000490969 GSPT2Q8IYD1 628 aaKnown RBP21.74■■□□□ 1.07
SNAPC3-206ENST00000490969 KAT2BQ92831 832 aa21.74■■□□□ 1.07
SNAPC3-206ENST00000490969 SRP68Q9UHB9 627 aaKnown RBP21.74■■□□□ 1.07
SNAPC3-206ENST00000490969 FBXO3Q9UK99 471 aa21.74■■□□□ 1.07
SNAPC3-206ENST00000490969 GOLGA6CA6NDK9 693 aa21.73■■□□□ 1.07
SNAPC3-206ENST00000490969 EBAG9O00559 213 aa21.73■■□□□ 1.07
SNAPC3-206ENST00000490969 GOLGA6DP0CG33 693 aa21.73■■□□□ 1.07
SNAPC3-206ENST00000490969 MYBL2P10244 700 aa21.73■■□□□ 1.07
SNAPC3-206ENST00000490969 LIG3P49916 1009 aa21.73■■□□□ 1.07
SNAPC3-206ENST00000490969 CKAP4Q07065 602 aaKnown RBP21.73■■□□□ 1.07
SNAPC3-206ENST00000490969 SPAG1Q07617 926 aa21.73■■□□□ 1.07
SNAPC3-206ENST00000490969 CCDC82Q8N4S0 544 aa21.73■■□□□ 1.07
SNAPC3-206ENST00000490969 SYMPKQ92797 1274 aaKnown RBP21.73■■□□□ 1.07
SNAPC3-206ENST00000490969 CAPZA3Q96KX2 299 aa21.73■■□□□ 1.07
SNAPC3-206ENST00000490969 GOLGA6AQ9NYA3 693 aa21.73■■□□□ 1.07
SNAPC3-206ENST00000490969 FAM169AQ9Y6X4 670 aa21.73■■□□□ 1.07
SNAPC3-206ENST00000490969 NID2Q14112 1375 aa21.73■■□□□ 1.07
SNAPC3-206ENST00000490969 DEXIO95424 95 aa21.73■■□□□ 1.07
SNAPC3-206ENST00000490969 IFIT5Q13325 482 aaKnown RBP21.73■■□□□ 1.07
SNAPC3-206ENST00000490969 RTN1Q16799 776 aa21.73■■□□□ 1.07
SNAPC3-206ENST00000490969 CEP89Q96ST8 783 aa21.73■■□□□ 1.07
SNAPC3-206ENST00000490969 CCNL1Q9UK58 526 aaPredicted RBP21.73■■□□□ 1.07
SNAPC3-206ENST00000490969 CCNI2Q6ZMN8 369 aaPredicted RBP21.72■■□□□ 1.07
SNAPC3-206ENST00000490969 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.72■■□□□ 1.07
SNAPC3-206ENST00000490969 MYH3P11055 1940 aa21.72■■□□□ 1.07
SNAPC3-206ENST00000490969 TRIM75PA6NK02 468 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms