RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 SLAIN1Q8ND83 568 aa20.07■□□□□ 0.8
RAPGEF3-212ENST00000490387 ANKS1AQ92625 1134 aa20.07■□□□□ 0.8
RAPGEF3-212ENST00000490387 MKL1Q969V6 931 aa20.07■□□□□ 0.8
RAPGEF3-212ENST00000490387 COA7Q96BR5 231 aa20.07■□□□□ 0.8
RAPGEF3-212ENST00000490387 JAKMIP1Q96N16 626 aaKnown RBP20.07■□□□□ 0.8
RAPGEF3-212ENST00000490387 FEZ1Q99689 392 aa20.07■□□□□ 0.8
RAPGEF3-212ENST00000490387 TM6SF1Q9BZW5 370 aa20.07■□□□□ 0.8
RAPGEF3-212ENST00000490387 WDR19Q8NEZ3 1342 aa20.06■□□□□ 0.8
RAPGEF3-212ENST00000490387 TTLL1O95922 423 aa20.06■□□□□ 0.8
RAPGEF3-212ENST00000490387 HOXA7P31268 230 aaPredicted RBP20.06■□□□□ 0.8
RAPGEF3-212ENST00000490387 FLT3LGP49771 235 aa20.06■□□□□ 0.8
RAPGEF3-212ENST00000490387 UBXN2AP68543 259 aa20.06■□□□□ 0.8
RAPGEF3-212ENST00000490387 MTFR1Q15390 333 aa20.06■□□□□ 0.8
RAPGEF3-212ENST00000490387 SEC23AQ15436 765 aa20.06■□□□□ 0.8
RAPGEF3-212ENST00000490387 IQCA1Q86XH1 822 aa20.06■□□□□ 0.8
RAPGEF3-212ENST00000490387 ZSCAN10Q96SZ4 725 aaPredicted RBP20.06■□□□□ 0.8
RAPGEF3-212ENST00000490387 ZKSCAN3Q9BRR0 538 aa20.06■□□□□ 0.8
RAPGEF3-212ENST00000490387 MTA3Q9BTC8 594 aa20.06■□□□□ 0.8
RAPGEF3-212ENST00000490387 C22orf23Q9BZE7 217 aa20.06■□□□□ 0.8
RAPGEF3-212ENST00000490387 KIAA1683Q9H0B3 1180 aa20.06■□□□□ 0.8
RAPGEF3-212ENST00000490387 SYNPO2Q9UMS6 1093 aa20.06■□□□□ 0.8
RAPGEF3-212ENST00000490387 TMX2Q9Y320 296 aa20.06■□□□□ 0.8
RAPGEF3-212ENST00000490387 TNKSO95271 1327 aa20.05■□□□□ 0.8
RAPGEF3-212ENST00000490387 HMGB1P09429 215 aaKnown RBP20.05■□□□□ 0.8
RAPGEF3-212ENST00000490387 MCM5P33992 734 aa20.05■□□□□ 0.8
RAPGEF3-212ENST00000490387 ZYXQ15942 572 aaKnown RBP20.05■□□□□ 0.8
RAPGEF3-212ENST00000490387 PPP4R3BQ5MIZ7 849 aa20.05■□□□□ 0.8
RAPGEF3-212ENST00000490387 DHX32Q7L7V1 743 aaKnown RBP20.05■□□□□ 0.8
RAPGEF3-212ENST00000490387 DGKHQ86XP1 1220 aa20.05■□□□□ 0.8
RAPGEF3-212ENST00000490387 ENAHQ8N8S7 591 aaPredicted RBP20.05■□□□□ 0.8
RAPGEF3-212ENST00000490387 TTC14Q96N46 770 aa20.05■□□□□ 0.8
RAPGEF3-212ENST00000490387 TBC1D32Q96NH3 1257 aa20.05■□□□□ 0.8
RAPGEF3-212ENST00000490387 KIF2CQ99661 725 aa20.05■□□□□ 0.8
RAPGEF3-212ENST00000490387 ZSWIM6Q9HCJ5 1215 aa20.05■□□□□ 0.8
RAPGEF3-212ENST00000490387 MKI67P46013 3256 aaKnown RBP20.05■□□□□ 0.8
RAPGEF3-212ENST00000490387 PRC1O43663 620 aa20.04■□□□□ 0.8
RAPGEF3-212ENST00000490387 ADCY3O60266 1144 aa20.04■□□□□ 0.8
RAPGEF3-212ENST00000490387 PSMA5P28066 241 aa20.04■□□□□ 0.8
RAPGEF3-212ENST00000490387 IRF5Q13568 498 aa20.04■□□□□ 0.8
RAPGEF3-212ENST00000490387 CCDC178Q5BJE1 867 aa20.04■□□□□ 0.8
RAPGEF3-212ENST00000490387 CHST3Q7LGC8 479 aa20.04■□□□□ 0.8
RAPGEF3-212ENST00000490387 IGDCC4Q8TDY8 1250 aa20.04■□□□□ 0.8
RAPGEF3-212ENST00000490387 UBAC1Q9BSL1 405 aa20.04■□□□□ 0.8
RAPGEF3-212ENST00000490387 UPF2Q9HAU5 1272 aaKnown RBP20.04■□□□□ 0.8
RAPGEF3-212ENST00000490387 ARHGEF10LQ9HCE6 1279 aa20.04■□□□□ 0.8
RAPGEF3-212ENST00000490387 EMILIN3Q9NT22 766 aa20.04■□□□□ 0.8
RAPGEF3-212ENST00000490387 CCL5P13501 91 aa20.03■□□□□ 0.8
RAPGEF3-212ENST00000490387 CPA1P15085 419 aa20.03■□□□□ 0.8
RAPGEF3-212ENST00000490387 CASTP20810 708 aaKnown RBP20.03■□□□□ 0.8
RAPGEF3-212ENST00000490387 USP14P54578 494 aa20.03■□□□□ 0.8
RAPGEF3-212ENST00000490387 HERVK_113P62684 666 aa20.03■□□□□ 0.8
RAPGEF3-212ENST00000490387 C12orf42Q96LP6 360 aa20.03■□□□□ 0.8
RAPGEF3-212ENST00000490387 P2RX7Q99572 595 aaKnown RBP20.03■□□□□ 0.8
RAPGEF3-212ENST00000490387 MORF4L1Q9UBU8 362 aa20.03■□□□□ 0.8
RAPGEF3-212ENST00000490387 CLIP2Q9UDT6 1046 aa20.03■□□□□ 0.8
RAPGEF3-212ENST00000490387 STX8Q9UNK0 236 aa20.03■□□□□ 0.8
RAPGEF3-212ENST00000490387 SH2B2O14492 632 aaPredicted RBP20.02■□□□□ 0.8
RAPGEF3-212ENST00000490387 ELNP15502 786 aa20.02■□□□□ 0.8
RAPGEF3-212ENST00000490387 RPS6KB1P23443 525 aa20.02■□□□□ 0.8
RAPGEF3-212ENST00000490387 KIAA1755Q5JYT7 1200 aa20.02■□□□□ 0.8
RAPGEF3-212ENST00000490387 BLOC1S2Q6QNY1 142 aa20.02■□□□□ 0.8
RAPGEF3-212ENST00000490387 FBXL16Q8N461 479 aa20.02■□□□□ 0.8
RAPGEF3-212ENST00000490387 PXYLP1Q8TE99 480 aa20.02■□□□□ 0.8
RAPGEF3-212ENST00000490387 GTF3C2Q8WUA4 911 aaPredicted RBP20.02■□□□□ 0.8
RAPGEF3-212ENST00000490387 TMEM87BQ96K49 555 aa20.02■□□□□ 0.8
RAPGEF3-212ENST00000490387 TMEM47Q9BQJ4 181 aa20.02■□□□□ 0.8
RAPGEF3-212ENST00000490387 RNF208Q9H0X6 261 aa20.02■□□□□ 0.8
RAPGEF3-212ENST00000490387 SH2D4AQ9H788 454 aa20.02■□□□□ 0.8
RAPGEF3-212ENST00000490387 SENP2Q9HC62 589 aa20.02■□□□□ 0.8
RAPGEF3-212ENST00000490387 GPHNQ9NQX3 736 aaPredicted RBP20.02■□□□□ 0.8
RAPGEF3-212ENST00000490387 IFIT3O14879 490 aaKnown RBP20.01■□□□□ 0.79
RAPGEF3-212ENST00000490387 TOP1P11387 765 aaKnown RBP20.01■□□□□ 0.79
RAPGEF3-212ENST00000490387 ATP2B2Q01814 1243 aa20.01■□□□□ 0.79
RAPGEF3-212ENST00000490387 RUFY3Q7L099 469 aa20.01■□□□□ 0.79
RAPGEF3-212ENST00000490387 LRRC47Q8N1G4 583 aaKnown RBP20.01■□□□□ 0.79
RAPGEF3-212ENST00000490387 GMCL1P1Q8NEA9 526 aa20.01■□□□□ 0.79
RAPGEF3-212ENST00000490387 GPRC5AQ8NFJ5 357 aa20.01■□□□□ 0.79
RAPGEF3-212ENST00000490387 TCEANC2Q96MN5 208 aa20.01■□□□□ 0.79
RAPGEF3-212ENST00000490387 VCPKMTQ9H867 229 aa20.01■□□□□ 0.79
RAPGEF3-212ENST00000490387 LY9Q9HBG7 655 aa20.01■□□□□ 0.79
RAPGEF3-212ENST00000490387 PARP14Q460N5 1801 aa20■□□□□ 0.79
RAPGEF3-212ENST00000490387 INHAP05111 366 aa20■□□□□ 0.79
RAPGEF3-212ENST00000490387 SART3Q15020 963 aaKnown RBP20■□□□□ 0.79
RAPGEF3-212ENST00000490387 TMEM67Q5HYA8 995 aa20■□□□□ 0.79
RAPGEF3-212ENST00000490387 PAGR1Q9BTK6 254 aa20■□□□□ 0.79
RAPGEF3-212ENST00000490387 LRRC2Q9BYS8 371 aa20■□□□□ 0.79
RAPGEF3-212ENST00000490387 AGXT2Q9BYV1 514 aa20■□□□□ 0.79
RAPGEF3-212ENST00000490387 UPF3BQ9BZI7 483 aaKnown RBP20■□□□□ 0.79
RAPGEF3-212ENST00000490387 TXNRD2Q9NNW7 524 aa20■□□□□ 0.79
RAPGEF3-212ENST00000490387 USP17L15C9J2P7 530 aa19.99■□□□□ 0.79
RAPGEF3-212ENST00000490387 USP17L13C9JLJ4 530 aa19.99■□□□□ 0.79
RAPGEF3-212ENST00000490387 USP17L11C9JVI0 530 aa19.99■□□□□ 0.79
RAPGEF3-212ENST00000490387 USP17L18D6R9N7 530 aa19.99■□□□□ 0.79
RAPGEF3-212ENST00000490387 USP17L22D6RA61 530 aa19.99■□□□□ 0.79
RAPGEF3-212ENST00000490387 USP17L17D6RBQ6 530 aa19.99■□□□□ 0.79
RAPGEF3-212ENST00000490387 USP17L19D6RCP7 530 aa19.99■□□□□ 0.79
RAPGEF3-212ENST00000490387 USP17L20D6RJB6 530 aa19.99■□□□□ 0.79
RAPGEF3-212ENST00000490387 GJB1P08034 283 aa19.99■□□□□ 0.79
RAPGEF3-212ENST00000490387 VCAM1P19320 739 aa19.99■□□□□ 0.79
RAPGEF3-212ENST00000490387 LIFRP42702 1097 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms