RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 SPATC1LQ9H0A9 340 aa22.63■■□□□ 1.21
EPHB4-207ENST00000489808 RNF41Q9H4P4 317 aaPredicted RBP22.63■■□□□ 1.21
EPHB4-207ENST00000489808 CTNNA3Q9UI47 895 aa22.63■■□□□ 1.21
EPHB4-207ENST00000489808 PPP1R9AQ9ULJ8 1098 aa22.63■■□□□ 1.21
EPHB4-207ENST00000489808 RAD50Q92878 1312 aa22.62■■□□□ 1.21
EPHB4-207ENST00000489808 UBXN2AP68543 259 aa22.62■■□□□ 1.21
EPHB4-207ENST00000489808 MTFR1Q15390 333 aa22.62■■□□□ 1.21
EPHB4-207ENST00000489808 MORN1Q5T089 497 aa22.62■■□□□ 1.21
EPHB4-207ENST00000489808 SLFN13Q68D06 897 aa22.62■■□□□ 1.21
EPHB4-207ENST00000489808 TBC1D10CQ8IV04 446 aa22.62■■□□□ 1.21
EPHB4-207ENST00000489808 USP6NLQ92738 828 aa22.62■■□□□ 1.21
EPHB4-207ENST00000489808 CCDC136Q96JN2 1154 aa22.62■■□□□ 1.21
EPHB4-207ENST00000489808 MOV10L1Q9BXT6 1211 aaKnown RBP22.62■■□□□ 1.21
EPHB4-207ENST00000489808 TCP11L1Q9NUJ3 509 aa22.62■■□□□ 1.21
EPHB4-207ENST00000489808 STX8Q9UNK0 236 aa22.62■■□□□ 1.21
EPHB4-207ENST00000489808 MYH8P13535 1937 aa22.61■■□□□ 1.21
EPHB4-207ENST00000489808 CYP2B6P20813 491 aa22.61■■□□□ 1.21
EPHB4-207ENST00000489808 MLLT1Q03111 559 aaPredicted RBP22.61■■□□□ 1.21
EPHB4-207ENST00000489808 SKAP1Q86WV1 359 aa22.61■■□□□ 1.21
EPHB4-207ENST00000489808 SOCS4Q8WXH5 440 aa22.61■■□□□ 1.21
EPHB4-207ENST00000489808 CWC22Q9HCG8 908 aaKnown RBP22.61■■□□□ 1.21
EPHB4-207ENST00000489808 GREB1LQ9C091 1923 aaPredicted RBP22.61■■□□□ 1.21
EPHB4-207ENST00000489808 VWA5AO00534 786 aa22.6■■□□□ 1.21
EPHB4-207ENST00000489808 NEFLP07196 543 aa22.6■■□□□ 1.21
EPHB4-207ENST00000489808 XRCC5P13010 732 aaKnown RBP22.6■■□□□ 1.21
EPHB4-207ENST00000489808 PTPREP23469 700 aa22.6■■□□□ 1.21
EPHB4-207ENST00000489808 TMEM132BQ14DG7 1078 aa22.6■■□□□ 1.21
EPHB4-207ENST00000489808 IMMTQ16891 758 aaKnown RBP22.6■■□□□ 1.21
EPHB4-207ENST00000489808 WDR78Q5VTH9 848 aa22.6■■□□□ 1.21
EPHB4-207ENST00000489808 SHCBP1Q8NEM2 672 aa22.6■■□□□ 1.21
EPHB4-207ENST00000489808 NKX2-3Q8TAU0 364 aa22.6■■□□□ 1.21
EPHB4-207ENST00000489808 SLF1Q9BQI6 1058 aa22.6■■□□□ 1.21
EPHB4-207ENST00000489808 SGSM2O43147 1006 aa22.59■■□□□ 1.21
EPHB4-207ENST00000489808 BMP3P12645 472 aa22.59■■□□□ 1.21
EPHB4-207ENST00000489808 EN2P19622 333 aaPredicted RBP22.59■■□□□ 1.21
EPHB4-207ENST00000489808 PLS1Q14651 629 aa22.59■■□□□ 1.21
EPHB4-207ENST00000489808 PRPF38AQ8NAV1 312 aaKnown RBP22.59■■□□□ 1.21
EPHB4-207ENST00000489808 FEM1BQ9UK73 627 aa22.59■■□□□ 1.21
EPHB4-207ENST00000489808 SLC15A5A6NIM6 579 aa22.58■■□□□ 1.21
EPHB4-207ENST00000489808 INHAP05111 366 aa22.58■■□□□ 1.21
EPHB4-207ENST00000489808 CCL5P13501 91 aa22.58■■□□□ 1.21
EPHB4-207ENST00000489808 ERCC3P19447 782 aa22.58■■□□□ 1.21
EPHB4-207ENST00000489808 RGS2P41220 211 aa22.58■■□□□ 1.21
EPHB4-207ENST00000489808 NT5C2P49902 561 aa22.58■■□□□ 1.21
EPHB4-207ENST00000489808 REPS2Q8NFH8 660 aa22.58■■□□□ 1.21
EPHB4-207ENST00000489808 ESR2Q92731 530 aa22.58■■□□□ 1.21
EPHB4-207ENST00000489808 GMCL1Q96IK5 515 aa22.58■■□□□ 1.21
EPHB4-207ENST00000489808 STRNO43815 780 aa22.57■■□□□ 1.2
EPHB4-207ENST00000489808 MCCP23508 829 aa22.57■■□□□ 1.2
EPHB4-207ENST00000489808 STAT3P40763 770 aa22.57■■□□□ 1.2
EPHB4-207ENST00000489808 PTH1RQ03431 593 aa22.57■■□□□ 1.2
EPHB4-207ENST00000489808 MAP2K5Q13163 448 aa22.57■■□□□ 1.2
EPHB4-207ENST00000489808 TTC14Q96N46 770 aa22.57■■□□□ 1.2
EPHB4-207ENST00000489808 RNF208Q9H0X6 261 aa22.57■■□□□ 1.2
EPHB4-207ENST00000489808 MROH8Q9H579 483 aa22.57■■□□□ 1.2
EPHB4-207ENST00000489808 IVNS1ABPQ9Y6Y0 642 aa22.57■■□□□ 1.2
EPHB4-207ENST00000489808 MGAMO43451 1857 aa22.57■■□□□ 1.2
EPHB4-207ENST00000489808 NEDD4P46934 1319 aa22.57■■□□□ 1.2
EPHB4-207ENST00000489808 SLC25A27O95847 323 aa22.56■■□□□ 1.2
EPHB4-207ENST00000489808 HMGCRP04035 888 aa22.56■■□□□ 1.2
EPHB4-207ENST00000489808 TOP1P11387 765 aaKnown RBP22.56■■□□□ 1.2
EPHB4-207ENST00000489808 SLC1A4P43007 532 aa22.56■■□□□ 1.2
EPHB4-207ENST00000489808 GRB14Q14449 540 aa22.56■■□□□ 1.2
EPHB4-207ENST00000489808 BMP2KLQ5H9B9 411 aa22.56■■□□□ 1.2
EPHB4-207ENST00000489808 NCAPG2Q86XI2 1143 aa22.56■■□□□ 1.2
EPHB4-207ENST00000489808 TRMT44Q8IYL2 757 aaKnown RBP22.56■■□□□ 1.2
EPHB4-207ENST00000489808 TMEM47Q9BQJ4 181 aa22.56■■□□□ 1.2
EPHB4-207ENST00000489808 UNC93B1Q9H1C4 597 aa22.56■■□□□ 1.2
EPHB4-207ENST00000489808 DOCK3Q8IZD9 2030 aa22.56■■□□□ 1.2
EPHB4-207ENST00000489808 TMEM232C9JQI7 657 aa22.55■■□□□ 1.2
EPHB4-207ENST00000489808 GJB1P08034 283 aa22.55■■□□□ 1.2
EPHB4-207ENST00000489808 RCSD1Q6JBY9 416 aa22.55■■□□□ 1.2
EPHB4-207ENST00000489808 RIOX2Q8IUF8 465 aa22.55■■□□□ 1.2
EPHB4-207ENST00000489808 TRIB2Q92519 343 aa22.55■■□□□ 1.2
EPHB4-207ENST00000489808 KIFC2Q96AC6 838 aa22.55■■□□□ 1.2
EPHB4-207ENST00000489808 ZNF214Q9UL59 606 aaPredicted RBP22.55■■□□□ 1.2
EPHB4-207ENST00000489808 ZBED4O75132 1171 aa22.54■■□□□ 1.2
EPHB4-207ENST00000489808 KDM4AO75164 1064 aa22.54■■□□□ 1.2
EPHB4-207ENST00000489808 CENPBP07199 599 aaPredicted RBP22.54■■□□□ 1.2
EPHB4-207ENST00000489808 TRIM32Q13049 653 aa22.54■■□□□ 1.2
EPHB4-207ENST00000489808 CHURC1Q8WUH1 139 aa22.54■■□□□ 1.2
EPHB4-207ENST00000489808 CHMP4CQ96CF2 233 aa22.54■■□□□ 1.2
EPHB4-207ENST00000489808 APBA2Q99767 749 aa22.54■■□□□ 1.2
EPHB4-207ENST00000489808 ZSWIM5Q9P217 1185 aa22.54■■□□□ 1.2
EPHB4-207ENST00000489808 U3KPZ7 1027 aaPredicted RBP22.54■■□□□ 1.2
EPHB4-207ENST00000489808 RLFQ13129 1914 aa22.54■■□□□ 1.2
EPHB4-207ENST00000489808 B4E1Z4 1266 aa22.53■■□□□ 1.2
EPHB4-207ENST00000489808 PLA2G6O60733 806 aa22.53■■□□□ 1.2
EPHB4-207ENST00000489808 HOXC6P09630 235 aa22.53■■□□□ 1.2
EPHB4-207ENST00000489808 CCL14Q16627 93 aa22.53■■□□□ 1.2
EPHB4-207ENST00000489808 FAM160B2Q86V87 743 aa22.53■■□□□ 1.2
EPHB4-207ENST00000489808 DGKHQ86XP1 1220 aa22.53■■□□□ 1.2
EPHB4-207ENST00000489808 ABRAQ8N0Z2 381 aa22.53■■□□□ 1.2
EPHB4-207ENST00000489808 MAP4K1Q92918 833 aa22.53■■□□□ 1.2
EPHB4-207ENST00000489808 KRT23Q9C075 422 aa22.53■■□□□ 1.2
EPHB4-207ENST00000489808 SLC38A10Q9HBR0 1119 aa22.53■■□□□ 1.2
EPHB4-207ENST00000489808 KIAA0100Q14667 2235 aaKnown RBP22.53■■□□□ 1.2
EPHB4-207ENST00000489808 BRCA2P51587 3418 aa22.53■■□□□ 1.2
EPHB4-207ENST00000489808 ATP2A1O14983 1001 aa22.52■■□□□ 1.2
EPHB4-207ENST00000489808 ZKSCAN1P17029 563 aaPredicted RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms