RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 SURF6O75683 361 aaKnown RBP9.54□□□□□ -0.88
SMC6-209ENST00000489535 WNT11O96014 354 aa9.54□□□□□ -0.88
SMC6-209ENST00000489535 GPTP24298 496 aa9.54□□□□□ -0.88
SMC6-209ENST00000489535 MCM6Q14566 821 aa9.54□□□□□ -0.88
SMC6-209ENST00000489535 EPHA10Q5JZY3 1008 aa9.54□□□□□ -0.88
SMC6-209ENST00000489535 GDF6Q6KF10 455 aaPredicted RBP9.54□□□□□ -0.88
SMC6-209ENST00000489535 TLR7Q9NYK1 1049 aaKnown RBP9.54□□□□□ -0.88
SMC6-209ENST00000489535 RGS17Q9UGC6 210 aaPredicted RBP9.54□□□□□ -0.88
SMC6-209ENST00000489535 TNRC6CQ9HCJ0 1690 aaKnown RBP9.53□□□□□ -0.88
SMC6-209ENST00000489535 RAB11FIP3O75154 756 aa9.53□□□□□ -0.88
SMC6-209ENST00000489535 CAMTA2O94983 1202 aa9.53□□□□□ -0.88
SMC6-209ENST00000489535 PCCAP05165 728 aaPredicted RBP9.53□□□□□ -0.88
SMC6-209ENST00000489535 ARSDP51689 593 aa9.53□□□□□ -0.88
SMC6-209ENST00000489535 OS9Q13438 667 aaPredicted RBP9.53□□□□□ -0.88
SMC6-209ENST00000489535 RABL6Q3YEC7 729 aaPredicted RBP9.53□□□□□ -0.88
SMC6-209ENST00000489535 NLRP10Q86W26 655 aa9.53□□□□□ -0.88
SMC6-209ENST00000489535 ZNF594Q96JF6 807 aaPredicted RBP9.53□□□□□ -0.88
SMC6-209ENST00000489535 BACH2Q9BYV9 841 aa9.53□□□□□ -0.88
SMC6-209ENST00000489535 LRRCC1Q9C099 1032 aa9.53□□□□□ -0.88
SMC6-209ENST00000489535 C7orf69Q9H7B7 122 aa9.53□□□□□ -0.88
SMC6-209ENST00000489535 ANKRD31Q8N7Z5 1873 aa9.53□□□□□ -0.88
SMC6-209ENST00000489535 CDHR2Q9BYE9 1310 aa9.53□□□□□ -0.88
SMC6-209ENST00000489535 J3QW42 95 aa9.52□□□□□ -0.89
SMC6-209ENST00000489535 RPS6KA4O75676 772 aa9.52□□□□□ -0.89
SMC6-209ENST00000489535 ARID4AP29374 1257 aaPredicted RBP9.52□□□□□ -0.89
SMC6-209ENST00000489535 FOXO4P98177 505 aa9.52□□□□□ -0.89
SMC6-209ENST00000489535 C8orf34Q49A92 452 aa9.52□□□□□ -0.89
SMC6-209ENST00000489535 HSP90AB4PQ58FF6 505 aa9.52□□□□□ -0.89
SMC6-209ENST00000489535 RNF43Q68DV7 783 aa9.52□□□□□ -0.89
SMC6-209ENST00000489535 TRIM42Q8IWZ5 723 aa9.52□□□□□ -0.89
SMC6-209ENST00000489535 C16orf71Q8IYS4 520 aaPredicted RBP9.52□□□□□ -0.89
SMC6-209ENST00000489535 ZNF34Q8IZ26 560 aa9.52□□□□□ -0.89
SMC6-209ENST00000489535 FAM89AQ96GI7 184 aa9.52□□□□□ -0.89
SMC6-209ENST00000489535 KRTAP4-5Q9BYR2 181 aa9.52□□□□□ -0.89
SMC6-209ENST00000489535 KLK14Q9P0G3 267 aa9.52□□□□□ -0.89
SMC6-209ENST00000489535 MKRN1Q9UHC7 482 aaKnown RBP9.52□□□□□ -0.89
SMC6-209ENST00000489535 PA2G4Q9UQ80 394 aaKnown RBP9.52□□□□□ -0.89
SMC6-209ENST00000489535 UBN2Q6ZU65 1347 aa9.52□□□□□ -0.89
SMC6-209ENST00000489535 AKAP11Q9UKA4 1901 aa9.51□□□□□ -0.89
SMC6-209ENST00000489535 WISP1O95388 367 aa9.51□□□□□ -0.89
SMC6-209ENST00000489535 G3BP1Q13283 466 aaKnown RBP eCLIP9.51□□□□□ -0.89
SMC6-209ENST00000489535 LMBR1LQ6UX01 489 aa9.51□□□□□ -0.89
SMC6-209ENST00000489535 ZBTB38Q8NAP3 1195 aaPredicted RBP9.51□□□□□ -0.89
SMC6-209ENST00000489535 KIF1BPQ96EK5 621 aa9.51□□□□□ -0.89
SMC6-209ENST00000489535 DBNDD2Q9BQY9 259 aa9.51□□□□□ -0.89
SMC6-209ENST00000489535 IL1RAPL2Q9NP60 686 aa9.51□□□□□ -0.89
SMC6-209ENST00000489535 TRMT112Q9UI30 125 aaKnown RBP9.51□□□□□ -0.89
SMC6-209ENST00000489535 ZNF652Q9Y2D9 606 aa9.51□□□□□ -0.89
SMC6-209ENST00000489535 NOP58Q9Y2X3 529 aaKnown RBP9.51□□□□□ -0.89
SMC6-209ENST00000489535 RTCBQ9Y3I0 505 aaKnown RBP9.51□□□□□ -0.89
SMC6-209ENST00000489535 RBM19Q9Y4C8 960 aaKnown RBP9.51□□□□□ -0.89
SMC6-209ENST00000489535 LRP5O75197 1615 aa9.51□□□□□ -0.89
SMC6-209ENST00000489535 FAM177BA6PVY3 158 aa9.5□□□□□ -0.89
SMC6-209ENST00000489535 RFX5P48382 616 aaPredicted RBP9.5□□□□□ -0.89
SMC6-209ENST00000489535 PARP10Q53GL7 1025 aa9.5□□□□□ -0.89
SMC6-209ENST00000489535 SMIM5Q71RC9 77 aa9.5□□□□□ -0.89
SMC6-209ENST00000489535 ERC1Q8IUD2 1116 aa9.5□□□□□ -0.89
SMC6-209ENST00000489535 GALNT11Q8NCW6 608 aa9.5□□□□□ -0.89
SMC6-209ENST00000489535 KLHDC4Q8TBB5 520 aa9.5□□□□□ -0.89
SMC6-209ENST00000489535 OTUD7AQ8TE49 926 aaPredicted RBP9.5□□□□□ -0.89
SMC6-209ENST00000489535 ADAMTS19Q8TE59 1207 aa9.5□□□□□ -0.89
SMC6-209ENST00000489535 UCN2Q96RP3 112 aa9.5□□□□□ -0.89
SMC6-209ENST00000489535 PLA2G12BQ9BX93 195 aa9.5□□□□□ -0.89
SMC6-209ENST00000489535 SIL1Q9H173 461 aa9.5□□□□□ -0.89
SMC6-209ENST00000489535 NARFQ9UHQ1 456 aa9.5□□□□□ -0.89
SMC6-209ENST00000489535 NIP7Q9Y221 180 aaKnown RBP eCLIP9.5□□□□□ -0.89
SMC6-209ENST00000489535 NRXN2Q9P2S2 1712 aa9.5□□□□□ -0.89
SMC6-209ENST00000489535 HMX2A2RU54 273 aa9.49□□□□□ -0.89
SMC6-209ENST00000489535 RASA1P20936 1047 aa9.49□□□□□ -0.89
SMC6-209ENST00000489535 PTPN12Q05209 780 aaKnown RBP9.49□□□□□ -0.89
SMC6-209ENST00000489535 UVSSAQ2YD98 709 aa9.49□□□□□ -0.89
SMC6-209ENST00000489535 TTC22Q5TAA0 569 aa9.49□□□□□ -0.89
SMC6-209ENST00000489535 SUSD4Q5VX71 490 aa9.49□□□□□ -0.89
SMC6-209ENST00000489535 USPL1Q5W0Q7 1092 aa9.49□□□□□ -0.89
SMC6-209ENST00000489535 OGFOD2Q6N063 350 aa9.49□□□□□ -0.89
SMC6-209ENST00000489535 CLEC4GQ6UXB4 293 aa9.49□□□□□ -0.89
SMC6-209ENST00000489535 SYNE4Q8N205 404 aa9.49□□□□□ -0.89
SMC6-209ENST00000489535 FAM46AQ96IP4 442 aaKnown RBP9.49□□□□□ -0.89
SMC6-209ENST00000489535 CEP41Q9BYV8 373 aa9.49□□□□□ -0.89
SMC6-209ENST00000489535 COPRSQ9NQ92 184 aa9.49□□□□□ -0.89
SMC6-209ENST00000489535 SALL3Q9BXA9 1300 aa9.49□□□□□ -0.89
SMC6-209ENST00000489535 DOCK2Q92608 1830 aa9.49□□□□□ -0.89
SMC6-209ENST00000489535 CCDC88AQ3V6T2 1871 aa9.49□□□□□ -0.89
SMC6-209ENST00000489535 IRS4O14654 1257 aaPredicted RBP9.48□□□□□ -0.89
SMC6-209ENST00000489535 PDE8AO60658 829 aa9.48□□□□□ -0.89
SMC6-209ENST00000489535 SASH1O94885 1247 aa9.48□□□□□ -0.89
SMC6-209ENST00000489535 TXNRD1Q16881 649 aa9.48□□□□□ -0.89
SMC6-209ENST00000489535 BMP2KLQ5H9B9 411 aa9.48□□□□□ -0.89
SMC6-209ENST00000489535 UTP4Q969X6 686 aaKnown RBP9.48□□□□□ -0.89
SMC6-209ENST00000489535 UTP14AQ9BVJ6 771 aaKnown RBP9.48□□□□□ -0.89
SMC6-209ENST00000489535 SRP68Q9UHB9 627 aaKnown RBP9.48□□□□□ -0.89
SMC6-209ENST00000489535 TRIM33Q9UPN9 1127 aa9.48□□□□□ -0.89
SMC6-209ENST00000489535 SH3TC1Q8TE82 1336 aa9.48□□□□□ -0.89
SMC6-209ENST00000489535 COL4A1P02462 1669 aa9.48□□□□□ -0.89
SMC6-209ENST00000489535 PLSCR1O15162 318 aa9.47□□□□□ -0.89
SMC6-209ENST00000489535 ATP9BO43861 1147 aa9.47□□□□□ -0.89
SMC6-209ENST00000489535 MICAL2O94851 1124 aa9.47□□□□□ -0.89
SMC6-209ENST00000489535 NTSR2O95665 410 aa9.47□□□□□ -0.89
SMC6-209ENST00000489535 EGFRP00533 1210 aa9.47□□□□□ -0.89
SMC6-209ENST00000489535 CSF1RP07333 972 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms