RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 UBE2ZQ9H832 354 aaPredicted RBP14.27□□□□□ -0.13
HDAC6-233ENST00000489352 SYNRGQ9UMZ2 1314 aa14.26□□□□□ -0.13
HDAC6-233ENST00000489352 GH2P01242 217 aa14.26□□□□□ -0.13
HDAC6-233ENST00000489352 KCNA5P22460 613 aa14.26□□□□□ -0.13
HDAC6-233ENST00000489352 CCL23P55773 120 aa14.26□□□□□ -0.13
HDAC6-233ENST00000489352 COG2Q14746 738 aa14.26□□□□□ -0.13
HDAC6-233ENST00000489352 RAB3GAP1Q15042 981 aa14.26□□□□□ -0.13
HDAC6-233ENST00000489352 SHROOM1Q2M3G4 852 aaPredicted RBP14.26□□□□□ -0.13
HDAC6-233ENST00000489352 PTCRAQ6ISU1 281 aaPredicted RBP14.26□□□□□ -0.13
HDAC6-233ENST00000489352 LENG1Q96BZ8 264 aaPredicted RBP14.26□□□□□ -0.13
HDAC6-233ENST00000489352 UPF3BQ9BZI7 483 aaKnown RBP14.26□□□□□ -0.13
HDAC6-233ENST00000489352 FAM184BQ9ULE4 1060 aa14.26□□□□□ -0.13
HDAC6-233ENST00000489352 SIPA1L1O43166 1804 aa14.26□□□□□ -0.13
HDAC6-233ENST00000489352 TRIOO75962 3097 aa14.26□□□□□ -0.13
HDAC6-233ENST00000489352 PTPRZ1P23471 2315 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-233ENST00000489352 EPOPA6NHQ4 379 aa14.25□□□□□ -0.13
HDAC6-233ENST00000489352 HLA-DOAP06340 250 aa14.25□□□□□ -0.13
HDAC6-233ENST00000489352 ASGR1P07306 291 aa14.25□□□□□ -0.13
HDAC6-233ENST00000489352 C6orf222P0C671 652 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-233ENST00000489352 GRB10Q13322 594 aa14.25□□□□□ -0.13
HDAC6-233ENST00000489352 PUS10Q3MIT2 529 aaKnown RBP14.25□□□□□ -0.13
HDAC6-233ENST00000489352 LEXMQ3ZCV2 418 aa14.25□□□□□ -0.13
HDAC6-233ENST00000489352 CCDC102BQ68D86 513 aa14.25□□□□□ -0.13
HDAC6-233ENST00000489352 FAM126BQ8IXS8 530 aa14.25□□□□□ -0.13
HDAC6-233ENST00000489352 ANKRD44Q8N8A2 993 aa14.25□□□□□ -0.13
HDAC6-233ENST00000489352 CACNA1BQ00975 2339 aa14.24□□□□□ -0.13
HDAC6-233ENST00000489352 POTEB3A0JP26 581 aa14.24□□□□□ -0.13
HDAC6-233ENST00000489352 IL9P15248 144 aa14.24□□□□□ -0.13
HDAC6-233ENST00000489352 TAL1P17542 331 aaPredicted RBP14.24□□□□□ -0.13
HDAC6-233ENST00000489352 POTEBQ6S5H4 581 aa14.24□□□□□ -0.13
HDAC6-233ENST00000489352 KLHDC9Q8NEP7 349 aa14.24□□□□□ -0.13
HDAC6-233ENST00000489352 ANKS1AQ92625 1134 aa14.24□□□□□ -0.13
HDAC6-233ENST00000489352 CDCA7LQ96GN5 454 aa14.24□□□□□ -0.13
HDAC6-233ENST00000489352 TANGO6Q9C0B7 1094 aa14.24□□□□□ -0.13
HDAC6-233ENST00000489352 KIAA1683Q9H0B3 1180 aa14.24□□□□□ -0.13
HDAC6-233ENST00000489352 LMCD1Q9NZU5 365 aa14.24□□□□□ -0.13
HDAC6-233ENST00000489352 RAI14Q9P0K7 980 aa14.24□□□□□ -0.13
HDAC6-233ENST00000489352 FAM50BQ9Y247 325 aa14.24□□□□□ -0.13
HDAC6-233ENST00000489352 CACNA1GO43497 2377 aa14.23□□□□□ -0.13
HDAC6-233ENST00000489352 BAG3O95817 575 aa14.23□□□□□ -0.13
HDAC6-233ENST00000489352 ACTN1P12814 892 aa14.23□□□□□ -0.13
HDAC6-233ENST00000489352 TAP1Q03518 808 aa14.23□□□□□ -0.13
HDAC6-233ENST00000489352 RASGRF1Q13972 1273 aa14.23□□□□□ -0.13
HDAC6-233ENST00000489352 GNASQ5JWF2 1037 aa14.23□□□□□ -0.13
HDAC6-233ENST00000489352 MB21D1Q8N884 522 aa14.23□□□□□ -0.13
HDAC6-233ENST00000489352 PRSS33Q8NF86 280 aa14.23□□□□□ -0.13
HDAC6-233ENST00000489352 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.23□□□□□ -0.13
HDAC6-233ENST00000489352 SH3RF3Q8TEJ3 882 aaPredicted RBP14.23□□□□□ -0.13
HDAC6-233ENST00000489352 MMP19Q99542 508 aa14.23□□□□□ -0.13
HDAC6-233ENST00000489352 SIL1Q9H173 461 aa14.23□□□□□ -0.13
HDAC6-233ENST00000489352 COL4A4P53420 1690 aaPredicted RBP14.23□□□□□ -0.13
HDAC6-233ENST00000489352 ROBO3Q96MS0 1386 aa14.22□□□□□ -0.13
HDAC6-233ENST00000489352 PDS5AQ29RF7 1337 aaKnown RBP14.22□□□□□ -0.13
HDAC6-233ENST00000489352 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-233ENST00000489352 ZNF865P0CJ78 1059 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-233ENST00000489352 PLCG2P16885 1265 aa14.22□□□□□ -0.13
HDAC6-233ENST00000489352 KCTD2Q14681 263 aa14.22□□□□□ -0.13
HDAC6-233ENST00000489352 CCDC27Q2M243 656 aa14.22□□□□□ -0.13
HDAC6-233ENST00000489352 MAPKAPK5Q8IW41 473 aa14.22□□□□□ -0.13
HDAC6-233ENST00000489352 TGFBRAP1Q8WUH2 860 aa14.22□□□□□ -0.13
HDAC6-233ENST00000489352 IRF2BPLQ9H1B7 796 aa14.22□□□□□ -0.13
HDAC6-233ENST00000489352 DNAJC18Q9H819 358 aa14.22□□□□□ -0.13
HDAC6-233ENST00000489352 CABP5Q9NP86 173 aa14.22□□□□□ -0.13
HDAC6-233ENST00000489352 PALD1Q9ULE6 856 aa14.22□□□□□ -0.13
HDAC6-233ENST00000489352 GRXCR2A6NFK2 248 aa14.21□□□□□ -0.13
HDAC6-233ENST00000489352 DUSP11O75319 330 aaKnown RBP14.21□□□□□ -0.13
HDAC6-233ENST00000489352 VAMP4O75379 141 aa14.21□□□□□ -0.13
HDAC6-233ENST00000489352 SLC25A27O95847 323 aa14.21□□□□□ -0.13
HDAC6-233ENST00000489352 CD4P01730 458 aa14.21□□□□□ -0.13
HDAC6-233ENST00000489352 PGK2P07205 417 aa14.21□□□□□ -0.13
HDAC6-233ENST00000489352 PFKMP08237 780 aa14.21□□□□□ -0.13
HDAC6-233ENST00000489352 PKN1Q16512 942 aa14.21□□□□□ -0.13
HDAC6-233ENST00000489352 CCSAPQ6IQ19 270 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-233ENST00000489352 SLC9A7Q96T83 725 aa14.21□□□□□ -0.13
HDAC6-233ENST00000489352 ZHX1Q9UKY1 873 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-233ENST00000489352 DIS3Q9Y2L1 958 aaKnown RBP14.21□□□□□ -0.13
HDAC6-233ENST00000489352 MYH1P12882 1939 aa14.21□□□□□ -0.14
HDAC6-233ENST00000489352 UMODL1Q5DID0 1318 aa14.2□□□□□ -0.14
HDAC6-233ENST00000489352 CST5P28325 142 aaPredicted RBP14.2□□□□□ -0.14
HDAC6-233ENST00000489352 ATG9AQ7Z3C6 839 aa14.2□□□□□ -0.14
HDAC6-233ENST00000489352 METTL16Q86W50 562 aaKnown RBP14.2□□□□□ -0.14
HDAC6-233ENST00000489352 SUGP1Q8IWZ8 645 aaKnown RBP14.2□□□□□ -0.14
HDAC6-233ENST00000489352 PHOSPHO2Q8TCD6 241 aa14.2□□□□□ -0.14
HDAC6-233ENST00000489352 NSUN4Q96CB9 384 aaKnown RBP14.2□□□□□ -0.14
HDAC6-233ENST00000489352 SAP30BPQ9UHR5 308 aaKnown RBP14.2□□□□□ -0.14
HDAC6-233ENST00000489352 FOCADQ5VW36 1801 aa14.2□□□□□ -0.14
HDAC6-233ENST00000489352 MYADML2A6NDP7 307 aa14.19□□□□□ -0.14
HDAC6-233ENST00000489352 TTLL4Q14679 1199 aa14.19□□□□□ -0.14
HDAC6-233ENST00000489352 ABCB5Q2M3G0 1257 aa14.19□□□□□ -0.14
HDAC6-233ENST00000489352 DEFB128Q7Z7B8 93 aa14.19□□□□□ -0.14
HDAC6-233ENST00000489352 ACER1Q8TDN7 264 aa14.19□□□□□ -0.14
HDAC6-233ENST00000489352 ATOH1Q92858 354 aaPredicted RBP14.19□□□□□ -0.14
HDAC6-233ENST00000489352 SCLYQ96I15 445 aa14.19□□□□□ -0.14
HDAC6-233ENST00000489352 FAM86C1Q9NVL1 165 aa14.19□□□□□ -0.14
HDAC6-233ENST00000489352 AATFQ9NY61 560 aaKnown RBP eCLIP14.19□□□□□ -0.14
HDAC6-233ENST00000489352 LRP2BPQ9P2M1 347 aa14.19□□□□□ -0.14
HDAC6-233ENST00000489352 COL11A1P12107 1806 aaPredicted RBP14.18□□□□□ -0.14
HDAC6-233ENST00000489352 ZBTB22O15209 634 aa14.18□□□□□ -0.14
HDAC6-233ENST00000489352 ADORA1P30542 326 aa14.18□□□□□ -0.14
HDAC6-233ENST00000489352 ID4P47928 161 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms