RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 LINC01356Q8N9X3 169 aa6.32□□□□□ -1.4
CBWD1-216ENST00000489272 PHC3Q8NDX5 983 aa6.32□□□□□ -1.4
CBWD1-216ENST00000489272 PIWIL2Q8TC59 973 aaKnown RBP6.32□□□□□ -1.4
CBWD1-216ENST00000489272 ZSWIM5Q9P217 1185 aa6.32□□□□□ -1.4
CBWD1-216ENST00000489272 USP31Q70CQ4 1352 aa6.31□□□□□ -1.4
CBWD1-216ENST00000489272 CTSHP09668 335 aa6.31□□□□□ -1.4
CBWD1-216ENST00000489272 TIGD5Q53EQ6 642 aa6.31□□□□□ -1.4
CBWD1-216ENST00000489272 CCDC84Q86UT8 332 aaPredicted RBP6.31□□□□□ -1.4
CBWD1-216ENST00000489272 ZFPM1Q8IX07 1006 aa6.31□□□□□ -1.4
CBWD1-216ENST00000489272 ACSF2Q96CM8 615 aaPredicted RBP6.31□□□□□ -1.4
CBWD1-216ENST00000489272 FAM161BQ96MY7 647 aa6.31□□□□□ -1.4
CBWD1-216ENST00000489272 MRS2Q9HD23 443 aa6.31□□□□□ -1.4
CBWD1-216ENST00000489272 SORBS3O60504 671 aa6.3□□□□□ -1.4
CBWD1-216ENST00000489272 TACR2P21452 398 aa6.3□□□□□ -1.4
CBWD1-216ENST00000489272 ACVRL1P37023 503 aa6.3□□□□□ -1.4
CBWD1-216ENST00000489272 ITGAEP38570 1179 aa6.3□□□□□ -1.4
CBWD1-216ENST00000489272 HNRNPA0Q13151 305 aaKnown RBP6.3□□□□□ -1.4
CBWD1-216ENST00000489272 TMPRSS7Q7RTY8 843 aa6.3□□□□□ -1.4
CBWD1-216ENST00000489272 FBXO33Q7Z6M2 555 aa6.3□□□□□ -1.4
CBWD1-216ENST00000489272 PLCG1P19174 1290 aa6.29□□□□□ -1.4
CBWD1-216ENST00000489272 YARSP54577 528 aaKnown RBP6.29□□□□□ -1.4
CBWD1-216ENST00000489272 EPHB3P54753 998 aa6.29□□□□□ -1.4
CBWD1-216ENST00000489272 NR0B2Q15466 257 aa6.29□□□□□ -1.4
CBWD1-216ENST00000489272 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.29□□□□□ -1.4
CBWD1-216ENST00000489272 OXR1Q8N573 874 aa6.29□□□□□ -1.4
CBWD1-216ENST00000489272 FAM13CQ8NE31 585 aa6.29□□□□□ -1.4
CBWD1-216ENST00000489272 DNAJB8Q8NHS0 232 aa6.29□□□□□ -1.4
CBWD1-216ENST00000489272 CYB5D2Q8WUJ1 264 aa6.29□□□□□ -1.4
CBWD1-216ENST00000489272 SMPD4Q9NXE4 827 aa6.29□□□□□ -1.4
CBWD1-216ENST00000489272 VTI1BQ9UEU0 232 aa6.29□□□□□ -1.4
CBWD1-216ENST00000489272 CEP131Q9UPN4 1083 aa6.29□□□□□ -1.4
CBWD1-216ENST00000489272 CORINQ9Y5Q5 1042 aa6.29□□□□□ -1.4
CBWD1-216ENST00000489272 F6X3S4 739 aa6.28□□□□□ -1.4
CBWD1-216ENST00000489272 IRS4O14654 1257 aaPredicted RBP6.28□□□□□ -1.4
CBWD1-216ENST00000489272 N4BP3O15049 544 aa6.28□□□□□ -1.4
CBWD1-216ENST00000489272 PF4P02776 101 aa6.28□□□□□ -1.4
CBWD1-216ENST00000489272 LMNB2Q03252 620 aa6.28□□□□□ -1.4
CBWD1-216ENST00000489272 CAMK2GQ13555 558 aaPredicted RBP6.28□□□□□ -1.4
CBWD1-216ENST00000489272 UBXN11Q5T124 520 aa6.28□□□□□ -1.4
CBWD1-216ENST00000489272 CNKSR3Q6P9H4 555 aa6.28□□□□□ -1.4
CBWD1-216ENST00000489272 BNC2Q6ZN30 1099 aaPredicted RBP6.28□□□□□ -1.4
CBWD1-216ENST00000489272 GATAD2BQ8WXI9 593 aa6.28□□□□□ -1.4
CBWD1-216ENST00000489272 TRIT1Q9H3H1 467 aaKnown RBP6.28□□□□□ -1.4
CBWD1-216ENST00000489272 FAM221AA4D161 298 aa6.27□□□□□ -1.41
CBWD1-216ENST00000489272 FITM1A5D6W6 292 aa6.27□□□□□ -1.41
CBWD1-216ENST00000489272 ERCC3P19447 782 aa6.27□□□□□ -1.41
CBWD1-216ENST00000489272 PWP1Q13610 501 aa6.27□□□□□ -1.41
CBWD1-216ENST00000489272 TMEM201Q5SNT2 666 aa6.27□□□□□ -1.41
CBWD1-216ENST00000489272 CPZQ66K79 652 aa6.27□□□□□ -1.41
CBWD1-216ENST00000489272 Q8N1X5 172 aa6.27□□□□□ -1.41
CBWD1-216ENST00000489272 TP53I13Q8NBR0 393 aaPredicted RBP6.27□□□□□ -1.41
CBWD1-216ENST00000489272 VWCEQ96DN2 955 aa6.27□□□□□ -1.41
CBWD1-216ENST00000489272 RHOVQ96L33 236 aa6.27□□□□□ -1.41
CBWD1-216ENST00000489272 Q96M66 194 aa6.27□□□□□ -1.41
CBWD1-216ENST00000489272 GPATCH2Q9NW75 528 aa6.27□□□□□ -1.41
CBWD1-216ENST00000489272 F13A1P00488 732 aa6.26□□□□□ -1.41
CBWD1-216ENST00000489272 TPP2P29144 1249 aaPredicted RBP6.26□□□□□ -1.41
CBWD1-216ENST00000489272 GBP2P32456 591 aaPredicted RBP6.26□□□□□ -1.41
CBWD1-216ENST00000489272 SRSF3P84103 164 aaKnown RBP6.26□□□□□ -1.41
CBWD1-216ENST00000489272 CREG2Q8IUH2 290 aa6.26□□□□□ -1.41
CBWD1-216ENST00000489272 RELL1Q8IUW5 271 aa6.26□□□□□ -1.41
CBWD1-216ENST00000489272 PPP1R13LQ8WUF5 828 aa6.26□□□□□ -1.41
CBWD1-216ENST00000489272 TMEM74Q96NL1 305 aa6.26□□□□□ -1.41
CBWD1-216ENST00000489272 KRTAP3-1Q9BYR8 98 aa6.26□□□□□ -1.41
CBWD1-216ENST00000489272 KCNH3Q9ULD8 1083 aa6.26□□□□□ -1.41
CBWD1-216ENST00000489272 UPK3BL1B0FP48 263 aa6.25□□□□□ -1.41
CBWD1-216ENST00000489272 UPK3BL2E5RIL1 263 aa6.25□□□□□ -1.41
CBWD1-216ENST00000489272 HRKO00198 91 aa6.25□□□□□ -1.41
CBWD1-216ENST00000489272 ZGLP1P0C6A0 271 aa6.25□□□□□ -1.41
CBWD1-216ENST00000489272 TNNI2P48788 182 aa6.25□□□□□ -1.41
CBWD1-216ENST00000489272 CCDC27Q2M243 656 aa6.25□□□□□ -1.41
CBWD1-216ENST00000489272 GAB4Q2WGN9 574 aa6.25□□□□□ -1.41
CBWD1-216ENST00000489272 SNAP47Q5SQN1 464 aa6.25□□□□□ -1.41
CBWD1-216ENST00000489272 FAM129CQ86XR2 697 aa6.25□□□□□ -1.41
CBWD1-216ENST00000489272 SLFN12Q8IYM2 578 aa6.25□□□□□ -1.41
CBWD1-216ENST00000489272 TMEFF1Q8IYR6 380 aa6.25□□□□□ -1.41
CBWD1-216ENST00000489272 DTWD2Q8NBA8 298 aa6.25□□□□□ -1.41
CBWD1-216ENST00000489272 RNF141Q8WVD5 230 aa6.25□□□□□ -1.41
CBWD1-216ENST00000489272 C1QTNF3Q9BXJ4 246 aa6.25□□□□□ -1.41
CBWD1-216ENST00000489272 GPR62Q9BZJ7 368 aa6.25□□□□□ -1.41
CBWD1-216ENST00000489272 DUSP15Q9H1R2 295 aaPredicted RBP6.25□□□□□ -1.41
CBWD1-216ENST00000489272 SIRT5Q9NXA8 310 aa6.25□□□□□ -1.41
CBWD1-216ENST00000489272 PRR36Q9H6K5 1346 aa6.25□□□□□ -1.41
CBWD1-216ENST00000489272 OR14I1A6ND48 311 aa6.24□□□□□ -1.41
CBWD1-216ENST00000489272 SNX17Q15036 470 aa6.24□□□□□ -1.41
CBWD1-216ENST00000489272 RSRP1Q9BUV0 290 aa6.24□□□□□ -1.41
CBWD1-216ENST00000489272 REV1Q9UBZ9 1251 aa6.24□□□□□ -1.41
CBWD1-216ENST00000489272 KLHL3Q9UH77 587 aa6.24□□□□□ -1.41
CBWD1-216ENST00000489272 DUSP13Q9UII6 198 aa6.24□□□□□ -1.41
CBWD1-216ENST00000489272 WASH4PA8MWX3 477 aa6.23□□□□□ -1.41
CBWD1-216ENST00000489272 HTR3BO95264 441 aa6.23□□□□□ -1.41
CBWD1-216ENST00000489272 KCNC1P48547 511 aa6.23□□□□□ -1.41
CBWD1-216ENST00000489272 TAGLNQ01995 201 aaKnown RBP6.23□□□□□ -1.41
CBWD1-216ENST00000489272 FAM160A1Q05DH4 1040 aa6.23□□□□□ -1.41
CBWD1-216ENST00000489272 MPP2Q14168 576 aa6.23□□□□□ -1.41
CBWD1-216ENST00000489272 TSPYL5Q86VY4 417 aaPredicted RBP6.23□□□□□ -1.41
CBWD1-216ENST00000489272 GOLM1Q8NBJ4 401 aa6.23□□□□□ -1.41
CBWD1-216ENST00000489272 CNTD2Q9H8S5 307 aa6.23□□□□□ -1.41
CBWD1-216ENST00000489272 POLR3KQ9Y2Y1 108 aaPredicted RBP6.23□□□□□ -1.41
CBWD1-216ENST00000489272 LTKP29376 864 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms