RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 TTF1Q15361 905 aaPredicted RBP7.89□□□□□ -1.15
PDCD4-209ENST00000489049 MCMDC2Q4G0Z9 681 aa7.89□□□□□ -1.15
PDCD4-209ENST00000489049 L1TD1Q5T7N2 865 aaKnown RBP7.89□□□□□ -1.15
PDCD4-209ENST00000489049 ZSCAN25Q6NSZ9 544 aa7.89□□□□□ -1.15
PDCD4-209ENST00000489049 PSAPL1Q6NUJ1 521 aa7.89□□□□□ -1.15
PDCD4-209ENST00000489049 TMED8Q6PL24 325 aaPredicted RBP7.89□□□□□ -1.15
PDCD4-209ENST00000489049 MARCH10Q8NA82 808 aaPredicted RBP7.89□□□□□ -1.15
PDCD4-209ENST00000489049 TMX3Q96JJ7 454 aa7.89□□□□□ -1.15
PDCD4-209ENST00000489049 PNMA5Q96PV4 448 aa7.89□□□□□ -1.15
PDCD4-209ENST00000489049 KRTAP4-8Q9BYQ9 185 aa7.89□□□□□ -1.15
PDCD4-209ENST00000489049 VRTNQ9H8Y1 702 aa7.89□□□□□ -1.15
PDCD4-209ENST00000489049 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.89□□□□□ -1.15
PDCD4-209ENST00000489049 SNX14Q9Y5W7 946 aa7.89□□□□□ -1.15
PDCD4-209ENST00000489049 KAT6BQ8WYB5 2073 aa7.88□□□□□ -1.15
PDCD4-209ENST00000489049 MED23Q9ULK4 1368 aa7.88□□□□□ -1.15
PDCD4-209ENST00000489049 WDR33Q9C0J8 1336 aaKnown RBP7.88□□□□□ -1.15
PDCD4-209ENST00000489049 IRS4O14654 1257 aaPredicted RBP7.88□□□□□ -1.15
PDCD4-209ENST00000489049 CYP2E1P05181 493 aaPredicted RBP7.88□□□□□ -1.15
PDCD4-209ENST00000489049 UQCRFS1P1P0C7P4 283 aa7.88□□□□□ -1.15
PDCD4-209ENST00000489049 IGFBP4P22692 258 aa7.88□□□□□ -1.15
PDCD4-209ENST00000489049 PIP4K2AP48426 406 aaPredicted RBP7.88□□□□□ -1.15
PDCD4-209ENST00000489049 AFF1P51825 1210 aaKnown RBP7.88□□□□□ -1.15
PDCD4-209ENST00000489049 CTSWP56202 376 aa7.88□□□□□ -1.15
PDCD4-209ENST00000489049 RAC1P63000 192 aa7.88□□□□□ -1.15
PDCD4-209ENST00000489049 DPYDQ12882 1025 aa7.88□□□□□ -1.15
PDCD4-209ENST00000489049 NMIQ13287 307 aaPredicted RBP7.88□□□□□ -1.15
PDCD4-209ENST00000489049 GORABQ5T7V8 394 aa7.88□□□□□ -1.15
PDCD4-209ENST00000489049 INTS5Q6P9B9 1019 aaKnown RBP7.88□□□□□ -1.15
PDCD4-209ENST00000489049 TTLL11Q8NHH1 800 aa7.88□□□□□ -1.15
PDCD4-209ENST00000489049 TNPO1Q92973 898 aaKnown RBP7.88□□□□□ -1.15
PDCD4-209ENST00000489049 SYTL4Q96C24 671 aaPredicted RBP7.88□□□□□ -1.15
PDCD4-209ENST00000489049 DSCC1Q9BVC3 393 aa7.88□□□□□ -1.15
PDCD4-209ENST00000489049 UTP14AQ9BVJ6 771 aaKnown RBP7.88□□□□□ -1.15
PDCD4-209ENST00000489049 BOLA2Q9H3K6 86 aa7.88□□□□□ -1.15
PDCD4-209ENST00000489049 PAG1Q9NWQ8 432 aa7.88□□□□□ -1.15
PDCD4-209ENST00000489049 TRMT112Q9UI30 125 aaKnown RBP7.88□□□□□ -1.15
PDCD4-209ENST00000489049 CTNNA3Q9UI47 895 aa7.88□□□□□ -1.15
PDCD4-209ENST00000489049 ATP6V1DQ9Y5K8 247 aa7.88□□□□□ -1.15
PDCD4-209ENST00000489049 TJP1Q07157 1748 aa7.87□□□□□ -1.15
PDCD4-209ENST00000489049 CNTNAP4Q9C0A0 1308 aa7.87□□□□□ -1.15
PDCD4-209ENST00000489049 RREB1Q92766 1687 aa7.87□□□□□ -1.15
PDCD4-209ENST00000489049 LGR5O75473 907 aa7.87□□□□□ -1.15
PDCD4-209ENST00000489049 IFIT1P09914 478 aaKnown RBP7.87□□□□□ -1.15
PDCD4-209ENST00000489049 PDCP20941 246 aa7.87□□□□□ -1.15
PDCD4-209ENST00000489049 GRNP28799 593 aaKnown RBP7.87□□□□□ -1.15
PDCD4-209ENST00000489049 CRKLP46109 303 aaKnown RBP7.87□□□□□ -1.15
PDCD4-209ENST00000489049 CCDC152Q4G0S7 254 aa7.87□□□□□ -1.15
PDCD4-209ENST00000489049 CREB3L3Q68CJ9 461 aa7.87□□□□□ -1.15
PDCD4-209ENST00000489049 LDHAL6AQ6ZMR3 332 aa7.87□□□□□ -1.15
PDCD4-209ENST00000489049 RUFY3Q7L099 469 aa7.87□□□□□ -1.15
PDCD4-209ENST00000489049 LENG1Q96BZ8 264 aaPredicted RBP7.87□□□□□ -1.15
PDCD4-209ENST00000489049 TTC14Q96N46 770 aa7.87□□□□□ -1.15
PDCD4-209ENST00000489049 NEUROD6Q96NK8 337 aa7.87□□□□□ -1.15
PDCD4-209ENST00000489049 CDC5LQ99459 802 aaKnown RBP7.87□□□□□ -1.15
PDCD4-209ENST00000489049 DBNDD2Q9BQY9 259 aa7.87□□□□□ -1.15
PDCD4-209ENST00000489049 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.87□□□□□ -1.15
PDCD4-209ENST00000489049 PDRG1Q9NUG6 133 aa7.87□□□□□ -1.15
PDCD4-209ENST00000489049 CCDC9Q9Y3X0 531 aaKnown RBP7.87□□□□□ -1.15
PDCD4-209ENST00000489049 RIPOR2Q9Y4F9 1068 aa7.87□□□□□ -1.15
PDCD4-209ENST00000489049 RBM8AQ9Y5S9 174 aaKnown RBP7.87□□□□□ -1.15
PDCD4-209ENST00000489049 ZNF609O15014 1411 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 A0A1B0GUL7 405 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 SCO2A0A1W2PP80 73 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 FAM196BA6NMK8 535 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 USP17L15C9J2P7 530 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 USP17L10C9JJH3 530 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 USP17L13C9JLJ4 530 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 USP17L12C9JPN9 530 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 USP17L11C9JVI0 530 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 USP17L21D6R901 530 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 USP17L18D6R9N7 530 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 USP17L22D6RA61 530 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 USP17L17D6RBQ6 530 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 USP17L19D6RCP7 530 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 USP17L20D6RJB6 530 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 RNF113AO15541 343 aaKnown RBP7.86□□□□□ -1.15
PDCD4-209ENST00000489049 TAF5LO75529 589 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 RGS9O75916 674 aaPredicted RBP7.86□□□□□ -1.15
PDCD4-209ENST00000489049 MAP4K4O95819 1239 aaPredicted RBP7.86□□□□□ -1.15
PDCD4-209ENST00000489049 EPB42P16452 691 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 NRG1Q02297 640 aaPredicted RBP7.86□□□□□ -1.15
PDCD4-209ENST00000489049 USP17L24Q0WX57 530 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 ATP2B3Q16720 1220 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 PRSS36Q5K4E3 855 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 TTC39AQ5SRH9 613 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 BLOC1S2Q6QNY1 142 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 SHISA2Q6UWI4 295 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 TXNRD3Q86VQ6 643 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 FMR1NBQ8N0W7 255 aaPredicted RBP7.86□□□□□ -1.15
PDCD4-209ENST00000489049 KLHDC4Q8TBB5 520 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 FAM89AQ96GI7 184 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 CNNM1Q9NRU3 951 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 TLR7Q9NYK1 1049 aaKnown RBP7.86□□□□□ -1.15
PDCD4-209ENST00000489049 ZBTB1Q9Y2K1 713 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 KIF3AQ9Y496 699 aa7.86□□□□□ -1.15
PDCD4-209ENST00000489049 RPAP1Q9BWH6 1393 aaPredicted RBP7.85□□□□□ -1.15
PDCD4-209ENST00000489049 ANKRD36CQ5JPF3 1778 aa7.85□□□□□ -1.15
PDCD4-209ENST00000489049 SLC27A2O14975 620 aa7.85□□□□□ -1.15
PDCD4-209ENST00000489049 CAMTA2O94983 1202 aa7.85□□□□□ -1.15
PDCD4-209ENST00000489049 PDE8BO95263 885 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms